RNA–Protein interactions for RNA: ENST00000475307.1

GPM6B-208, Transcript of glycoprotein M6B, humanhuman

TSL 3

Gene GPM6B, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-208ENST00000475307 RD3Q7Z3Z2 195 aa11.52□□□□□ -0.57
GPM6B-208ENST00000475307 LRRC49Q8IUZ0 686 aa11.52□□□□□ -0.57
GPM6B-208ENST00000475307 HID1Q8IV36 788 aa11.52□□□□□ -0.57
GPM6B-208ENST00000475307 CNGA4Q8IV77 575 aa11.52□□□□□ -0.57
GPM6B-208ENST00000475307 PCDH19Q8TAB3 1148 aa11.52□□□□□ -0.57
GPM6B-208ENST00000475307 SLC35G2Q8TBE7 412 aa11.52□□□□□ -0.57
GPM6B-208ENST00000475307 ZNF670Q9BS34 389 aa11.52□□□□□ -0.57
GPM6B-208ENST00000475307 LRRC61Q9BV99 259 aa11.52□□□□□ -0.57
GPM6B-208ENST00000475307 USP29Q9HBJ7 922 aa11.52□□□□□ -0.57
GPM6B-208ENST00000475307 NOD2Q9HC29 1040 aa11.52□□□□□ -0.57
GPM6B-208ENST00000475307 NT5MQ9NPB1 228 aa11.52□□□□□ -0.57
GPM6B-208ENST00000475307 SPTLC3Q9NUV7 552 aa11.52□□□□□ -0.57
GPM6B-208ENST00000475307 B4GALT6Q9UBX8 382 aa11.52□□□□□ -0.57
GPM6B-208ENST00000475307 SALL4Q9UJQ4 1053 aa11.52□□□□□ -0.57
GPM6B-208ENST00000475307 DOLKQ9UPQ8 538 aa11.52□□□□□ -0.57
GPM6B-208ENST00000475307 OR1A2Q9Y585 309 aa11.52□□□□□ -0.57
GPM6B-208ENST00000475307 CPED1A4D0V7 1026 aa11.51□□□□□ -0.57
GPM6B-208ENST00000475307 AKR1B15C9JRZ8 316 aaPredicted RBP11.51□□□□□ -0.57
GPM6B-208ENST00000475307 CACNB4O00305 520 aaPredicted RBP11.51□□□□□ -0.57
GPM6B-208ENST00000475307 HTRA2O43464 458 aaPredicted RBP11.51□□□□□ -0.57
GPM6B-208ENST00000475307 GCATO75600 419 aa11.51□□□□□ -0.57
GPM6B-208ENST00000475307 RASGRP1O95267 797 aa11.51□□□□□ -0.57
GPM6B-208ENST00000475307 MT-CO3P00414 261 aa11.51□□□□□ -0.57
GPM6B-208ENST00000475307 CYP2A6P11509 494 aaPredicted RBP11.51□□□□□ -0.57
GPM6B-208ENST00000475307 TSHRP16473 764 aa11.51□□□□□ -0.57
GPM6B-208ENST00000475307 GARSP41250 739 aaKnown RBP11.51□□□□□ -0.57
GPM6B-208ENST00000475307 GALNT2Q10471 571 aa11.51□□□□□ -0.57
GPM6B-208ENST00000475307 TRAF2Q12933 501 aa11.51□□□□□ -0.57
GPM6B-208ENST00000475307 NR0B2Q15466 257 aa11.51□□□□□ -0.57
GPM6B-208ENST00000475307 IFI16Q16666 785 aaKnown RBP11.51□□□□□ -0.57
GPM6B-208ENST00000475307 CDKN3Q16667 212 aa11.51□□□□□ -0.57
GPM6B-208ENST00000475307 ALG11Q2TAA5 492 aa11.51□□□□□ -0.57
GPM6B-208ENST00000475307 DENND2CQ68D51 928 aa11.51□□□□□ -0.57
GPM6B-208ENST00000475307 PLA2G15Q8NCC3 412 aa11.51□□□□□ -0.57
GPM6B-208ENST00000475307 IFI44Q8TCB0 444 aa11.51□□□□□ -0.57
GPM6B-208ENST00000475307 RFFLQ8WZ73 363 aa11.51□□□□□ -0.57
GPM6B-208ENST00000475307 GLMNQ92990 594 aa11.51□□□□□ -0.57
GPM6B-208ENST00000475307 TSACCQ96A04 125 aaPredicted RBP11.51□□□□□ -0.57
GPM6B-208ENST00000475307 NXPE2Q96DL1 559 aa11.51□□□□□ -0.57
GPM6B-208ENST00000475307 TBATAQ96M53 351 aa11.51□□□□□ -0.57
GPM6B-208ENST00000475307 WDR92Q96MX6 357 aa11.51□□□□□ -0.57
GPM6B-208ENST00000475307 SEMA3CQ99985 751 aa11.51□□□□□ -0.57
GPM6B-208ENST00000475307 TRIM5Q9C035 493 aa11.51□□□□□ -0.57
GPM6B-208ENST00000475307 POLR1EQ9GZS1 481 aaKnown RBP11.51□□□□□ -0.57
GPM6B-208ENST00000475307 ABCG4Q9H172 646 aa11.51□□□□□ -0.57
GPM6B-208ENST00000475307 RBM22Q9NW64 420 aaKnown RBP eCLIP11.51□□□□□ -0.57
GPM6B-208ENST00000475307 NCKIPSDQ9NZQ3 722 aa11.51□□□□□ -0.57
GPM6B-208ENST00000475307 DKK4Q9UBT3 224 aa11.51□□□□□ -0.57
GPM6B-208ENST00000475307 KLQ9UEF7 1012 aa11.51□□□□□ -0.57
GPM6B-208ENST00000475307 PNMA8BQ9ULN7 279 aaPredicted RBP11.51□□□□□ -0.57
GPM6B-208ENST00000475307 PHTF1Q9UMS5 762 aa11.51□□□□□ -0.57
GPM6B-208ENST00000475307 TTLL3Q9Y4R7 772 aa11.51□□□□□ -0.57
GPM6B-208ENST00000475307 AK5Q9Y6K8 562 aa11.51□□□□□ -0.57
GPM6B-208ENST00000475307 DOCK9Q9BZ29 2069 aa11.5□□□□□ -0.57
GPM6B-208ENST00000475307 LY6G6EA0A0G2JKS1 128 aa11.5□□□□□ -0.57
GPM6B-208ENST00000475307 LRRD1A4D1F6 860 aa11.5□□□□□ -0.57
GPM6B-208ENST00000475307 LMO7DNF2Z398 122 aa11.5□□□□□ -0.57
GPM6B-208ENST00000475307 MATN3O15232 486 aa11.5□□□□□ -0.57
GPM6B-208ENST00000475307 YY2O15391 372 aa11.5□□□□□ -0.57
GPM6B-208ENST00000475307 OPA1O60313 960 aa11.5□□□□□ -0.57
GPM6B-208ENST00000475307 PGLSO95336 258 aa11.5□□□□□ -0.57
GPM6B-208ENST00000475307 TNFP01375 233 aa11.5□□□□□ -0.57
GPM6B-208ENST00000475307 GP1BAP07359 652 aa11.5□□□□□ -0.57
GPM6B-208ENST00000475307 ALPIP09923 528 aa11.5□□□□□ -0.57
GPM6B-208ENST00000475307 MX2P20592 715 aa11.5□□□□□ -0.57
GPM6B-208ENST00000475307 KDELR1P24390 212 aa11.5□□□□□ -0.57
GPM6B-208ENST00000475307 CCNCP24863 283 aa11.5□□□□□ -0.57
GPM6B-208ENST00000475307 VIPR1P32241 457 aa11.5□□□□□ -0.57
GPM6B-208ENST00000475307 ARHGAP25P42331 645 aa11.5□□□□□ -0.57
GPM6B-208ENST00000475307 RPIAP49247 311 aa11.5□□□□□ -0.57
GPM6B-208ENST00000475307 HK3P52790 923 aa11.5□□□□□ -0.57
GPM6B-208ENST00000475307 SRP54P61011 504 aaKnown RBP11.5□□□□□ -0.57
GPM6B-208ENST00000475307 ELOCQ15369 112 aa11.5□□□□□ -0.57
GPM6B-208ENST00000475307 TCEA2Q15560 299 aa11.5□□□□□ -0.57
GPM6B-208ENST00000475307 ODF2Q5BJF6 829 aa11.5□□□□□ -0.57
GPM6B-208ENST00000475307 ARMC12Q5T9G4 340 aa11.5□□□□□ -0.57
GPM6B-208ENST00000475307 EFL1Q7Z2Z2 1120 aaKnown RBP11.5□□□□□ -0.57
GPM6B-208ENST00000475307 RHOT2Q8IXI1 618 aa11.5□□□□□ -0.57
GPM6B-208ENST00000475307 NDUFAF2Q8N183 169 aa11.5□□□□□ -0.57
GPM6B-208ENST00000475307 CACTIN-AS1Q8N1I8 211 aa11.5□□□□□ -0.57
GPM6B-208ENST00000475307 FSTL5Q8N475 847 aaPredicted RBP11.5□□□□□ -0.57
GPM6B-208ENST00000475307 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.5□□□□□ -0.57
GPM6B-208ENST00000475307 TEX26Q8N6G2 289 aa11.5□□□□□ -0.57
GPM6B-208ENST00000475307 MAPK15Q8TD08 544 aa11.5□□□□□ -0.57
GPM6B-208ENST00000475307 SCG3Q8WXD2 468 aaKnown RBP11.5□□□□□ -0.57
GPM6B-208ENST00000475307 SPOCK2Q92563 424 aa11.5□□□□□ -0.57
GPM6B-208ENST00000475307 RAPGEF5Q92565 580 aa11.5□□□□□ -0.57
GPM6B-208ENST00000475307 FUBP1Q96AE4 644 aaKnown RBP11.5□□□□□ -0.57
GPM6B-208ENST00000475307 FAF2Q96CS3 445 aa11.5□□□□□ -0.57
GPM6B-208ENST00000475307 CLPBQ9H078 707 aa11.5□□□□□ -0.57
GPM6B-208ENST00000475307 HAUS2Q9NVX0 235 aa11.5□□□□□ -0.57
GPM6B-208ENST00000475307 RAXQ9Y2V3 346 aa11.5□□□□□ -0.57
GPM6B-208ENST00000475307 RAI2Q9Y5P3 530 aa11.5□□□□□ -0.57
GPM6B-208ENST00000475307 U3KQA8 63 aa11.5□□□□□ -0.57
GPM6B-208ENST00000475307 TRPM6Q9BX84 2022 aa11.5□□□□□ -0.57
GPM6B-208ENST00000475307 HEXIM1O94992 359 aaKnown RBP11.49□□□□□ -0.57
GPM6B-208ENST00000475307 CELA2BP08218 269 aaPredicted RBP11.49□□□□□ -0.57
GPM6B-208ENST00000475307 KRT10P13645 584 aa11.49□□□□□ -0.57
GPM6B-208ENST00000475307 CTPS1P17812 591 aa11.49□□□□□ -0.57
GPM6B-208ENST00000475307 GM2AP17900 193 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms