RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 BRF2Q9HAW0 419 aa5.47□□□□□ -1.53
XRN1-207ENST00000468894 CDC14AQ9UNH5 594 aa5.47□□□□□ -1.53
XRN1-207ENST00000468894 KDM3AQ9Y4C1 1321 aa5.47□□□□□ -1.53
XRN1-207ENST00000468894 SNAP23O00161 211 aa5.46□□□□□ -1.54
XRN1-207ENST00000468894 ZIC3O60481 467 aa5.46□□□□□ -1.54
XRN1-207ENST00000468894 MTA2O94776 668 aa5.46□□□□□ -1.54
XRN1-207ENST00000468894 SEC31AO94979 1220 aaKnown RBP5.46□□□□□ -1.54
XRN1-207ENST00000468894 IGHV4-30-4P0DP06 118 aa5.46□□□□□ -1.54
XRN1-207ENST00000468894 IRF1P10914 325 aa5.46□□□□□ -1.54
XRN1-207ENST00000468894 GPTP24298 496 aa5.46□□□□□ -1.54
XRN1-207ENST00000468894 HNRNPH1P31943 449 aaKnown RBP5.46□□□□□ -1.54
XRN1-207ENST00000468894 ARL1P40616 181 aaPredicted RBP5.46□□□□□ -1.54
XRN1-207ENST00000468894 HARS2P49590 506 aaKnown RBP5.46□□□□□ -1.54
XRN1-207ENST00000468894 TUBA1BP68363 451 aa5.46□□□□□ -1.54
XRN1-207ENST00000468894 DDR1Q08345 913 aa5.46□□□□□ -1.54
XRN1-207ENST00000468894 MYBPHQ13203 477 aa5.46□□□□□ -1.54
XRN1-207ENST00000468894 KLHL22Q53GT1 634 aa5.46□□□□□ -1.54
XRN1-207ENST00000468894 XKR9Q5GH70 373 aa5.46□□□□□ -1.54
XRN1-207ENST00000468894 CPLX2Q6PUV4 134 aaKnown RBP5.46□□□□□ -1.54
XRN1-207ENST00000468894 PRSS57Q6UWY2 283 aa5.46□□□□□ -1.54
XRN1-207ENST00000468894 NEK10Q6ZWH5 1172 aa5.46□□□□□ -1.54
XRN1-207ENST00000468894 C16orf82Q7Z2V1 217 aa5.46□□□□□ -1.54
XRN1-207ENST00000468894 ZC3HC1Q86WB0 502 aaKnown RBP5.46□□□□□ -1.54
XRN1-207ENST00000468894 ARMC8Q8IUR7 673 aa5.46□□□□□ -1.54
XRN1-207ENST00000468894 PGBD5Q8N414 524 aa5.46□□□□□ -1.54
XRN1-207ENST00000468894 SCCPDHQ8NBX0 429 aa5.46□□□□□ -1.54
XRN1-207ENST00000468894 ZNF114Q8NC26 417 aa5.46□□□□□ -1.54
XRN1-207ENST00000468894 BEST2Q8NFU1 509 aa5.46□□□□□ -1.54
XRN1-207ENST00000468894 CADM4Q8NFZ8 388 aa5.46□□□□□ -1.54
XRN1-207ENST00000468894 FAM84BQ96KN1 310 aaPredicted RBP5.46□□□□□ -1.54
XRN1-207ENST00000468894 SEC62Q99442 399 aaKnown RBP5.46□□□□□ -1.54
XRN1-207ENST00000468894 H2AFJQ9BTM1 129 aa5.46□□□□□ -1.54
XRN1-207ENST00000468894 PREBQ9HCU5 417 aa5.46□□□□□ -1.54
XRN1-207ENST00000468894 BPIFA1Q9NP55 256 aa5.46□□□□□ -1.54
XRN1-207ENST00000468894 NOX4Q9NPH5 578 aa5.46□□□□□ -1.54
XRN1-207ENST00000468894 MKKSQ9NPJ1 570 aaPredicted RBP5.46□□□□□ -1.54
XRN1-207ENST00000468894 SLC9A2Q9UBY0 812 aa5.46□□□□□ -1.54
XRN1-207ENST00000468894 hDV102S1A0JD36 115 aa5.45□□□□□ -1.54
XRN1-207ENST00000468894 NDUFS7O75251 213 aa5.45□□□□□ -1.54
XRN1-207ENST00000468894 TGFB3P10600 412 aa5.45□□□□□ -1.54
XRN1-207ENST00000468894 CD58P19256 250 aa5.45□□□□□ -1.54
XRN1-207ENST00000468894 GABRB2P47870 512 aa5.45□□□□□ -1.54
XRN1-207ENST00000468894 NEXNQ0ZGT2 675 aa5.45□□□□□ -1.54
XRN1-207ENST00000468894 IZUMO4Q1ZYL8 232 aa5.45□□□□□ -1.54
XRN1-207ENST00000468894 ALG11Q2TAA5 492 aa5.45□□□□□ -1.54
XRN1-207ENST00000468894 PPP6R3Q5H9R7 873 aaPredicted RBP5.45□□□□□ -1.54
XRN1-207ENST00000468894 CAPRIN2Q6IMN6 1127 aaKnown RBP5.45□□□□□ -1.54
XRN1-207ENST00000468894 B3GNT6Q6ZMB0 384 aa5.45□□□□□ -1.54
XRN1-207ENST00000468894 QSOX2Q6ZRP7 698 aa5.45□□□□□ -1.54
XRN1-207ENST00000468894 LINGO2Q7L985 606 aa5.45□□□□□ -1.54
XRN1-207ENST00000468894 ZCCHC9Q8N567 271 aaKnown RBP5.45□□□□□ -1.54
XRN1-207ENST00000468894 ZBTB2Q8N680 514 aa5.45□□□□□ -1.54
XRN1-207ENST00000468894 NAXEQ8NCW5 288 aa5.45□□□□□ -1.54
XRN1-207ENST00000468894 AGBL3Q8NEM8 1001 aa5.45□□□□□ -1.54
XRN1-207ENST00000468894 LMO3Q8TAP4 145 aa5.45□□□□□ -1.54
XRN1-207ENST00000468894 RTP4Q96DX8 246 aa5.45□□□□□ -1.54
XRN1-207ENST00000468894 PPM1MQ96MI6 270 aa5.45□□□□□ -1.54
XRN1-207ENST00000468894 HAUS8Q9BT25 410 aa5.45□□□□□ -1.54
XRN1-207ENST00000468894 MMTAG2Q9BU76 263 aaKnown RBP5.45□□□□□ -1.54
XRN1-207ENST00000468894 GAREM1Q9H706 876 aa5.45□□□□□ -1.54
XRN1-207ENST00000468894 WDR26Q9H7D7 661 aa5.45□□□□□ -1.54
XRN1-207ENST00000468894 TMEM98Q9Y2Y6 226 aa5.45□□□□□ -1.54
XRN1-207ENST00000468894 PCDHGB1Q9Y5G3 927 aa5.45□□□□□ -1.54
XRN1-207ENST00000468894 STON1Q9Y6Q2 735 aa5.45□□□□□ -1.54
XRN1-207ENST00000468894 IGLV5-37A0A075B6J1 123 aa5.44□□□□□ -1.54
XRN1-207ENST00000468894 TMEM202A6NGA9 273 aa5.44□□□□□ -1.54
XRN1-207ENST00000468894 ACOT8O14734 319 aa5.44□□□□□ -1.54
XRN1-207ENST00000468894 CYC1P08574 325 aa5.44□□□□□ -1.54
XRN1-207ENST00000468894 CPOXP36551 454 aa5.44□□□□□ -1.54
XRN1-207ENST00000468894 EIF2S3P41091 472 aaKnown RBP5.44□□□□□ -1.54
XRN1-207ENST00000468894 GNAQP50148 359 aa5.44□□□□□ -1.54
XRN1-207ENST00000468894 PAPPA-AS1Q5QFB9 102 aa5.44□□□□□ -1.54
XRN1-207ENST00000468894 RBMXL3Q8N7X1 1067 aaKnown RBP5.44□□□□□ -1.54
XRN1-207ENST00000468894 LILRB1Q8NHL6 650 aaPredicted RBP5.44□□□□□ -1.54
XRN1-207ENST00000468894 HUS1BQ8NHY5 278 aa5.44□□□□□ -1.54
XRN1-207ENST00000468894 SCMH1Q96GD3 660 aa5.44□□□□□ -1.54
XRN1-207ENST00000468894 ZNF570Q96NI8 536 aa5.44□□□□□ -1.54
XRN1-207ENST00000468894 SPRY4Q9C004 299 aa5.44□□□□□ -1.54
XRN1-207ENST00000468894 JMJD4Q9H9V9 463 aa5.44□□□□□ -1.54
XRN1-207ENST00000468894 PCDHB16Q9NRJ7 776 aa5.44□□□□□ -1.54
XRN1-207ENST00000468894 SLCO3A1Q9UIG8 710 aa5.44□□□□□ -1.54
XRN1-207ENST00000468894 PROCRQ9UNN8 238 aa5.44□□□□□ -1.54
XRN1-207ENST00000468894 SEC14L5O43304 696 aa5.43□□□□□ -1.54
XRN1-207ENST00000468894 AFPP02771 609 aaKnown RBP5.43□□□□□ -1.54
XRN1-207ENST00000468894 HOXB5P09067 269 aa5.43□□□□□ -1.54
XRN1-207ENST00000468894 ICAM3P32942 547 aa5.43□□□□□ -1.54
XRN1-207ENST00000468894 CTCFP49711 727 aaPredicted RBP5.43□□□□□ -1.54
XRN1-207ENST00000468894 CASP6P55212 293 aa5.43□□□□□ -1.54
XRN1-207ENST00000468894 BRWD1-AS2P59051 145 aa5.43□□□□□ -1.54
XRN1-207ENST00000468894 NEDD9Q14511 834 aa5.43□□□□□ -1.54
XRN1-207ENST00000468894 C2orf68Q2NKX9 166 aa5.43□□□□□ -1.54
XRN1-207ENST00000468894 EIF2S3LQ2VIR3 472 aaKnown RBP5.43□□□□□ -1.54
XRN1-207ENST00000468894 AMZ1Q400G9 498 aa5.43□□□□□ -1.54
XRN1-207ENST00000468894 JAKMIP3Q5VZ66 844 aa5.43□□□□□ -1.54
XRN1-207ENST00000468894 RHBDF2Q6PJF5 856 aa5.43□□□□□ -1.54
XRN1-207ENST00000468894 FOXRED2Q8IWF2 684 aa5.43□□□□□ -1.54
XRN1-207ENST00000468894 PCYOX1LQ8NBM8 494 aa5.43□□□□□ -1.54
XRN1-207ENST00000468894 SAAL1Q96ER3 474 aa5.43□□□□□ -1.54
XRN1-207ENST00000468894 ADGRG7Q96K78 797 aa5.43□□□□□ -1.54
XRN1-207ENST00000468894 SLITRK1Q96PX8 696 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms