RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 C6P13671 934 aa17.78■□□□□ 0.44
VPS52-214ENST00000463486 AKT2P31751 481 aa17.78■□□□□ 0.44
VPS52-214ENST00000463486 OTUD4Q01804 1114 aaKnown RBP17.78■□□□□ 0.44
VPS52-214ENST00000463486 OVGP1Q12889 678 aa17.78■□□□□ 0.44
VPS52-214ENST00000463486 STAT4Q14765 748 aa17.78■□□□□ 0.44
VPS52-214ENST00000463486 PRAMEF14Q5SWL7 426 aa17.78■□□□□ 0.44
VPS52-214ENST00000463486 CFAP58Q5T655 872 aa17.78■□□□□ 0.44
VPS52-214ENST00000463486 ERAP2Q6P179 960 aa17.78■□□□□ 0.44
VPS52-214ENST00000463486 IL27RAQ6UWB1 636 aa17.78■□□□□ 0.44
VPS52-214ENST00000463486 LIPIQ6XZB0 460 aa17.78■□□□□ 0.44
VPS52-214ENST00000463486 SLC22A18ASQ8N1D0 253 aa17.78■□□□□ 0.44
VPS52-214ENST00000463486 UBL4BQ8N7F7 174 aa17.78■□□□□ 0.44
VPS52-214ENST00000463486 TP53I13Q8NBR0 393 aaPredicted RBP17.78■□□□□ 0.44
VPS52-214ENST00000463486 OR13H1Q8NG92 308 aa17.78■□□□□ 0.44
VPS52-214ENST00000463486 SCRN2Q96FV2 425 aa17.78■□□□□ 0.44
VPS52-214ENST00000463486 AGAP3Q96P47 875 aa17.78■□□□□ 0.44
VPS52-214ENST00000463486 SLC25A51Q9H1U9 297 aa17.78■□□□□ 0.44
VPS52-214ENST00000463486 MBNL1Q9NR56 388 aaKnown RBP17.78■□□□□ 0.44
VPS52-214ENST00000463486 B4GALT6Q9UBX8 382 aa17.78■□□□□ 0.44
VPS52-214ENST00000463486 TMEM131Q92545 1883 aa17.78■□□□□ 0.44
VPS52-214ENST00000463486 HACD1B0YJ81 288 aa17.77■□□□□ 0.44
VPS52-214ENST00000463486 TM7SF2O76062 418 aa17.77■□□□□ 0.44
VPS52-214ENST00000463486 CPP00450 1065 aa17.77■□□□□ 0.44
VPS52-214ENST00000463486 LHCGRP22888 699 aa17.77■□□□□ 0.44
VPS52-214ENST00000463486 XPAP23025 273 aaPredicted RBP17.77■□□□□ 0.44
VPS52-214ENST00000463486 CD86P42081 329 aa17.77■□□□□ 0.44
VPS52-214ENST00000463486 ATXN3P54252 364 aaPredicted RBP17.77■□□□□ 0.44
VPS52-214ENST00000463486 FAM193AP78312 1265 aa17.77■□□□□ 0.44
VPS52-214ENST00000463486 SGCGQ13326 291 aa17.77■□□□□ 0.44
VPS52-214ENST00000463486 SLC14A1Q13336 389 aa17.77■□□□□ 0.44
VPS52-214ENST00000463486 WSCD2Q2TBF2 565 aa17.77■□□□□ 0.44
VPS52-214ENST00000463486 SLC45A4Q5BKX6 768 aa17.77■□□□□ 0.44
VPS52-214ENST00000463486 TPRG1LQ5T0D9 272 aa17.77■□□□□ 0.44
VPS52-214ENST00000463486 ARMC12Q5T9G4 340 aa17.77■□□□□ 0.44
VPS52-214ENST00000463486 REXO1L1PQ8IX06 675 aa17.77■□□□□ 0.44
VPS52-214ENST00000463486 DENND6BQ8NEG7 585 aa17.77■□□□□ 0.44
VPS52-214ENST00000463486 CXorf40AQ8TE69 158 aa17.77■□□□□ 0.44
VPS52-214ENST00000463486 PDCD6IPQ8WUM4 868 aaKnown RBP17.77■□□□□ 0.44
VPS52-214ENST00000463486 HTR3CQ8WXA8 447 aa17.77■□□□□ 0.44
VPS52-214ENST00000463486 TRIB3Q96RU7 358 aa17.77■□□□□ 0.44
VPS52-214ENST00000463486 FAM118BQ9BPY3 351 aa17.77■□□□□ 0.44
VPS52-214ENST00000463486 TLR10Q9BXR5 811 aa17.77■□□□□ 0.44
VPS52-214ENST00000463486 CAAP1Q9H8G2 361 aa17.77■□□□□ 0.44
VPS52-214ENST00000463486 ERVMER34-1Q9H9K5 563 aa17.77■□□□□ 0.44
VPS52-214ENST00000463486 GLOD4Q9HC38 313 aa17.77■□□□□ 0.44
VPS52-214ENST00000463486 SEPT10Q9P0V9 454 aa17.77■□□□□ 0.44
VPS52-214ENST00000463486 CHKBQ9Y259 395 aa17.77■□□□□ 0.44
VPS52-214ENST00000463486 COQ6Q9Y2Z9 468 aa17.77■□□□□ 0.44
VPS52-214ENST00000463486 TTLL3Q9Y4R7 772 aa17.77■□□□□ 0.44
VPS52-214ENST00000463486 PCNX2A6NKB5 2137 aa17.77■□□□□ 0.43
VPS52-214ENST00000463486 A0A1B0GTQ1 180 aa17.76■□□□□ 0.43
VPS52-214ENST00000463486 NPIPB15A6NHN6 443 aaPredicted RBP17.76■□□□□ 0.43
VPS52-214ENST00000463486 OPHN1O60890 802 aa17.76■□□□□ 0.43
VPS52-214ENST00000463486 TJP3O95049 919 aa17.76■□□□□ 0.43
VPS52-214ENST00000463486 CER1O95813 267 aa17.76■□□□□ 0.43
VPS52-214ENST00000463486 THEGLP0DJG4 465 aa17.76■□□□□ 0.43
VPS52-214ENST00000463486 RBL1P28749 1068 aa17.76■□□□□ 0.43
VPS52-214ENST00000463486 IGFALSP35858 605 aa17.76■□□□□ 0.43
VPS52-214ENST00000463486 C21orf59P57076 290 aa17.76■□□□□ 0.43
VPS52-214ENST00000463486 PFN3P60673 137 aa17.76■□□□□ 0.43
VPS52-214ENST00000463486 GSE1Q14687 1217 aa17.76■□□□□ 0.43
VPS52-214ENST00000463486 UAP1L1Q3KQV9 507 aa17.76■□□□□ 0.43
VPS52-214ENST00000463486 KYAT3Q6YP21 454 aaKnown RBP17.76■□□□□ 0.43
VPS52-214ENST00000463486 Q6ZSR6 202 aa17.76■□□□□ 0.43
VPS52-214ENST00000463486 ADAT2Q7Z6V5 191 aaKnown RBP17.76■□□□□ 0.43
VPS52-214ENST00000463486 ZNF567Q8N184 647 aa17.76■□□□□ 0.43
VPS52-214ENST00000463486 SPATA22Q8NHS9 363 aa17.76■□□□□ 0.43
VPS52-214ENST00000463486 KLHDC7BQ96G42 594 aa17.76■□□□□ 0.43
VPS52-214ENST00000463486 COQ10AQ96MF6 247 aa17.76■□□□□ 0.43
VPS52-214ENST00000463486 ELF4Q99607 663 aaPredicted RBP17.76■□□□□ 0.43
VPS52-214ENST00000463486 USP29Q9HBJ7 922 aa17.76■□□□□ 0.43
VPS52-214ENST00000463486 R3HDM2Q9Y2K5 976 aaKnown RBP17.76■□□□□ 0.43
VPS52-214ENST00000463486 A0A0J9YYE9 177 aa17.75■□□□□ 0.43
VPS52-214ENST00000463486 A0A0U1RQS6 177 aa17.75■□□□□ 0.43
VPS52-214ENST00000463486 A8MX80 341 aa17.75■□□□□ 0.43
VPS52-214ENST00000463486 MTSS1O43312 755 aa17.75■□□□□ 0.43
VPS52-214ENST00000463486 HEXIM1O94992 359 aaKnown RBP17.75■□□□□ 0.43
VPS52-214ENST00000463486 TRBC1P01850 177 aa17.75■□□□□ 0.43
VPS52-214ENST00000463486 ALPIP09923 528 aa17.75■□□□□ 0.43
VPS52-214ENST00000463486 VIPR1P32241 457 aa17.75■□□□□ 0.43
VPS52-214ENST00000463486 HNF1BP35680 557 aa17.75■□□□□ 0.43
VPS52-214ENST00000463486 RXRGP48443 463 aa17.75■□□□□ 0.43
VPS52-214ENST00000463486 RPL26P61254 145 aaKnown RBP17.75■□□□□ 0.43
VPS52-214ENST00000463486 SLC14A2Q15849 920 aa17.75■□□□□ 0.43
VPS52-214ENST00000463486 CNGA3Q16281 694 aa17.75■□□□□ 0.43
VPS52-214ENST00000463486 CDKN3Q16667 212 aa17.75■□□□□ 0.43
VPS52-214ENST00000463486 KANSL1Q7Z3B3 1105 aa17.75■□□□□ 0.43
VPS52-214ENST00000463486 TSPAN33Q86UF1 283 aa17.75■□□□□ 0.43
VPS52-214ENST00000463486 FAM174AQ8TBP5 190 aa17.75■□□□□ 0.43
VPS52-214ENST00000463486 SKA1Q96BD8 255 aa17.75■□□□□ 0.43
VPS52-214ENST00000463486 LYSMD1Q96S90 227 aa17.75■□□□□ 0.43
VPS52-214ENST00000463486 RBM15Q96T37 977 aaKnown RBP eCLIP17.75■□□□□ 0.43
VPS52-214ENST00000463486 GORASP1Q9BQQ3 440 aa17.75■□□□□ 0.43
VPS52-214ENST00000463486 PCDH9Q9HC56 1237 aa17.75■□□□□ 0.43
VPS52-214ENST00000463486 GDF3Q9NR23 364 aa17.75■□□□□ 0.43
VPS52-214ENST00000463486 TM7SF3Q9NS93 570 aa17.75■□□□□ 0.43
VPS52-214ENST00000463486 RPL26L1Q9UNX3 145 aaKnown RBP17.75■□□□□ 0.43
VPS52-214ENST00000463486 PCDHGB2Q9Y5G2 931 aa17.75■□□□□ 0.43
VPS52-214ENST00000463486 TP53BP1Q12888 1972 aaPredicted RBP17.75■□□□□ 0.43
VPS52-214ENST00000463486 NRDCO43847 1150 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms