RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 PARP15Q460N3 678 aa12.34□□□□□ -0.43
HDAC3-204ENST00000469207 PPP1R15BQ5SWA1 713 aa12.34□□□□□ -0.43
HDAC3-204ENST00000469207 DNAJC24Q6P3W2 148 aa12.34□□□□□ -0.43
HDAC3-204ENST00000469207 LVRNQ6Q4G3 990 aa12.34□□□□□ -0.43
HDAC3-204ENST00000469207 TAF8Q7Z7C8 310 aa12.34□□□□□ -0.43
HDAC3-204ENST00000469207 SRLQ86TD4 932 aa12.34□□□□□ -0.43
HDAC3-204ENST00000469207 FAM46DQ8NEK8 389 aa12.34□□□□□ -0.43
HDAC3-204ENST00000469207 GPR156Q8NFN8 814 aa12.34□□□□□ -0.43
HDAC3-204ENST00000469207 WDR48Q8TAF3 677 aa12.34□□□□□ -0.43
HDAC3-204ENST00000469207 COL26A1Q96A83 441 aa12.34□□□□□ -0.43
HDAC3-204ENST00000469207 LIN37Q96GY3 246 aaPredicted RBP12.34□□□□□ -0.43
HDAC3-204ENST00000469207 WDR92Q96MX6 357 aa12.34□□□□□ -0.43
HDAC3-204ENST00000469207 RBM15Q96T37 977 aaKnown RBP eCLIP12.34□□□□□ -0.43
HDAC3-204ENST00000469207 SUDS3Q9H7L9 328 aaPredicted RBP12.34□□□□□ -0.43
HDAC3-204ENST00000469207 CATSPERBQ9H7T0 1116 aa12.34□□□□□ -0.43
HDAC3-204ENST00000469207 FGF22Q9HCT0 170 aa12.34□□□□□ -0.43
HDAC3-204ENST00000469207 PCSK1NQ9UHG2 260 aa12.34□□□□□ -0.43
HDAC3-204ENST00000469207 MOSPD1Q9UJG1 213 aa12.34□□□□□ -0.43
HDAC3-204ENST00000469207 RNF215Q9Y6U7 377 aa12.34□□□□□ -0.43
HDAC3-204ENST00000469207 UNC13CQ8NB66 2214 aa12.34□□□□□ -0.43
HDAC3-204ENST00000469207 PIEZO2Q9H5I5 2752 aa12.34□□□□□ -0.43
HDAC3-204ENST00000469207 ANKRD36A6QL64 1941 aa12.33□□□□□ -0.44
HDAC3-204ENST00000469207 TMCO5BA8MYB1 307 aa12.33□□□□□ -0.44
HDAC3-204ENST00000469207 TEX33O43247 280 aa12.33□□□□□ -0.44
HDAC3-204ENST00000469207 PRAMEF11O60813 436 aa12.33□□□□□ -0.44
HDAC3-204ENST00000469207 PALMO75781 387 aa12.33□□□□□ -0.44
HDAC3-204ENST00000469207 FUCA1P04066 466 aa12.33□□□□□ -0.44
HDAC3-204ENST00000469207 MMP12P39900 470 aa12.33□□□□□ -0.44
HDAC3-204ENST00000469207 TPI1P60174 286 aa12.33□□□□□ -0.44
HDAC3-204ENST00000469207 CYP4F2P78329 520 aa12.33□□□□□ -0.44
HDAC3-204ENST00000469207 FKBP15Q5T1M5 1219 aa12.33□□□□□ -0.44
HDAC3-204ENST00000469207 ERAP2Q6P179 960 aa12.33□□□□□ -0.44
HDAC3-204ENST00000469207 OGFOD3Q6PK18 319 aa12.33□□□□□ -0.44
HDAC3-204ENST00000469207 LIPIQ6XZB0 460 aa12.33□□□□□ -0.44
HDAC3-204ENST00000469207 VASH2Q86V25 355 aa12.33□□□□□ -0.44
HDAC3-204ENST00000469207 ZFAND4Q86XD8 727 aa12.33□□□□□ -0.44
HDAC3-204ENST00000469207 MCOLN2Q8IZK6 566 aa12.33□□□□□ -0.44
HDAC3-204ENST00000469207 HCAR2Q8TDS4 363 aa12.33□□□□□ -0.44
HDAC3-204ENST00000469207 PTCD2Q8WV60 388 aaKnown RBP12.33□□□□□ -0.44
HDAC3-204ENST00000469207 EXTL1Q92935 676 aa12.33□□□□□ -0.44
HDAC3-204ENST00000469207 PEBP4Q96S96 227 aa12.33□□□□□ -0.44
HDAC3-204ENST00000469207 CNPY3Q9BT09 278 aa12.33□□□□□ -0.44
HDAC3-204ENST00000469207 SEMA6CQ9H3T2 930 aa12.33□□□□□ -0.44
HDAC3-204ENST00000469207 DHX35Q9H5Z1 703 aaKnown RBP12.33□□□□□ -0.44
HDAC3-204ENST00000469207 CHMP5Q9NZZ3 219 aa12.33□□□□□ -0.44
HDAC3-204ENST00000469207 LRIT1Q9P2V4 623 aa12.33□□□□□ -0.44
HDAC3-204ENST00000469207 ATP8A1Q9Y2Q0 1164 aa12.33□□□□□ -0.44
HDAC3-204ENST00000469207 LOXL2Q9Y4K0 774 aa12.33□□□□□ -0.44
HDAC3-204ENST00000469207 LRP4O75096 1905 aa12.33□□□□□ -0.44
HDAC3-204ENST00000469207 COL6A6A6NMZ7 2263 aa12.32□□□□□ -0.44
HDAC3-204ENST00000469207 PRAMEF33A0A0G2JMD5 474 aa12.32□□□□□ -0.44
HDAC3-204ENST00000469207 A0A0U1RQS6 177 aa12.32□□□□□ -0.44
HDAC3-204ENST00000469207 CAPN8A6NHC0 703 aa12.32□□□□□ -0.44
HDAC3-204ENST00000469207 B4DGG1 531 aa12.32□□□□□ -0.44
HDAC3-204ENST00000469207 ATMINO43313 823 aaPredicted RBP12.32□□□□□ -0.44
HDAC3-204ENST00000469207 B4GAT1O43505 415 aa12.32□□□□□ -0.44
HDAC3-204ENST00000469207 SLC28A2O43868 658 aa12.32□□□□□ -0.44
HDAC3-204ENST00000469207 PRAMEF10O60809 474 aa12.32□□□□□ -0.44
HDAC3-204ENST00000469207 JMJD7P0C870 316 aa12.32□□□□□ -0.44
HDAC3-204ENST00000469207 WT1P19544 449 aaPredicted RBP12.32□□□□□ -0.44
HDAC3-204ENST00000469207 SCNN1BP51168 640 aa12.32□□□□□ -0.44
HDAC3-204ENST00000469207 SUOXP51687 545 aa12.32□□□□□ -0.44
HDAC3-204ENST00000469207 NDST2P52849 883 aa12.32□□□□□ -0.44
HDAC3-204ENST00000469207 MAPK10P53779 464 aa12.32□□□□□ -0.44
HDAC3-204ENST00000469207 UBXN1Q04323 297 aa12.32□□□□□ -0.44
HDAC3-204ENST00000469207 ZFP36L1Q07352 338 aaKnown RBP12.32□□□□□ -0.44
HDAC3-204ENST00000469207 AGERQ15109 404 aa12.32□□□□□ -0.44
HDAC3-204ENST00000469207 CFAP58Q5T655 872 aa12.32□□□□□ -0.44
HDAC3-204ENST00000469207 ACAD10Q6JQN1 1059 aa12.32□□□□□ -0.44
HDAC3-204ENST00000469207 DCUN1D2Q6PH85 259 aa12.32□□□□□ -0.44
HDAC3-204ENST00000469207 CCNJLQ8IV13 435 aa12.32□□□□□ -0.44
HDAC3-204ENST00000469207 ARHGAP12Q8IWW6 846 aa12.32□□□□□ -0.44
HDAC3-204ENST00000469207 NEK11Q8NG66 645 aa12.32□□□□□ -0.44
HDAC3-204ENST00000469207 OR56A4Q8NGH8 313 aa12.32□□□□□ -0.44
HDAC3-204ENST00000469207 JPH3Q8WXH2 748 aaPredicted RBP12.32□□□□□ -0.44
HDAC3-204ENST00000469207 USP7Q93009 1102 aa12.32□□□□□ -0.44
HDAC3-204ENST00000469207 ZNF641Q96N77 438 aaPredicted RBP12.32□□□□□ -0.44
HDAC3-204ENST00000469207 KCTD15Q96SI1 283 aaPredicted RBP12.32□□□□□ -0.44
HDAC3-204ENST00000469207 TRIM7Q9C029 511 aa12.32□□□□□ -0.44
HDAC3-204ENST00000469207 TRIM4Q9C037 500 aa12.32□□□□□ -0.44
HDAC3-204ENST00000469207 STRADBQ9C0K7 418 aa12.32□□□□□ -0.44
HDAC3-204ENST00000469207 DPEP2Q9H4A9 486 aa12.32□□□□□ -0.44
HDAC3-204ENST00000469207 RDH14Q9HBH5 336 aa12.32□□□□□ -0.44
HDAC3-204ENST00000469207 CYP4F12Q9HCS2 524 aa12.32□□□□□ -0.44
HDAC3-204ENST00000469207 SPATS2LQ9NUQ6 558 aaKnown RBP12.32□□□□□ -0.44
HDAC3-204ENST00000469207 FOXJ2Q9P0K8 574 aa12.32□□□□□ -0.44
HDAC3-204ENST00000469207 AP4E1Q9UPM8 1137 aa12.32□□□□□ -0.44
HDAC3-204ENST00000469207 PCDHGA7Q9Y5G6 932 aa12.32□□□□□ -0.44
HDAC3-204ENST00000469207 DGKBQ9Y6T7 804 aa12.32□□□□□ -0.44
HDAC3-204ENST00000469207 BSNQ9UPA5 3926 aa12.31□□□□□ -0.44
HDAC3-204ENST00000469207 DFFAO00273 331 aa12.31□□□□□ -0.44
HDAC3-204ENST00000469207 EEF2KO00418 725 aaKnown RBP12.31□□□□□ -0.44
HDAC3-204ENST00000469207 TRAFD1O14545 582 aaPredicted RBP12.31□□□□□ -0.44
HDAC3-204ENST00000469207 GLB1P16278 677 aa12.31□□□□□ -0.44
HDAC3-204ENST00000469207 ERCC2P18074 760 aa12.31□□□□□ -0.44
HDAC3-204ENST00000469207 CCKBRP32239 447 aa12.31□□□□□ -0.44
HDAC3-204ENST00000469207 MAZP56270 477 aaKnown RBP12.31□□□□□ -0.44
HDAC3-204ENST00000469207 OR1D5P58170 312 aa12.31□□□□□ -0.44
HDAC3-204ENST00000469207 B4GALNT1Q00973 533 aa12.31□□□□□ -0.44
HDAC3-204ENST00000469207 NFATC3Q12968 1075 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms