RNA–Protein interactions for RNA: ENST00000462542.5

PCCB-203, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-203ENST00000462542 KIAA1143Q96AT1 154 aaPredicted RBP11.73□□□□□ -0.53
PCCB-203ENST00000462542 PDXPQ96GD0 296 aa11.73□□□□□ -0.53
PCCB-203ENST00000462542 ABHD17AQ96GS6 310 aa11.73□□□□□ -0.53
PCCB-203ENST00000462542 TEFMQ96QE5 360 aaKnown RBP11.73□□□□□ -0.53
PCCB-203ENST00000462542 TMEM168Q9H0V1 697 aa11.73□□□□□ -0.53
PCCB-203ENST00000462542 SUV39H2Q9H5I1 410 aa11.73□□□□□ -0.53
PCCB-203ENST00000462542 NDFIP2Q9NV92 336 aa11.73□□□□□ -0.53
PCCB-203ENST00000462542 TMEM248Q9NWD8 314 aa11.73□□□□□ -0.53
PCCB-203ENST00000462542 SLC39A1Q9NY26 324 aa11.73□□□□□ -0.53
PCCB-203ENST00000462542 APEX2Q9UBZ4 518 aa11.73□□□□□ -0.53
PCCB-203ENST00000462542 DNAI1Q9UI46 699 aa11.73□□□□□ -0.53
PCCB-203ENST00000462542 PLAAQ9Y263 795 aa11.73□□□□□ -0.53
PCCB-203ENST00000462542 DAAM1Q9Y4D1 1078 aa11.73□□□□□ -0.53
PCCB-203ENST00000462542 B3GALT1Q9Y5Z6 326 aa11.73□□□□□ -0.53
PCCB-203ENST00000462542 CREBBPQ92793 2442 aa11.72□□□□□ -0.53
PCCB-203ENST00000462542 LRP4O75096 1905 aa11.72□□□□□ -0.53
PCCB-203ENST00000462542 TMEM202A6NGA9 273 aa11.72□□□□□ -0.53
PCCB-203ENST00000462542 B4E171 279 aa11.72□□□□□ -0.53
PCCB-203ENST00000462542 NKX2-8O15522 239 aa11.72□□□□□ -0.53
PCCB-203ENST00000462542 RAD1O60671 282 aa11.72□□□□□ -0.53
PCCB-203ENST00000462542 TMCC1O94876 653 aa11.72□□□□□ -0.53
PCCB-203ENST00000462542 PCCBP05166 539 aa11.72□□□□□ -0.53
PCCB-203ENST00000462542 CD44P16070 742 aaKnown RBP11.72□□□□□ -0.53
PCCB-203ENST00000462542 SLC9A1P19634 815 aa11.72□□□□□ -0.53
PCCB-203ENST00000462542 TRIM23P36406 574 aa11.72□□□□□ -0.53
PCCB-203ENST00000462542 TSPAN7P41732 249 aa11.72□□□□□ -0.53
PCCB-203ENST00000462542 RAB15P59190 212 aa11.72□□□□□ -0.53
PCCB-203ENST00000462542 RHOAP61586 193 aa11.72□□□□□ -0.53
PCCB-203ENST00000462542 CRTC2Q53ET0 693 aaPredicted RBP11.72□□□□□ -0.53
PCCB-203ENST00000462542 LACTB2Q53H82 288 aaPredicted RBP11.72□□□□□ -0.53
PCCB-203ENST00000462542 KLHL10Q6JEL2 608 aa11.72□□□□□ -0.53
PCCB-203ENST00000462542 RWDD4Q6NW29 188 aaKnown RBP11.72□□□□□ -0.53
PCCB-203ENST00000462542 GJB7Q6PEY0 223 aa11.72□□□□□ -0.53
PCCB-203ENST00000462542 BRAT1Q6PJG6 821 aa11.72□□□□□ -0.53
PCCB-203ENST00000462542 GBP6Q6ZN66 633 aa11.72□□□□□ -0.53
PCCB-203ENST00000462542 FAM131BQ86XD5 332 aa11.72□□□□□ -0.53
PCCB-203ENST00000462542 RCBTB1Q8NDN9 531 aa11.72□□□□□ -0.53
PCCB-203ENST00000462542 NELFBQ8WX92 580 aa11.72□□□□□ -0.53
PCCB-203ENST00000462542 ART4Q93070 314 aa11.72□□□□□ -0.53
PCCB-203ENST00000462542 FUBP1Q96AE4 644 aaKnown RBP11.72□□□□□ -0.53
PCCB-203ENST00000462542 TIGD1Q96MW7 591 aa11.72□□□□□ -0.53
PCCB-203ENST00000462542 ZNF641Q96N77 438 aaPredicted RBP11.72□□□□□ -0.53
PCCB-203ENST00000462542 CRACR2AQ9BSW2 395 aa11.72□□□□□ -0.53
PCCB-203ENST00000462542 PDCL3Q9H2J4 239 aa11.72□□□□□ -0.53
PCCB-203ENST00000462542 GPN2Q9H9Y4 310 aaPredicted RBP11.72□□□□□ -0.53
PCCB-203ENST00000462542 PCDH12Q9NPG4 1184 aa11.72□□□□□ -0.53
PCCB-203ENST00000462542 PLEKHB1Q9UF11 243 aaPredicted RBP11.72□□□□□ -0.53
PCCB-203ENST00000462542 PILRAQ9UKJ1 303 aa11.72□□□□□ -0.53
PCCB-203ENST00000462542 SPTBN1Q01082 2364 aaKnown RBP11.71□□□□□ -0.53
PCCB-203ENST00000462542 TSPAN11A1L157 253 aa11.71□□□□□ -0.53
PCCB-203ENST00000462542 PRR19A6NJB7 356 aa11.71□□□□□ -0.53
PCCB-203ENST00000462542 PPP1R3GB7ZBB8 358 aa11.71□□□□□ -0.53
PCCB-203ENST00000462542 FGF1P05230 155 aa11.71□□□□□ -0.53
PCCB-203ENST00000462542 CCNB1P14635 433 aa11.71□□□□□ -0.53
PCCB-203ENST00000462542 CDH5P33151 784 aaPredicted RBP11.71□□□□□ -0.53
PCCB-203ENST00000462542 MAN1A1P33908 653 aa11.71□□□□□ -0.53
PCCB-203ENST00000462542 CLCN1P35523 988 aa11.71□□□□□ -0.53
PCCB-203ENST00000462542 FLT3P36888 993 aa11.71□□□□□ -0.53
PCCB-203ENST00000462542 YBEYP58557 167 aaPredicted RBP11.71□□□□□ -0.53
PCCB-203ENST00000462542 BIRC2Q13490 618 aa11.71□□□□□ -0.53
PCCB-203ENST00000462542 CFAP58Q5T655 872 aa11.71□□□□□ -0.53
PCCB-203ENST00000462542 MANEALQ5VSG8 457 aa11.71□□□□□ -0.53
PCCB-203ENST00000462542 ISM2Q6H9L7 571 aa11.71□□□□□ -0.53
PCCB-203ENST00000462542 LEKR1Q6ZMV7 388 aa11.71□□□□□ -0.53
PCCB-203ENST00000462542 SLC47A2Q86VL8 602 aa11.71□□□□□ -0.53
PCCB-203ENST00000462542 XYLT1Q86Y38 959 aa11.71□□□□□ -0.53
PCCB-203ENST00000462542 DNAAF5Q86Y56 855 aa11.71□□□□□ -0.53
PCCB-203ENST00000462542 ELOA2Q8IYF1 753 aaPredicted RBP11.71□□□□□ -0.53
PCCB-203ENST00000462542 NLGN4XQ8N0W4 816 aa11.71□□□□□ -0.53
PCCB-203ENST00000462542 MSANTD4Q8NCY6 345 aa11.71□□□□□ -0.53
PCCB-203ENST00000462542 NLGN4YQ8NFZ3 816 aaPredicted RBP11.71□□□□□ -0.53
PCCB-203ENST00000462542 ZDHHC1Q8WTX9 485 aa11.71□□□□□ -0.53
PCCB-203ENST00000462542 CCDC74BQ96LY2 380 aa11.71□□□□□ -0.53
PCCB-203ENST00000462542 NCAPGQ9BPX3 1015 aa11.71□□□□□ -0.53
PCCB-203ENST00000462542 NUDT22Q9BRQ3 303 aa11.71□□□□□ -0.53
PCCB-203ENST00000462542 ZPBPQ9BS86 351 aa11.71□□□□□ -0.53
PCCB-203ENST00000462542 SPRY4Q9C004 299 aa11.71□□□□□ -0.53
PCCB-203ENST00000462542 TRIT1Q9H3H1 467 aaKnown RBP11.71□□□□□ -0.53
PCCB-203ENST00000462542 CYP4F12Q9HCS2 524 aa11.71□□□□□ -0.53
PCCB-203ENST00000462542 MRPL40Q9NQ50 206 aaKnown RBP11.71□□□□□ -0.53
PCCB-203ENST00000462542 SPATS2LQ9NUQ6 558 aaKnown RBP11.71□□□□□ -0.53
PCCB-203ENST00000462542 TMEM59LQ9UK28 342 aa11.71□□□□□ -0.53
PCCB-203ENST00000462542 ZDHHC9Q9Y397 364 aa11.71□□□□□ -0.53
PCCB-203ENST00000462542 ITPR2Q14571 2701 aa11.71□□□□□ -0.54
PCCB-203ENST00000462542 ARHGEF17Q96PE2 2063 aaPredicted RBP11.71□□□□□ -0.54
PCCB-203ENST00000462542 GTPBP10A4D1E9 387 aaKnown RBP11.7□□□□□ -0.54
PCCB-203ENST00000462542 GOLGA6L4A6NEF3 574 aa11.7□□□□□ -0.54
PCCB-203ENST00000462542 FOXN3O00409 490 aaPredicted RBP11.7□□□□□ -0.54
PCCB-203ENST00000462542 MMP12P39900 470 aa11.7□□□□□ -0.54
PCCB-203ENST00000462542 POLR2LP62875 67 aaKnown RBP11.7□□□□□ -0.54
PCCB-203ENST00000462542 RAPGEF1Q13905 1077 aa11.7□□□□□ -0.54
PCCB-203ENST00000462542 EXOC3L4Q17RC7 722 aa11.7□□□□□ -0.54
PCCB-203ENST00000462542 DEFB109BQ30KR1 87 aa11.7□□□□□ -0.54
PCCB-203ENST00000462542 KCTD16Q68DU8 428 aa11.7□□□□□ -0.54
PCCB-203ENST00000462542 TMEM71Q6P5X7 295 aa11.7□□□□□ -0.54
PCCB-203ENST00000462542 NYAP1Q6ZVC0 841 aa11.7□□□□□ -0.54
PCCB-203ENST00000462542 ZNF354CQ86Y25 554 aa11.7□□□□□ -0.54
PCCB-203ENST00000462542 SFTPA2Q8IWL1 248 aa11.7□□□□□ -0.54
PCCB-203ENST00000462542 TEX19Q8NA77 164 aa11.7□□□□□ -0.54
PCCB-203ENST00000462542 PLA2G15Q8NCC3 412 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms