RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 LRRC73Q5JTD7 316 aa10.3□□□□□ -0.76
CDHR3-209ENST00000472116 EFHC1Q5JVL4 640 aa10.3□□□□□ -0.76
CDHR3-209ENST00000472116 C1orf220Q5T0J3 134 aa10.3□□□□□ -0.76
CDHR3-209ENST00000472116 SLC6A19Q695T7 634 aa10.3□□□□□ -0.76
CDHR3-209ENST00000472116 CNNM4Q6P4Q7 775 aa10.3□□□□□ -0.76
CDHR3-209ENST00000472116 TMEM174Q8WUU8 243 aa10.3□□□□□ -0.76
CDHR3-209ENST00000472116 OR1E3Q8WZA6 343 aa10.3□□□□□ -0.76
CDHR3-209ENST00000472116 DHX58Q96C10 678 aa10.3□□□□□ -0.76
CDHR3-209ENST00000472116 SNRNP40Q96DI7 357 aaKnown RBP10.3□□□□□ -0.76
CDHR3-209ENST00000472116 KLHL32Q96NJ5 620 aa10.3□□□□□ -0.76
CDHR3-209ENST00000472116 POPDC2Q9HBU9 364 aa10.3□□□□□ -0.76
CDHR3-209ENST00000472116 ASF1BQ9NVP2 202 aa10.3□□□□□ -0.76
CDHR3-209ENST00000472116 DDIT4Q9NX09 232 aa10.3□□□□□ -0.76
CDHR3-209ENST00000472116 RAB20Q9NX57 234 aa10.3□□□□□ -0.76
CDHR3-209ENST00000472116 NIPBLQ6KC79 2804 aaeCLIP10.29□□□□□ -0.76
CDHR3-209ENST00000472116 PDE2AO00408 941 aaPredicted RBP10.29□□□□□ -0.76
CDHR3-209ENST00000472116 PDXKO00764 312 aa10.29□□□□□ -0.76
CDHR3-209ENST00000472116 LRRTM2O43300 516 aa10.29□□□□□ -0.76
CDHR3-209ENST00000472116 STX10O60499 249 aa10.29□□□□□ -0.76
CDHR3-209ENST00000472116 ECEL1O95672 775 aa10.29□□□□□ -0.76
CDHR3-209ENST00000472116 COX6B1P14854 86 aa10.29□□□□□ -0.76
CDHR3-209ENST00000472116 HOXB4P17483 251 aaPredicted RBP10.29□□□□□ -0.76
CDHR3-209ENST00000472116 GTF2H1P32780 548 aa10.29□□□□□ -0.76
CDHR3-209ENST00000472116 ACADSBP45954 432 aa10.29□□□□□ -0.76
CDHR3-209ENST00000472116 MXI1P50539 228 aa10.29□□□□□ -0.76
CDHR3-209ENST00000472116 IRAK1P51617 712 aa10.29□□□□□ -0.76
CDHR3-209ENST00000472116 ITGA1P56199 1179 aa10.29□□□□□ -0.76
CDHR3-209ENST00000472116 SNRPD1P62314 119 aaKnown RBP10.29□□□□□ -0.76
CDHR3-209ENST00000472116 CEBPZQ03701 1054 aaKnown RBP10.29□□□□□ -0.76
CDHR3-209ENST00000472116 RAD51Q06609 339 aa10.29□□□□□ -0.76
CDHR3-209ENST00000472116 FOXM1Q08050 763 aa10.29□□□□□ -0.76
CDHR3-209ENST00000472116 ELP6Q0PNE2 266 aa10.29□□□□□ -0.76
CDHR3-209ENST00000472116 WSCD2Q2TBF2 565 aa10.29□□□□□ -0.76
CDHR3-209ENST00000472116 PAPD7Q5XG87 772 aaKnown RBP10.29□□□□□ -0.76
CDHR3-209ENST00000472116 IQUBQ8NA54 791 aa10.29□□□□□ -0.76
CDHR3-209ENST00000472116 Q8NA96 180 aa10.29□□□□□ -0.76
CDHR3-209ENST00000472116 OR6K2Q8NGY2 324 aa10.29□□□□□ -0.76
CDHR3-209ENST00000472116 C19orf60Q96EN9 201 aa10.29□□□□□ -0.76
CDHR3-209ENST00000472116 EEF2KMTQ96G04 330 aa10.29□□□□□ -0.76
CDHR3-209ENST00000472116 C7orf25Q9BPX7 421 aa10.29□□□□□ -0.76
CDHR3-209ENST00000472116 SIK2Q9H0K1 926 aa10.29□□□□□ -0.76
CDHR3-209ENST00000472116 FGF22Q9HCT0 170 aa10.29□□□□□ -0.76
CDHR3-209ENST00000472116 ATP13A1Q9HD20 1204 aa10.29□□□□□ -0.76
CDHR3-209ENST00000472116 APMAPQ9HDC9 416 aa10.29□□□□□ -0.76
CDHR3-209ENST00000472116 MLXIPLQ9NP71 852 aa10.29□□□□□ -0.76
CDHR3-209ENST00000472116 TMEM9Q9P0T7 183 aa10.29□□□□□ -0.76
CDHR3-209ENST00000472116 COPG2Q9UBF2 871 aa10.29□□□□□ -0.76
CDHR3-209ENST00000472116 COQ6Q9Y2Z9 468 aa10.29□□□□□ -0.76
CDHR3-209ENST00000472116 FCF1Q9Y324 198 aaKnown RBP10.29□□□□□ -0.76
CDHR3-209ENST00000472116 A0A0D9SEW6 157 aa10.28□□□□□ -0.76
CDHR3-209ENST00000472116 PVALEFA0A1B0GWK0 134 aa10.28□□□□□ -0.76
CDHR3-209ENST00000472116 ZSCAN5CA6NGD5 496 aaPredicted RBP10.28□□□□□ -0.76
CDHR3-209ENST00000472116 ARGFXA6NJG6 315 aa10.28□□□□□ -0.76
CDHR3-209ENST00000472116 TNFRSF10CO14798 259 aa10.28□□□□□ -0.76
CDHR3-209ENST00000472116 ZNF821O75541 412 aaPredicted RBP10.28□□□□□ -0.76
CDHR3-209ENST00000472116 FAM155BO75949 473 aa10.28□□□□□ -0.76
CDHR3-209ENST00000472116 POP4O95707 220 aaKnown RBP10.28□□□□□ -0.76
CDHR3-209ENST00000472116 IGLV3-25P01717 112 aa10.28□□□□□ -0.76
CDHR3-209ENST00000472116 MT-ND3P03897 115 aa10.28□□□□□ -0.76
CDHR3-209ENST00000472116 CCNB1P14635 433 aa10.28□□□□□ -0.76
CDHR3-209ENST00000472116 CD1EP15812 388 aa10.28□□□□□ -0.76
CDHR3-209ENST00000472116 OR1E1P30953 314 aa10.28□□□□□ -0.76
CDHR3-209ENST00000472116 GGCXP38435 758 aa10.28□□□□□ -0.76
CDHR3-209ENST00000472116 GARSP41250 739 aaKnown RBP10.28□□□□□ -0.76
CDHR3-209ENST00000472116 GEMIN4P57678 1058 aaKnown RBP10.28□□□□□ -0.76
CDHR3-209ENST00000472116 KIAA1024LP59773 190 aa10.28□□□□□ -0.76
CDHR3-209ENST00000472116 YWHAZP63104 245 aaKnown RBP10.28□□□□□ -0.76
CDHR3-209ENST00000472116 ENPEPQ07075 957 aa10.28□□□□□ -0.76
CDHR3-209ENST00000472116 DPYDQ12882 1025 aa10.28□□□□□ -0.76
CDHR3-209ENST00000472116 CHAF1BQ13112 559 aa10.28□□□□□ -0.76
CDHR3-209ENST00000472116 DNASE1L3Q13609 305 aa10.28□□□□□ -0.76
CDHR3-209ENST00000472116 CUL2Q13617 745 aa10.28□□□□□ -0.76
CDHR3-209ENST00000472116 ANKRD40Q6AI12 368 aa10.28□□□□□ -0.76
CDHR3-209ENST00000472116 FOXR2Q6PJQ5 311 aa10.28□□□□□ -0.76
CDHR3-209ENST00000472116 LRRC31Q6UY01 552 aa10.28□□□□□ -0.76
CDHR3-209ENST00000472116 C17orf82Q86X59 251 aaPredicted RBP10.28□□□□□ -0.76
CDHR3-209ENST00000472116 PLPP6Q8IY26 295 aa10.28□□□□□ -0.76
CDHR3-209ENST00000472116 FAM186BQ8IYM0 893 aa10.28□□□□□ -0.76
CDHR3-209ENST00000472116 CISD2Q8N5K1 135 aaKnown RBP10.28□□□□□ -0.76
CDHR3-209ENST00000472116 GALNT6Q8NCL4 622 aa10.28□□□□□ -0.76
CDHR3-209ENST00000472116 CCL4L1Q8NHW4 92 aa10.28□□□□□ -0.76
CDHR3-209ENST00000472116 MED15Q96RN5 788 aa10.28□□□□□ -0.76
CDHR3-209ENST00000472116 SLC38A3Q99624 504 aa10.28□□□□□ -0.76
CDHR3-209ENST00000472116 REPIN1Q9BWE0 567 aaKnown RBP10.28□□□□□ -0.76
CDHR3-209ENST00000472116 ING2Q9H160 280 aa10.28□□□□□ -0.76
CDHR3-209ENST00000472116 BLZF1Q9H2G9 400 aa10.28□□□□□ -0.76
CDHR3-209ENST00000472116 SUDS3Q9H7L9 328 aaPredicted RBP10.28□□□□□ -0.76
CDHR3-209ENST00000472116 MAGEF1Q9HAY2 307 aa10.28□□□□□ -0.76
CDHR3-209ENST00000472116 AGPAT4Q9NRZ5 378 aa10.28□□□□□ -0.76
CDHR3-209ENST00000472116 SPATS2LQ9NUQ6 558 aaKnown RBP10.28□□□□□ -0.76
CDHR3-209ENST00000472116 TAAR2Q9P1P5 351 aa10.28□□□□□ -0.76
CDHR3-209ENST00000472116 SMC3Q9UQE7 1217 aa10.28□□□□□ -0.76
CDHR3-209ENST00000472116 HS3ST4Q9Y661 456 aa10.28□□□□□ -0.76
CDHR3-209ENST00000472116 TMEM202A6NGA9 273 aa10.27□□□□□ -0.77
CDHR3-209ENST00000472116 ZG16O60844 167 aa10.27□□□□□ -0.77
CDHR3-209ENST00000472116 FGF1P05230 155 aa10.27□□□□□ -0.77
CDHR3-209ENST00000472116 SNRPB2P08579 225 aaKnown RBP10.27□□□□□ -0.77
CDHR3-209ENST00000472116 PAEPP09466 180 aa10.27□□□□□ -0.77
CDHR3-209ENST00000472116 PDIA4P13667 645 aaKnown RBP10.27□□□□□ -0.77
CDHR3-209ENST00000472116 CAPN3P20807 821 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms