RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 TMEM164Q5U3C3 297 aa5.93□□□□□ -1.46
VARS-222ENST00000470953 TAF3Q5VWG9 929 aa5.93□□□□□ -1.46
VARS-222ENST00000470953 PM20D1Q6GTS8 502 aa5.93□□□□□ -1.46
VARS-222ENST00000470953 ESRP1Q6NXG1 681 aaKnown RBP5.93□□□□□ -1.46
VARS-222ENST00000470953 LINGO4Q6UY18 593 aa5.93□□□□□ -1.46
VARS-222ENST00000470953 KYAT3Q6YP21 454 aaKnown RBP5.93□□□□□ -1.46
VARS-222ENST00000470953 C11orf57Q6ZUT1 292 aaPredicted RBP5.93□□□□□ -1.46
VARS-222ENST00000470953 BHLHA9Q7RTU4 235 aa5.93□□□□□ -1.46
VARS-222ENST00000470953 FJX1Q86VR8 437 aa5.93□□□□□ -1.46
VARS-222ENST00000470953 CHSY1Q86X52 802 aa5.93□□□□□ -1.46
VARS-222ENST00000470953 DCP2Q8IU60 420 aaKnown RBP5.93□□□□□ -1.46
VARS-222ENST00000470953 UNC45BQ8IWX7 931 aa5.93□□□□□ -1.46
VARS-222ENST00000470953 PHACTR4Q8IZ21 702 aa5.93□□□□□ -1.46
VARS-222ENST00000470953 CFAP52Q8N1V2 620 aa5.93□□□□□ -1.46
VARS-222ENST00000470953 CARNMT1Q8N4J0 409 aa5.93□□□□□ -1.46
VARS-222ENST00000470953 AOPEPQ8N6M6 819 aa5.93□□□□□ -1.46
VARS-222ENST00000470953 HJURPQ8NCD3 748 aaPredicted RBP5.93□□□□□ -1.46
VARS-222ENST00000470953 TMEM35BQ8NCS4 154 aa5.93□□□□□ -1.46
VARS-222ENST00000470953 NEK11Q8NG66 645 aa5.93□□□□□ -1.46
VARS-222ENST00000470953 ENOX1Q8TC92 643 aaKnown RBP5.93□□□□□ -1.46
VARS-222ENST00000470953 CLEC4CQ8WTT0 213 aa5.93□□□□□ -1.46
VARS-222ENST00000470953 CHTF18Q8WVB6 975 aa5.93□□□□□ -1.46
VARS-222ENST00000470953 ZNF606Q8WXB4 792 aa5.93□□□□□ -1.46
VARS-222ENST00000470953 SHC3Q92529 594 aa5.93□□□□□ -1.46
VARS-222ENST00000470953 ART4Q93070 314 aa5.93□□□□□ -1.46
VARS-222ENST00000470953 TMEM159Q96B96 161 aa5.93□□□□□ -1.46
VARS-222ENST00000470953 TAAR9Q96RI9 348 aa5.93□□□□□ -1.46
VARS-222ENST00000470953 KLF6Q99612 283 aaPredicted RBP5.93□□□□□ -1.46
VARS-222ENST00000470953 NUDT22Q9BRQ3 303 aa5.93□□□□□ -1.46
VARS-222ENST00000470953 TRIM55Q9BYV6 548 aa5.93□□□□□ -1.46
VARS-222ENST00000470953 SPRY4Q9C004 299 aa5.93□□□□□ -1.46
VARS-222ENST00000470953 VPS16Q9H269 839 aa5.93□□□□□ -1.46
VARS-222ENST00000470953 FAM207AQ9NSI2 230 aaPredicted RBP5.93□□□□□ -1.46
VARS-222ENST00000470953 SAMSN1Q9NSI8 373 aaKnown RBP5.93□□□□□ -1.46
VARS-222ENST00000470953 CCM2LQ9NUG4 571 aaPredicted RBP5.93□□□□□ -1.46
VARS-222ENST00000470953 SLC12A6Q9UHW9 1150 aa5.93□□□□□ -1.46
VARS-222ENST00000470953 IPO11Q9UI26 975 aaKnown RBP5.93□□□□□ -1.46
VARS-222ENST00000470953 PCDHGA3Q9Y5H0 932 aa5.93□□□□□ -1.46
VARS-222ENST00000470953 FHOD1Q9Y613 1164 aa5.93□□□□□ -1.46
VARS-222ENST00000470953 MDC1Q14676 2089 aaKnown RBP5.92□□□□□ -1.46
VARS-222ENST00000470953 FAM170AA1A519 330 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 ZSCAN5CA6NGD5 496 aaPredicted RBP5.92□□□□□ -1.46
VARS-222ENST00000470953 F5H5T6 163 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 F8VZ95 297 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 SPRY1O43609 319 aaPredicted RBP5.92□□□□□ -1.46
VARS-222ENST00000470953 HSF2BPO75031 334 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 GRAP2O75791 330 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 PCDH8O95206 1070 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 LATS1O95835 1130 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 LY6G6DO95868 133 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 INHBBP09529 407 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 PNMA6AP0CW24 399 aaPredicted RBP5.92□□□□□ -1.46
VARS-222ENST00000470953 SLC2A3P11169 496 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 UCHL3P15374 230 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 DESP17661 470 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 HNRNPH3P31942 346 aaKnown RBP5.92□□□□□ -1.46
VARS-222ENST00000470953 ABL2P42684 1182 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 RABIFP47224 123 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 PGDP52209 483 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 PMS2P54278 862 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 ITGA1P56199 1179 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 PFN3P60673 137 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 ADAM8P78325 824 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 CDK17Q00537 523 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 UBXN1Q04323 297 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 KRT31Q15323 416 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 ANO6Q4KMQ2 910 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 FILIP1LQ4L180 1135 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 MPP7Q5T2T1 576 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 FAM102AQ5T9C2 384 aaPredicted RBP5.92□□□□□ -1.46
VARS-222ENST00000470953 RNF219Q5W0B1 726 aaPredicted RBP5.92□□□□□ -1.46
VARS-222ENST00000470953 ANKS6Q68DC2 871 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 KCTD16Q68DU8 428 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 SLC6A19Q695T7 634 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 MSANTD2Q6P1R3 559 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 NEK5Q6P3R8 708 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 SPRED1Q7Z699 444 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 TAC4Q86UU9 113 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 SLC47A2Q86VL8 602 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 IRF2BP1Q8IU81 584 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 ULK2Q8IYT8 1036 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 SCML4Q8N228 414 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 CISD2Q8N5K1 135 aaKnown RBP5.92□□□□□ -1.46
VARS-222ENST00000470953 ZNF557Q8N988 423 aaPredicted RBP5.92□□□□□ -1.46
VARS-222ENST00000470953 DQX1Q8TE96 717 aaKnown RBP5.92□□□□□ -1.46
VARS-222ENST00000470953 SLC35F5Q8WV83 523 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 C18orf12Q96KH6 178 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 SLC17A9Q9BYT1 436 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 POPDC2Q9HBU9 364 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 ACP6Q9NPH0 428 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 PLCB1Q9NQ66 1216 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 FANCLQ9NW38 375 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 DDIT4Q9NX09 232 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 OCIAD1Q9NX40 245 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 RCOR3Q9P2K3 495 aaPredicted RBP5.92□□□□□ -1.46
VARS-222ENST00000470953 STAP1Q9ULZ2 295 aa5.92□□□□□ -1.46
VARS-222ENST00000470953 PRKDCP78527 4128 aaKnown RBP5.92□□□□□ -1.46
VARS-222ENST00000470953 IGHV5-10-1A0A0J9YXX1 117 aa5.91□□□□□ -1.46
VARS-222ENST00000470953 ANKRD62A6NC57 917 aa5.91□□□□□ -1.46
VARS-222ENST00000470953 SMTNL1A8MU46 457 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms