RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 GJA4P35212 333 aa8.37□□□□□ -1.07
GTF3A-206ENST00000470606 CA5AP35218 305 aa8.37□□□□□ -1.07
GTF3A-206ENST00000470606 RPA3P35244 121 aaPredicted RBP8.37□□□□□ -1.07
GTF3A-206ENST00000470606 MDH1P40925 334 aaKnown RBP8.37□□□□□ -1.07
GTF3A-206ENST00000470606 SLC1A2P43004 574 aa8.37□□□□□ -1.07
GTF3A-206ENST00000470606 SOX9P48436 509 aa8.37□□□□□ -1.07
GTF3A-206ENST00000470606 CSRP3P50461 194 aa8.37□□□□□ -1.07
GTF3A-206ENST00000470606 CCNHP51946 323 aaPredicted RBP8.37□□□□□ -1.07
GTF3A-206ENST00000470606 METAP1P53582 386 aa8.37□□□□□ -1.07
GTF3A-206ENST00000470606 AP1S1P61966 158 aa8.37□□□□□ -1.07
GTF3A-206ENST00000470606 KDSRQ06136 332 aa8.37□□□□□ -1.07
GTF3A-206ENST00000470606 RUNX3Q13761 415 aa8.37□□□□□ -1.07
GTF3A-206ENST00000470606 SEMA3AQ14563 771 aa8.37□□□□□ -1.07
GTF3A-206ENST00000470606 DMC1Q14565 340 aa8.37□□□□□ -1.07
GTF3A-206ENST00000470606 NUMA1Q14980 2115 aa8.37□□□□□ -1.07
GTF3A-206ENST00000470606 TERF2Q15554 542 aa8.37□□□□□ -1.07
GTF3A-206ENST00000470606 ACCSLQ4AC99 568 aa8.37□□□□□ -1.07
GTF3A-206ENST00000470606 FSTL4Q6MZW2 842 aa8.37□□□□□ -1.07
GTF3A-206ENST00000470606 ZNF449Q6P9G9 518 aa8.37□□□□□ -1.07
GTF3A-206ENST00000470606 STRA8Q7Z7C7 330 aa8.37□□□□□ -1.07
GTF3A-206ENST00000470606 TTC30BQ8N4P2 665 aa8.37□□□□□ -1.07
GTF3A-206ENST00000470606 BANPQ8N9N5 519 aa8.37□□□□□ -1.07
GTF3A-206ENST00000470606 EZH1Q92800 747 aaPredicted RBP8.37□□□□□ -1.07
GTF3A-206ENST00000470606 PTPRN2Q92932 1015 aa8.37□□□□□ -1.07
GTF3A-206ENST00000470606 ELSPBP1Q96BH3 223 aa8.37□□□□□ -1.07
GTF3A-206ENST00000470606 ECHDC3Q96DC8 303 aa8.37□□□□□ -1.07
GTF3A-206ENST00000470606 ATXN7L3BQ96GX2 97 aa8.37□□□□□ -1.07
GTF3A-206ENST00000470606 SELENOSQ9BQE4 189 aa8.37□□□□□ -1.07
GTF3A-206ENST00000470606 CIPCQ9C0C6 399 aa8.37□□□□□ -1.07
GTF3A-206ENST00000470606 MTO1Q9Y2Z2 717 aaKnown RBP8.37□□□□□ -1.07
GTF3A-206ENST00000470606 MTF2Q9Y483 593 aaPredicted RBP8.37□□□□□ -1.07
GTF3A-206ENST00000470606 ARIH1Q9Y4X5 557 aaPredicted RBP8.37□□□□□ -1.07
GTF3A-206ENST00000470606 ACTL7BQ9Y614 415 aa8.37□□□□□ -1.07
GTF3A-206ENST00000470606 NUMBLQ9Y6R0 609 aa8.37□□□□□ -1.07
GTF3A-206ENST00000470606 ZNF106Q9H2Y7 1883 aaKnown RBP8.36□□□□□ -1.07
GTF3A-206ENST00000470606 ANKRD12Q6UB98 2062 aa8.36□□□□□ -1.07
GTF3A-206ENST00000470606 ANHXE9PGG2 379 aa8.36□□□□□ -1.07
GTF3A-206ENST00000470606 PAPSS2O95340 614 aaPredicted RBP8.36□□□□□ -1.07
GTF3A-206ENST00000470606 NFATC1O95644 943 aa8.36□□□□□ -1.07
GTF3A-206ENST00000470606 ITGA2BP08514 1039 aa8.36□□□□□ -1.07
GTF3A-206ENST00000470606 SNRPAP09012 282 aaKnown RBP8.36□□□□□ -1.07
GTF3A-206ENST00000470606 DLDP09622 509 aaKnown RBP8.36□□□□□ -1.07
GTF3A-206ENST00000470606 POLR2EP19388 210 aaKnown RBP8.36□□□□□ -1.07
GTF3A-206ENST00000470606 GDI1P31150 447 aa8.36□□□□□ -1.07
GTF3A-206ENST00000470606 GP5P40197 560 aa8.36□□□□□ -1.07
GTF3A-206ENST00000470606 CDKN1CP49918 316 aaPredicted RBP8.36□□□□□ -1.07
GTF3A-206ENST00000470606 SLC18A2Q05940 514 aa8.36□□□□□ -1.07
GTF3A-206ENST00000470606 HTR4Q13639 388 aa8.36□□□□□ -1.07
GTF3A-206ENST00000470606 PDGFRLQ15198 375 aa8.36□□□□□ -1.07
GTF3A-206ENST00000470606 CARD16Q5EG05 197 aa8.36□□□□□ -1.07
GTF3A-206ENST00000470606 PPM1JQ5JR12 505 aa8.36□□□□□ -1.07
GTF3A-206ENST00000470606 RALGPS1Q5JS13 557 aa8.36□□□□□ -1.07
GTF3A-206ENST00000470606 LRRC73Q5JTD7 316 aa8.36□□□□□ -1.07
GTF3A-206ENST00000470606 IER5LQ5T953 404 aa8.36□□□□□ -1.07
GTF3A-206ENST00000470606 PDPK2PQ6A1A2 396 aa8.36□□□□□ -1.07
GTF3A-206ENST00000470606 LYSMD3Q7Z3D4 306 aa8.36□□□□□ -1.07
GTF3A-206ENST00000470606 CMC1Q7Z7K0 106 aa8.36□□□□□ -1.07
GTF3A-206ENST00000470606 ZC3HC1Q86WB0 502 aaKnown RBP8.36□□□□□ -1.07
GTF3A-206ENST00000470606 OR4K2Q8NGD2 314 aa8.36□□□□□ -1.07
GTF3A-206ENST00000470606 ACOX2Q99424 681 aa8.36□□□□□ -1.07
GTF3A-206ENST00000470606 RBBP8Q99708 897 aa8.36□□□□□ -1.07
GTF3A-206ENST00000470606 CEP44Q9C0F1 390 aa8.36□□□□□ -1.07
GTF3A-206ENST00000470606 CAB39LQ9H9S4 337 aa8.36□□□□□ -1.07
GTF3A-206ENST00000470606 ELOVL2Q9NXB9 296 aa8.36□□□□□ -1.07
GTF3A-206ENST00000470606 SLC17A7Q9P2U7 560 aa8.36□□□□□ -1.07
GTF3A-206ENST00000470606 IKBKGQ9Y6K9 419 aa8.36□□□□□ -1.07
GTF3A-206ENST00000470606 WASF2Q9Y6W5 498 aa8.36□□□□□ -1.07
GTF3A-206ENST00000470606 CKAP5Q14008 2032 aa8.36□□□□□ -1.07
GTF3A-206ENST00000470606 PLXNB3Q9ULL4 1909 aa8.36□□□□□ -1.07
GTF3A-206ENST00000470606 CCDC162PA2VCL2 907 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 NPIPB15A6NHN6 443 aaPredicted RBP8.35□□□□□ -1.07
GTF3A-206ENST00000470606 A8MX80 341 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 GAPDHSO14556 408 aaPredicted RBP8.35□□□□□ -1.07
GTF3A-206ENST00000470606 HAUS5O94927 633 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 IGSF6O95976 241 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 GSRP00390 522 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 SLC4A1P02730 911 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 UGT2B4P06133 528 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 CHRM1P11229 460 aaPredicted RBP8.35□□□□□ -1.07
GTF3A-206ENST00000470606 HLA-EP13747 358 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 LIMK2P53671 638 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 SNRPD1P62314 119 aaKnown RBP8.35□□□□□ -1.07
GTF3A-206ENST00000470606 SULT2A1Q06520 285 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 BCL2L1Q07817 233 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 TAF1AQ15573 450 aaPredicted RBP8.35□□□□□ -1.07
GTF3A-206ENST00000470606 ARMC12Q5T9G4 340 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 ZNF470Q6ECI4 717 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 NEPROQ6NW34 567 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 CNSTQ6PJW8 725 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 Q7L0L9 218 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 PTAR1Q7Z6K3 402 aaPredicted RBP8.35□□□□□ -1.07
GTF3A-206ENST00000470606 TSPAN33Q86UF1 283 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 RYBPQ8N488 228 aaPredicted RBP8.35□□□□□ -1.07
GTF3A-206ENST00000470606 DCLK2Q8N568 766 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 PCDH20Q8N6Y1 951 aaKnown RBP8.35□□□□□ -1.07
GTF3A-206ENST00000470606 ANKRD42Q8N9B4 389 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 C2CD4AQ8NCU7 369 aaPredicted RBP8.35□□□□□ -1.07
GTF3A-206ENST00000470606 GRIN3AQ8TCU5 1115 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 MGARPQ8TDB4 240 aa8.35□□□□□ -1.07
GTF3A-206ENST00000470606 CCDC97Q96F63 343 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms