RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 SPATA5L1Q9BVQ7 753 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 SLITRK6Q9H5Y7 841 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 ASAH2Q9NR71 780 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 ANO10Q9NW15 660 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 UXTQ9UBK9 157 aaPredicted RBP6.56□□□□□ -1.36
PTCD3-208ENST00000469585 AFF4Q9UHB7 1163 aaKnown RBP6.56□□□□□ -1.36
PTCD3-208ENST00000469585 PHTF1Q9UMS5 762 aa6.56□□□□□ -1.36
PTCD3-208ENST00000469585 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.56□□□□□ -1.36
PTCD3-208ENST00000469585 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.55□□□□□ -1.36
PTCD3-208ENST00000469585 BECN2A8MW95 431 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 A8MXQ7 604 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 I3L4J1 428 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 M0QZQ0 153 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 PIRO00625 290 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 TGFB1I1O43294 461 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 FAM189A1O60320 539 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 TBC1D4O60343 1298 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 SUN1O94901 812 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 OAZ2O95190 189 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 FAM163BP0C2L3 166 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 LINC00271P0C7V0 271 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 ALADP13716 330 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 PTPN2P17706 415 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 TBXAS1P24557 533 aaPredicted RBP6.55□□□□□ -1.36
PTCD3-208ENST00000469585 GNL1P36915 607 aaPredicted RBP6.55□□□□□ -1.36
PTCD3-208ENST00000469585 MTIF2P46199 727 aaKnown RBP6.55□□□□□ -1.36
PTCD3-208ENST00000469585 PDE6CP51160 858 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 UCP3P55916 312 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 CXADRP78310 365 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 TFF2Q03403 129 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 ZBTB6Q15916 424 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 STX1AQ16623 288 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 MGAT5BQ3V5L5 792 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 SLC39A12Q504Y0 691 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 C3orf38Q5JPI3 329 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 LMBRD2Q68DH5 695 aaPredicted RBP6.55□□□□□ -1.36
PTCD3-208ENST00000469585 FOXR2Q6PJQ5 311 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 MTSS1LQ765P7 747 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 TRAPPC11Q7Z392 1133 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 ADHFE1Q8IWW8 467 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 ADSSL1Q8N142 457 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 FBXL13Q8NEE6 735 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 LNX1Q8TBB1 728 aaPredicted RBP6.55□□□□□ -1.36
PTCD3-208ENST00000469585 PARD3BQ8TEW8 1205 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 TMEM174Q8WUU8 243 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 EXOC4Q96A65 974 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 ZNF503Q96F45 646 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 BOD1Q96IK1 185 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 RPGRIP1Q96KN7 1286 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 B3GALT6Q96L58 329 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 PLEKHG4BQ96PX9 1271 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 TBCBQ99426 244 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 SEPT5Q99719 369 aaPredicted RBP6.55□□□□□ -1.36
PTCD3-208ENST00000469585 PAAF1Q9BRP4 392 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 MED10Q9BTT4 135 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 PHF7Q9BWX1 381 aaPredicted RBP6.55□□□□□ -1.36
PTCD3-208ENST00000469585 TMEM8AQ9HCN3 771 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 SACM1LQ9NTJ5 587 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 GDAP2Q9NXN4 497 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 DDX43Q9NXZ2 648 aaKnown RBP6.55□□□□□ -1.36
PTCD3-208ENST00000469585 CACNG4Q9UBN1 327 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 HESX1Q9UBX0 185 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 RWDD2AQ9UIY3 292 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 FBXL5Q9UKA1 691 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 MAN1B1Q9UKM7 699 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 CDH9Q9ULB4 789 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.55□□□□□ -1.36
PTCD3-208ENST00000469585 ASB3Q9Y575 518 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 ZFP37Q9Y6Q3 630 aaPredicted RBP6.55□□□□□ -1.36
PTCD3-208ENST00000469585 PRRC2BQ5JSZ5 2229 aaKnown RBP6.55□□□□□ -1.36
PTCD3-208ENST00000469585 PLXNA4Q9HCM2 1894 aa6.55□□□□□ -1.36
PTCD3-208ENST00000469585 RANBP2P49792 3224 aaKnown RBP6.54□□□□□ -1.36
PTCD3-208ENST00000469585 A0A1W2PS29 197 aa6.54□□□□□ -1.36
PTCD3-208ENST00000469585 RHPN2P1A8MT19 583 aa6.54□□□□□ -1.36
PTCD3-208ENST00000469585 F8W8V4 182 aa6.54□□□□□ -1.36
PTCD3-208ENST00000469585 LINC01565O15544 149 aa6.54□□□□□ -1.36
PTCD3-208ENST00000469585 MBTPS2O43462 519 aa6.54□□□□□ -1.36
PTCD3-208ENST00000469585 TBX10O75333 385 aa6.54□□□□□ -1.36
PTCD3-208ENST00000469585 VPS4BO75351 444 aa6.54□□□□□ -1.36
PTCD3-208ENST00000469585 PEX11BO96011 259 aa6.54□□□□□ -1.36
PTCD3-208ENST00000469585 EPCAMP16422 314 aa6.54□□□□□ -1.36
PTCD3-208ENST00000469585 PRIM2P49643 509 aa6.54□□□□□ -1.36
PTCD3-208ENST00000469585 MXRA7P84157 204 aa6.54□□□□□ -1.36
PTCD3-208ENST00000469585 DGCR2P98153 550 aa6.54□□□□□ -1.36
PTCD3-208ENST00000469585 ROR1Q01973 937 aa6.54□□□□□ -1.36
PTCD3-208ENST00000469585 GPR17Q13304 367 aa6.54□□□□□ -1.36
PTCD3-208ENST00000469585 CAMK1Q14012 370 aa6.54□□□□□ -1.36
PTCD3-208ENST00000469585 MORC3Q14149 939 aa6.54□□□□□ -1.36
PTCD3-208ENST00000469585 NAB2Q15742 525 aa6.54□□□□□ -1.36
PTCD3-208ENST00000469585 CYP2A13Q16696 494 aa6.54□□□□□ -1.36
PTCD3-208ENST00000469585 CENPPQ6IPU0 288 aa6.54□□□□□ -1.36
PTCD3-208ENST00000469585 SLC8B1Q6J4K2 584 aa6.54□□□□□ -1.36
PTCD3-208ENST00000469585 CRELD2Q6UXH1 353 aaPredicted RBP6.54□□□□□ -1.36
PTCD3-208ENST00000469585 EFCAB13Q8IY85 973 aa6.54□□□□□ -1.36
PTCD3-208ENST00000469585 CMASQ8NFW8 434 aaPredicted RBP6.54□□□□□ -1.36
PTCD3-208ENST00000469585 SPATA20Q8TB22 786 aa6.54□□□□□ -1.36
PTCD3-208ENST00000469585 SLC25A43Q8WUT9 341 aaPredicted RBP6.54□□□□□ -1.36
PTCD3-208ENST00000469585 NACC2Q96BF6 587 aa6.54□□□□□ -1.36
PTCD3-208ENST00000469585 MYEOVQ96EZ4 313 aa6.54□□□□□ -1.36
PTCD3-208ENST00000469585 ACBD6Q9BR61 282 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms