RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 LY6G6EA0A0G2JKS1 128 aa16.3■□□□□ 0.2
COL1A1-205ENST00000476387 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.3■□□□□ 0.2
COL1A1-205ENST00000476387 LRRD1A4D1F6 860 aa16.3■□□□□ 0.2
COL1A1-205ENST00000476387 TPP1O14773 563 aa16.3■□□□□ 0.2
COL1A1-205ENST00000476387 AQP9O43315 295 aa16.3■□□□□ 0.2
COL1A1-205ENST00000476387 SPOPO43791 374 aa16.3■□□□□ 0.2
COL1A1-205ENST00000476387 TM7SF2O76062 418 aa16.3■□□□□ 0.2
COL1A1-205ENST00000476387 IPO7O95373 1038 aaKnown RBP16.3■□□□□ 0.2
COL1A1-205ENST00000476387 JUNDP17535 347 aa16.3■□□□□ 0.2
COL1A1-205ENST00000476387 MMP13P45452 471 aa16.3■□□□□ 0.2
COL1A1-205ENST00000476387 NOP2P46087 812 aaKnown RBP16.3■□□□□ 0.2
COL1A1-205ENST00000476387 YPEL5P62699 121 aa16.3■□□□□ 0.2
COL1A1-205ENST00000476387 PAFAH1B3Q15102 231 aaKnown RBP16.3■□□□□ 0.2
COL1A1-205ENST00000476387 UGP2Q16851 508 aa16.3■□□□□ 0.2
COL1A1-205ENST00000476387 TPRG1LQ5T0D9 272 aa16.3■□□□□ 0.2
COL1A1-205ENST00000476387 MARC1Q5VT66 337 aa16.3■□□□□ 0.2
COL1A1-205ENST00000476387 CDCP2Q5VXM1 449 aa16.3■□□□□ 0.2
COL1A1-205ENST00000476387 NCBP2-AS2Q69YL0 99 aa16.3■□□□□ 0.2
COL1A1-205ENST00000476387 PCDH19Q8TAB3 1148 aa16.3■□□□□ 0.2
COL1A1-205ENST00000476387 ZNF830Q96NB3 372 aaPredicted RBP16.3■□□□□ 0.2
COL1A1-205ENST00000476387 PANX2Q96RD6 677 aa16.3■□□□□ 0.2
COL1A1-205ENST00000476387 HAUS2Q9NVX0 235 aa16.3■□□□□ 0.2
COL1A1-205ENST00000476387 KLF15Q9UIH9 416 aa16.3■□□□□ 0.2
COL1A1-205ENST00000476387 ATP8A1Q9Y2Q0 1164 aa16.3■□□□□ 0.2
COL1A1-205ENST00000476387 U3KQA8 63 aa16.3■□□□□ 0.2
COL1A1-205ENST00000476387 FASNP49327 2511 aaKnown RBP16.3■□□□□ 0.2
COL1A1-205ENST00000476387 MUSKO15146 869 aa16.29■□□□□ 0.2
COL1A1-205ENST00000476387 OPA1O60313 960 aa16.29■□□□□ 0.2
COL1A1-205ENST00000476387 BUB1BO60566 1050 aaPredicted RBP16.29■□□□□ 0.2
COL1A1-205ENST00000476387 MMP20O60882 483 aa16.29■□□□□ 0.2
COL1A1-205ENST00000476387 NEBLO76041 1014 aa16.29■□□□□ 0.2
COL1A1-205ENST00000476387 KRT1P04264 644 aa16.29■□□□□ 0.2
COL1A1-205ENST00000476387 MX2P20592 715 aa16.29■□□□□ 0.2
COL1A1-205ENST00000476387 KDELR1P24390 212 aa16.29■□□□□ 0.2
COL1A1-205ENST00000476387 IGFALSP35858 605 aa16.29■□□□□ 0.2
COL1A1-205ENST00000476387 GARSP41250 739 aaKnown RBP16.29■□□□□ 0.2
COL1A1-205ENST00000476387 SLC1A1P43005 524 aa16.29■□□□□ 0.2
COL1A1-205ENST00000476387 THOP1P52888 689 aa16.29■□□□□ 0.2
COL1A1-205ENST00000476387 POLR2LP62875 67 aaKnown RBP16.29■□□□□ 0.2
COL1A1-205ENST00000476387 SEMG2Q02383 582 aa16.29■□□□□ 0.2
COL1A1-205ENST00000476387 GALNT2Q10471 571 aa16.29■□□□□ 0.2
COL1A1-205ENST00000476387 EIF2B5Q13144 721 aaKnown RBP16.29■□□□□ 0.2
COL1A1-205ENST00000476387 TMEM52BQ4KMG9 183 aa16.29■□□□□ 0.2
COL1A1-205ENST00000476387 TIGD7Q6NT04 549 aaPredicted RBP16.29■□□□□ 0.2
COL1A1-205ENST00000476387 GAS2L3Q86XJ1 694 aa16.29■□□□□ 0.2
COL1A1-205ENST00000476387 SNIP1Q8TAD8 396 aaKnown RBP16.29■□□□□ 0.2
COL1A1-205ENST00000476387 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.29■□□□□ 0.2
COL1A1-205ENST00000476387 FAF2Q96CS3 445 aa16.29■□□□□ 0.2
COL1A1-205ENST00000476387 MGME1Q9BQP7 344 aa16.29■□□□□ 0.2
COL1A1-205ENST00000476387 CAAP1Q9H8G2 361 aa16.29■□□□□ 0.2
COL1A1-205ENST00000476387 PCDH12Q9NPG4 1184 aa16.29■□□□□ 0.2
COL1A1-205ENST00000476387 SPASTQ9UBP0 616 aa16.29■□□□□ 0.2
COL1A1-205ENST00000476387 SALL4Q9UJQ4 1053 aa16.29■□□□□ 0.2
COL1A1-205ENST00000476387 LOC400499M0QZD8 3231 aa16.28■□□□□ 0.2
COL1A1-205ENST00000476387 LZTS3O60299 673 aaPredicted RBP16.28■□□□□ 0.2
COL1A1-205ENST00000476387 SOCS5O75159 536 aa16.28■□□□□ 0.2
COL1A1-205ENST00000476387 PEX11BO96011 259 aa16.28■□□□□ 0.2
COL1A1-205ENST00000476387 TNNT1P13805 278 aa16.28■□□□□ 0.2
COL1A1-205ENST00000476387 ITIH2P19823 946 aa16.28■□□□□ 0.2
COL1A1-205ENST00000476387 NFKBIAP25963 317 aa16.28■□□□□ 0.2
COL1A1-205ENST00000476387 MMP12P39900 470 aa16.28■□□□□ 0.2
COL1A1-205ENST00000476387 EIF2S3P41091 472 aaKnown RBP16.28■□□□□ 0.2
COL1A1-205ENST00000476387 TCEAL1Q15170 157 aa16.28■□□□□ 0.2
COL1A1-205ENST00000476387 IFI16Q16666 785 aaKnown RBP16.28■□□□□ 0.2
COL1A1-205ENST00000476387 RALGPS1Q5JS13 557 aa16.28■□□□□ 0.2
COL1A1-205ENST00000476387 LRRC38Q5VT99 294 aa16.28■□□□□ 0.2
COL1A1-205ENST00000476387 MACC1Q6ZN28 852 aa16.28■□□□□ 0.2
COL1A1-205ENST00000476387 RHOT1Q8IXI2 618 aa16.28■□□□□ 0.2
COL1A1-205ENST00000476387 TP53I13Q8NBR0 393 aaPredicted RBP16.28■□□□□ 0.2
COL1A1-205ENST00000476387 LMX1AQ8TE12 382 aa16.28■□□□□ 0.2
COL1A1-205ENST00000476387 RAPGEF5Q92565 580 aa16.28■□□□□ 0.2
COL1A1-205ENST00000476387 DEPDC7Q96QD5 511 aa16.28■□□□□ 0.2
COL1A1-205ENST00000476387 NUDCD1Q96RS6 583 aa16.28■□□□□ 0.2
COL1A1-205ENST00000476387 DDX56Q9NY93 547 aaKnown RBP16.28■□□□□ 0.2
COL1A1-205ENST00000476387 APOBEC3BQ9UH17 382 aaKnown RBP16.28■□□□□ 0.2
COL1A1-205ENST00000476387 PCDHA13Q9Y5I0 950 aa16.28■□□□□ 0.2
COL1A1-205ENST00000476387 PTPRQQ9UMZ3 2332 aa16.27■□□□□ 0.2
COL1A1-205ENST00000476387 A0A1W2PQ67 120 aa16.27■□□□□ 0.2
COL1A1-205ENST00000476387 ZNF487B1APH4 448 aa16.27■□□□□ 0.2
COL1A1-205ENST00000476387 RRP8O43159 456 aaKnown RBP16.27■□□□□ 0.2
COL1A1-205ENST00000476387 TLX3O43711 291 aaPredicted RBP16.27■□□□□ 0.2
COL1A1-205ENST00000476387 BRINP1O60477 761 aa16.27■□□□□ 0.2
COL1A1-205ENST00000476387 MAP3K6O95382 1288 aa16.27■□□□□ 0.2
COL1A1-205ENST00000476387 LCA5LO95447 670 aa16.27■□□□□ 0.2
COL1A1-205ENST00000476387 C6P13671 934 aa16.27■□□□□ 0.2
COL1A1-205ENST00000476387 HOXB3P14651 431 aaPredicted RBP16.27■□□□□ 0.2
COL1A1-205ENST00000476387 ABCG1P45844 678 aa16.27■□□□□ 0.2
COL1A1-205ENST00000476387 PEX5P50542 639 aa16.27■□□□□ 0.2
COL1A1-205ENST00000476387 MAXP61244 160 aa16.27■□□□□ 0.2
COL1A1-205ENST00000476387 KDM7AQ6ZMT4 941 aa16.27■□□□□ 0.2
COL1A1-205ENST00000476387 ZSWIM9Q86XI8 627 aa16.27■□□□□ 0.2
COL1A1-205ENST00000476387 VSIG1Q86XK7 387 aa16.27■□□□□ 0.2
COL1A1-205ENST00000476387 TMTC1Q8IUR5 882 aa16.27■□□□□ 0.2
COL1A1-205ENST00000476387 PHACTR4Q8IZ21 702 aa16.27■□□□□ 0.2
COL1A1-205ENST00000476387 PQLC3Q8N755 202 aa16.27■□□□□ 0.2
COL1A1-205ENST00000476387 IFI44Q8TCB0 444 aa16.27■□□□□ 0.2
COL1A1-205ENST00000476387 PDCD6IPQ8WUM4 868 aaKnown RBP16.27■□□□□ 0.2
COL1A1-205ENST00000476387 FGF11Q92914 225 aa16.27■□□□□ 0.2
COL1A1-205ENST00000476387 ECHDC3Q96DC8 303 aa16.27■□□□□ 0.2
COL1A1-205ENST00000476387 DCBLD2Q96PD2 775 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms