RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 ETNPPLQ8TBG4 499 aa3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 SMARCE1Q969G3 411 aa3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 ZUFSPQ96AP4 578 aa3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 MTBPQ96DY7 904 aa3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 ZNF570Q96NI8 536 aa3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 NR1H4Q96RI1 486 aaPredicted RBP3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 EIF2AK1Q9BQI3 630 aaKnown RBP3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 IRAK4Q9NWZ3 460 aa3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 ZNF112Q9UJU3 913 aa3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 AAR2Q9Y312 384 aaKnown RBP3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 NFE2L3Q9Y4A8 694 aa3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 SCINQ9Y6U3 715 aa3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 ATXN2Q99700 1313 aaKnown RBP3.38□□□□□ -1.87
ECHDC1-213ENST00000474240 A0A1W2PPH5 198 aa3.37□□□□□ -1.87
ECHDC1-213ENST00000474240 CLEC18AA5D8T8 446 aa3.37□□□□□ -1.87
ECHDC1-213ENST00000474240 GOLGA6L9A6NEM1 432 aa3.37□□□□□ -1.87
ECHDC1-213ENST00000474240 EIF3CLB5ME19 914 aaKnown RBP3.37□□□□□ -1.87
ECHDC1-213ENST00000474240 TIPRLO75663 272 aa3.37□□□□□ -1.87
ECHDC1-213ENST00000474240 CDH2P19022 906 aaPredicted RBP3.37□□□□□ -1.87
ECHDC1-213ENST00000474240 AGAP20933 346 aa3.37□□□□□ -1.87
ECHDC1-213ENST00000474240 RRM1P23921 792 aa3.37□□□□□ -1.87
ECHDC1-213ENST00000474240 CHMP24386 653 aa3.37□□□□□ -1.87
ECHDC1-213ENST00000474240 CLDN2P57739 230 aa3.37□□□□□ -1.87
ECHDC1-213ENST00000474240 NANOS2P60321 138 aaKnown RBP3.37□□□□□ -1.87
ECHDC1-213ENST00000474240 TDGQ13569 410 aa3.37□□□□□ -1.87
ECHDC1-213ENST00000474240 CTTNQ14247 550 aaKnown RBP3.37□□□□□ -1.87
ECHDC1-213ENST00000474240 CALCRLQ16602 461 aa3.37□□□□□ -1.87
ECHDC1-213ENST00000474240 SOWAHAQ2M3V2 549 aa3.37□□□□□ -1.87
ECHDC1-213ENST00000474240 USP41Q3LFD5 358 aa3.37□□□□□ -1.87
ECHDC1-213ENST00000474240 DPCR1Q3MIW9 517 aa3.37□□□□□ -1.87
ECHDC1-213ENST00000474240 SLC9B1Q4ZJI4 515 aa3.37□□□□□ -1.87
ECHDC1-213ENST00000474240 FAAH2Q6GMR7 532 aa3.37□□□□□ -1.87
ECHDC1-213ENST00000474240 PLEKHA7Q6IQ23 1121 aa3.37□□□□□ -1.87
ECHDC1-213ENST00000474240 CDC73Q6P1J9 531 aa3.37□□□□□ -1.87
ECHDC1-213ENST00000474240 METTL2BQ6P1Q9 378 aaKnown RBP3.37□□□□□ -1.87
ECHDC1-213ENST00000474240 ATF7IPQ6VMQ6 1270 aa3.37□□□□□ -1.87
ECHDC1-213ENST00000474240 CREB3L2Q70SY1 520 aa3.37□□□□□ -1.87
ECHDC1-213ENST00000474240 CLIP4Q8N3C7 705 aa3.37□□□□□ -1.87
ECHDC1-213ENST00000474240 CLEC18CQ8NCF0 446 aa3.37□□□□□ -1.87
ECHDC1-213ENST00000474240 CADM4Q8NFZ8 388 aa3.37□□□□□ -1.87
ECHDC1-213ENST00000474240 RRP36Q96EU6 259 aaKnown RBP3.37□□□□□ -1.87
ECHDC1-213ENST00000474240 MED30Q96HR3 178 aa3.37□□□□□ -1.87
ECHDC1-213ENST00000474240 METTL2AQ96IZ6 378 aaKnown RBP3.37□□□□□ -1.87
ECHDC1-213ENST00000474240 ZNF479Q96JC4 524 aa3.37□□□□□ -1.87
ECHDC1-213ENST00000474240 OR1F2PQ96R84 312 aa3.37□□□□□ -1.87
ECHDC1-213ENST00000474240 MAP7D2Q96T17 732 aa3.37□□□□□ -1.87
ECHDC1-213ENST00000474240 IFIH1Q9BYX4 1025 aaKnown RBP3.37□□□□□ -1.87
ECHDC1-213ENST00000474240 PLEKHA4Q9H4M7 779 aa3.37□□□□□ -1.87
ECHDC1-213ENST00000474240 MAGEE1Q9HCI5 957 aa3.37□□□□□ -1.87
ECHDC1-213ENST00000474240 ASAH2Q9NR71 780 aa3.37□□□□□ -1.87
ECHDC1-213ENST00000474240 ERVK-11Q9UQG0 969 aa3.37□□□□□ -1.87
ECHDC1-213ENST00000474240 DYTNA2CJ06 578 aa3.36□□□□□ -1.87
ECHDC1-213ENST00000474240 BCAT2O15382 392 aaPredicted RBP3.36□□□□□ -1.87
ECHDC1-213ENST00000474240 SEC14L5O43304 696 aa3.36□□□□□ -1.87
ECHDC1-213ENST00000474240 KLK8O60259 260 aa3.36□□□□□ -1.87
ECHDC1-213ENST00000474240 RGS11O94810 467 aa3.36□□□□□ -1.87
ECHDC1-213ENST00000474240 RTN3O95197 1032 aaPredicted RBP3.36□□□□□ -1.87
ECHDC1-213ENST00000474240 IGHV4-30-4P0DP06 118 aa3.36□□□□□ -1.87
ECHDC1-213ENST00000474240 ITGAXP20702 1163 aa3.36□□□□□ -1.87
ECHDC1-213ENST00000474240 RFX5P48382 616 aaPredicted RBP3.36□□□□□ -1.87
ECHDC1-213ENST00000474240 GNAQP50148 359 aa3.36□□□□□ -1.87
ECHDC1-213ENST00000474240 CCR9P51686 369 aa3.36□□□□□ -1.87
ECHDC1-213ENST00000474240 ART1P52961 327 aa3.36□□□□□ -1.87
ECHDC1-213ENST00000474240 PMS2P54278 862 aa3.36□□□□□ -1.87
ECHDC1-213ENST00000474240 ZBED6P86452 979 aa3.36□□□□□ -1.87
ECHDC1-213ENST00000474240 DDX10Q13206 875 aaKnown RBP3.36□□□□□ -1.87
ECHDC1-213ENST00000474240 G3BP1Q13283 466 aaKnown RBP eCLIP3.36□□□□□ -1.87
ECHDC1-213ENST00000474240 OLIG2Q13516 323 aa3.36□□□□□ -1.87
ECHDC1-213ENST00000474240 KEAP1Q14145 624 aa3.36□□□□□ -1.87
ECHDC1-213ENST00000474240 H1FNTQ75WM6 255 aaPredicted RBP3.36□□□□□ -1.87
ECHDC1-213ENST00000474240 METTL6Q8TCB7 284 aa3.36□□□□□ -1.87
ECHDC1-213ENST00000474240 GPT2Q8TD30 523 aa3.36□□□□□ -1.87
ECHDC1-213ENST00000474240 SGCDQ92629 289 aa3.36□□□□□ -1.87
ECHDC1-213ENST00000474240 RTP4Q96DX8 246 aa3.36□□□□□ -1.87
ECHDC1-213ENST00000474240 MPP4Q96JB8 637 aa3.36□□□□□ -1.87
ECHDC1-213ENST00000474240 HARBI1Q96MB7 349 aa3.36□□□□□ -1.87
ECHDC1-213ENST00000474240 ZNF385AQ96PM9 386 aaKnown RBP3.36□□□□□ -1.87
ECHDC1-213ENST00000474240 MPHOSPH8Q99549 860 aa3.36□□□□□ -1.87
ECHDC1-213ENST00000474240 STRA6Q9BX79 667 aa3.36□□□□□ -1.87
ECHDC1-213ENST00000474240 NUF2Q9BZD4 464 aa3.36□□□□□ -1.87
ECHDC1-213ENST00000474240 SLC25A18Q9H1K4 315 aa3.36□□□□□ -1.87
ECHDC1-213ENST00000474240 TTYH1Q9H313 450 aaPredicted RBP3.36□□□□□ -1.87
ECHDC1-213ENST00000474240 C6orf106Q9H6K1 298 aaPredicted RBP3.36□□□□□ -1.87
ECHDC1-213ENST00000474240 CISD1Q9NZ45 108 aaKnown RBP3.36□□□□□ -1.87
ECHDC1-213ENST00000474240 HAO1Q9UJM8 370 aa3.36□□□□□ -1.87
ECHDC1-213ENST00000474240 CAMK2AQ9UQM7 478 aa3.36□□□□□ -1.87
ECHDC1-213ENST00000474240 TDRD9Q8NDG6 1382 aaKnown RBP3.36□□□□□ -1.87
ECHDC1-213ENST00000474240 TMEM202A6NGA9 273 aa3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 B4E171 279 aa3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 AKR1B15C9JRZ8 316 aaPredicted RBP3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 NPIPB11E5RHQ5 1161 aa3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 TIMM23O14925 209 aa3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 SCGB1D1O95968 90 aa3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 CLEC3BP05452 202 aa3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 ACAA1P09110 424 aaPredicted RBP3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 UBL4AP11441 157 aa3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 FGF3P11487 239 aaPredicted RBP3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 STX2P32856 288 aa3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 TSPAN7P41732 249 aa3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 CXCR3P49682 368 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms