RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 TMEM135Q86UB9 458 aa14.41□□□□□ -0.1
COL6A1-202ENST00000463060 TMPRSS6Q8IU80 811 aa14.41□□□□□ -0.1
COL6A1-202ENST00000463060 AADATQ8N5Z0 425 aa14.41□□□□□ -0.1
COL6A1-202ENST00000463060 MDGA1Q8NFP4 955 aa14.41□□□□□ -0.1
COL6A1-202ENST00000463060 BRSK1Q8TDC3 778 aa14.41□□□□□ -0.1
COL6A1-202ENST00000463060 EID2BQ96D98 161 aa14.41□□□□□ -0.1
COL6A1-202ENST00000463060 MRGPRX1Q96LB2 322 aa14.41□□□□□ -0.1
COL6A1-202ENST00000463060 EPB41L4BQ9H329 900 aa14.41□□□□□ -0.1
COL6A1-202ENST00000463060 SEMA4AQ9H3S1 761 aa14.41□□□□□ -0.1
COL6A1-202ENST00000463060 RIMKLBQ9ULI2 386 aa14.41□□□□□ -0.1
COL6A1-202ENST00000463060 SOX13Q9UN79 622 aa14.41□□□□□ -0.1
COL6A1-202ENST00000463060 SIT1Q9Y3P8 196 aa14.41□□□□□ -0.1
COL6A1-202ENST00000463060 TECTAO75443 2155 aa14.41□□□□□ -0.1
COL6A1-202ENST00000463060 CAPN8A6NHC0 703 aa14.4□□□□□ -0.1
COL6A1-202ENST00000463060 UPK3BL1B0FP48 263 aa14.4□□□□□ -0.1
COL6A1-202ENST00000463060 UPK3BL2E5RIL1 263 aa14.4□□□□□ -0.1
COL6A1-202ENST00000463060 C1QTNF3-AMACRE9PGA6 284 aa14.4□□□□□ -0.1
COL6A1-202ENST00000463060 MID1O15344 667 aa14.4□□□□□ -0.1
COL6A1-202ENST00000463060 RNASEH1O60930 286 aaKnown RBP14.4□□□□□ -0.1
COL6A1-202ENST00000463060 ATG13O75143 517 aa14.4□□□□□ -0.1
COL6A1-202ENST00000463060 PDGFBP01127 241 aaPredicted RBP14.4□□□□□ -0.1
COL6A1-202ENST00000463060 ALPIP09923 528 aa14.4□□□□□ -0.1
COL6A1-202ENST00000463060 PIRTP0C851 137 aa14.4□□□□□ -0.1
COL6A1-202ENST00000463060 CTPS1P17812 591 aa14.4□□□□□ -0.1
COL6A1-202ENST00000463060 GABRG2P18507 467 aa14.4□□□□□ -0.1
COL6A1-202ENST00000463060 C5AR1P21730 350 aa14.4□□□□□ -0.1
COL6A1-202ENST00000463060 P2RY2P41231 377 aa14.4□□□□□ -0.1
COL6A1-202ENST00000463060 PSMD8P48556 350 aa14.4□□□□□ -0.1
COL6A1-202ENST00000463060 SUOXP51687 545 aa14.4□□□□□ -0.1
COL6A1-202ENST00000463060 ZBTB16Q05516 673 aa14.4□□□□□ -0.1
COL6A1-202ENST00000463060 POU6F1Q14863 301 aa14.4□□□□□ -0.1
COL6A1-202ENST00000463060 SLMAPQ14BN4 828 aa14.4□□□□□ -0.1
COL6A1-202ENST00000463060 CCDC38Q502W7 563 aa14.4□□□□□ -0.1
COL6A1-202ENST00000463060 HP1BP3Q5SSJ5 553 aaPredicted RBP14.4□□□□□ -0.1
COL6A1-202ENST00000463060 BEND6Q5SZJ8 279 aaPredicted RBP14.4□□□□□ -0.1
COL6A1-202ENST00000463060 STEAP4Q687X5 459 aa14.4□□□□□ -0.1
COL6A1-202ENST00000463060 CRTC1Q6UUV9 634 aa14.4□□□□□ -0.1
COL6A1-202ENST00000463060 CEP128Q6ZU80 1094 aa14.4□□□□□ -0.1
COL6A1-202ENST00000463060 ERN2Q76MJ5 926 aaKnown RBP14.4□□□□□ -0.1
COL6A1-202ENST00000463060 TTC7BQ86TV6 843 aa14.4□□□□□ -0.1
COL6A1-202ENST00000463060 CCDC25Q86WR0 208 aa14.4□□□□□ -0.1
COL6A1-202ENST00000463060 SPEM1Q8N4L4 309 aa14.4□□□□□ -0.1
COL6A1-202ENST00000463060 MREGQ8N565 214 aa14.4□□□□□ -0.1
COL6A1-202ENST00000463060 PTCD2Q8WV60 388 aaKnown RBP14.4□□□□□ -0.1
COL6A1-202ENST00000463060 ERLEC1Q96DZ1 483 aa14.4□□□□□ -0.1
COL6A1-202ENST00000463060 ZNF778Q96MU6 729 aa14.4□□□□□ -0.1
COL6A1-202ENST00000463060 SRPK1Q96SB4 655 aaKnown RBP14.4□□□□□ -0.1
COL6A1-202ENST00000463060 C19orf43Q9BQ61 176 aa14.4□□□□□ -0.1
COL6A1-202ENST00000463060 NAT9Q9BTE0 207 aa14.4□□□□□ -0.1
COL6A1-202ENST00000463060 SLC6A17Q9H1V8 727 aa14.4□□□□□ -0.1
COL6A1-202ENST00000463060 TRABDQ9H4I3 376 aa14.4□□□□□ -0.1
COL6A1-202ENST00000463060 MRM3Q9HC36 420 aaKnown RBP14.4□□□□□ -0.1
COL6A1-202ENST00000463060 CHRAC1Q9NRG0 131 aa14.4□□□□□ -0.1
COL6A1-202ENST00000463060 NINJ2Q9NZG7 142 aa14.4□□□□□ -0.1
COL6A1-202ENST00000463060 HACD3Q9P035 362 aa14.4□□□□□ -0.1
COL6A1-202ENST00000463060 SCML1Q9UN30 329 aa14.4□□□□□ -0.1
COL6A1-202ENST00000463060 MYLKQ15746 1914 aa14.4□□□□□ -0.1
COL6A1-202ENST00000463060 FAM237BA0A1B0GVD1 139 aa14.39□□□□□ -0.11
COL6A1-202ENST00000463060 NPIPB15A6NHN6 443 aaPredicted RBP14.39□□□□□ -0.11
COL6A1-202ENST00000463060 AURKAO14965 403 aa14.39□□□□□ -0.11
COL6A1-202ENST00000463060 PI15O43692 258 aa14.39□□□□□ -0.11
COL6A1-202ENST00000463060 NDUFV2P19404 249 aa14.39□□□□□ -0.11
COL6A1-202ENST00000463060 ABL2P42684 1182 aa14.39□□□□□ -0.11
COL6A1-202ENST00000463060 TNNT3P45378 269 aaPredicted RBP14.39□□□□□ -0.11
COL6A1-202ENST00000463060 DGKEP52429 567 aa14.39□□□□□ -0.11
COL6A1-202ENST00000463060 EPHB1P54762 984 aa14.39□□□□□ -0.11
COL6A1-202ENST00000463060 TAS2R38P59533 333 aa14.39□□□□□ -0.11
COL6A1-202ENST00000463060 GPX6P59796 221 aa14.39□□□□□ -0.11
COL6A1-202ENST00000463060 ACVR1Q04771 509 aa14.39□□□□□ -0.11
COL6A1-202ENST00000463060 CNTN1Q12860 1018 aa14.39□□□□□ -0.11
COL6A1-202ENST00000463060 TAF1AQ15573 450 aaPredicted RBP14.39□□□□□ -0.11
COL6A1-202ENST00000463060 KYNUQ16719 465 aa14.39□□□□□ -0.11
COL6A1-202ENST00000463060 POM121L1PQ3SYA9 428 aa14.39□□□□□ -0.11
COL6A1-202ENST00000463060 UBAP2Q5T6F2 1119 aaKnown RBP14.39□□□□□ -0.11
COL6A1-202ENST00000463060 PIP5KL1Q5T9C9 394 aa14.39□□□□□ -0.11
COL6A1-202ENST00000463060 DENND2CQ68D51 928 aa14.39□□□□□ -0.11
COL6A1-202ENST00000463060 TRMT10CQ7L0Y3 403 aaKnown RBP14.39□□□□□ -0.11
COL6A1-202ENST00000463060 CCNJLQ8IV13 435 aa14.39□□□□□ -0.11
COL6A1-202ENST00000463060 ANKMY2Q8IV38 441 aa14.39□□□□□ -0.11
COL6A1-202ENST00000463060 ZBED8Q8IZ13 594 aa14.39□□□□□ -0.11
COL6A1-202ENST00000463060 FBXO36Q8NEA4 188 aa14.39□□□□□ -0.11
COL6A1-202ENST00000463060 STAMBPL1Q96FJ0 436 aa14.39□□□□□ -0.11
COL6A1-202ENST00000463060 PPP1R16AQ96I34 528 aa14.39□□□□□ -0.11
COL6A1-202ENST00000463060 FCRL3Q96P31 734 aaPredicted RBP14.39□□□□□ -0.11
COL6A1-202ENST00000463060 TRIM56Q9BRZ2 755 aaKnown RBP14.39□□□□□ -0.11
COL6A1-202ENST00000463060 PABPC3Q9H361 631 aaKnown RBP14.39□□□□□ -0.11
COL6A1-202ENST00000463060 CDC42EP4Q9H3Q1 356 aaKnown RBP14.39□□□□□ -0.11
COL6A1-202ENST00000463060 LRRC4CQ9HCJ2 640 aa14.39□□□□□ -0.11
COL6A1-202ENST00000463060 PCDH12Q9NPG4 1184 aa14.39□□□□□ -0.11
COL6A1-202ENST00000463060 TREX1Q9NSU2 369 aa14.39□□□□□ -0.11
COL6A1-202ENST00000463060 B4GALT6Q9UBX8 382 aa14.39□□□□□ -0.11
COL6A1-202ENST00000463060 TCAF1Q9Y4C2 921 aa14.39□□□□□ -0.11
COL6A1-202ENST00000463060 KCTD3Q9Y597 815 aa14.39□□□□□ -0.11
COL6A1-202ENST00000463060 A0A0U1RQS6 177 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 ZCWPW2A0A1B0GU75 182 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 HEATR9A2RTY3 570 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 C10orf142B7Z368 130 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 PLK4O00444 970 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 AP1G1O43747 822 aa14.38□□□□□ -0.11
COL6A1-202ENST00000463060 PAPSS2O95340 614 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms