RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 STRADAQ7RTN6 431 aa10.92□□□□□ -0.66
CBX3-205ENST00000462165 PIM3Q86V86 326 aa10.92□□□□□ -0.66
CBX3-205ENST00000462165 PTRH1Q86Y79 214 aaKnown RBP10.92□□□□□ -0.66
CBX3-205ENST00000462165 SFTPA2Q8IWL1 248 aa10.92□□□□□ -0.66
CBX3-205ENST00000462165 NETO2Q8NC67 525 aa10.92□□□□□ -0.66
CBX3-205ENST00000462165 PLA2G15Q8NCC3 412 aa10.92□□□□□ -0.66
CBX3-205ENST00000462165 OR56A4Q8NGH8 313 aa10.92□□□□□ -0.66
CBX3-205ENST00000462165 FUBP1Q96AE4 644 aaKnown RBP10.92□□□□□ -0.66
CBX3-205ENST00000462165 SEMA6CQ9H3T2 930 aa10.92□□□□□ -0.66
CBX3-205ENST00000462165 SUV39H2Q9H5I1 410 aa10.92□□□□□ -0.66
CBX3-205ENST00000462165 NOL6Q9H6R4 1146 aaKnown RBP10.92□□□□□ -0.66
CBX3-205ENST00000462165 PCDH12Q9NPG4 1184 aa10.92□□□□□ -0.66
CBX3-205ENST00000462165 AKAP7Q9P0M2 348 aaPredicted RBP10.92□□□□□ -0.66
CBX3-205ENST00000462165 LHX3Q9UBR4 397 aa10.92□□□□□ -0.66
CBX3-205ENST00000462165 TUBD1Q9UJT1 453 aa10.92□□□□□ -0.66
CBX3-205ENST00000462165 DAAM1Q9Y4D1 1078 aa10.92□□□□□ -0.66
CBX3-205ENST00000462165 UTP20O75691 2785 aaKnown RBP10.92□□□□□ -0.66
CBX3-205ENST00000462165 LRRK2Q5S007 2527 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 FAM170AA1A519 330 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 CLEC18AA5D8T8 446 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 TMEM202A6NGA9 273 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 B4DGG1 531 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 CACNB4O00305 520 aaPredicted RBP10.91□□□□□ -0.66
CBX3-205ENST00000462165 TNFRSF10CO14798 259 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 HGSO14964 777 aaPredicted RBP10.91□□□□□ -0.66
CBX3-205ENST00000462165 B4GAT1O43505 415 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 CPNE6O95741 557 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 GP1BBP13224 206 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 CCL4P13236 92 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 KELP23276 732 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 SDC4P31431 198 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 MMP12P39900 470 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 MTIF2P46199 727 aaKnown RBP10.91□□□□□ -0.66
CBX3-205ENST00000462165 ATP1A2P50993 1020 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 ARSDP51689 593 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 YBEYP58557 167 aaPredicted RBP10.91□□□□□ -0.66
CBX3-205ENST00000462165 KCNAB2Q13303 367 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 RAPGEF1Q13905 1077 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 NR1D2Q14995 579 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 CYTH1Q15438 398 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 MAN2A1Q16706 1144 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 CCDC14Q49A88 953 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 EFHC2Q5JST6 749 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 ERAP2Q6P179 960 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 CLEC18BQ6UXF7 455 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 ZNF438Q7Z4V0 828 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 NOP9Q86U38 636 aaKnown RBP10.91□□□□□ -0.66
CBX3-205ENST00000462165 C17orf82Q86X59 251 aaPredicted RBP10.91□□□□□ -0.66
CBX3-205ENST00000462165 ZNF354CQ86Y25 554 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 DNAAF5Q86Y56 855 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 CCDC185Q8N715 623 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 RTL3Q8N8U3 475 aaKnown RBP10.91□□□□□ -0.66
CBX3-205ENST00000462165 CLEC18CQ8NCF0 446 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 GPBAR1Q8TDU6 330 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 RXFP2Q8WXD0 754 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 CPA5Q8WXQ8 436 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 CENPIQ92674 756 aaPredicted RBP10.91□□□□□ -0.66
CBX3-205ENST00000462165 NKD1Q969G9 470 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 NTAN1Q96AB6 310 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 EXOC2Q96KP1 924 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 TAAR9Q96RI9 348 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 NCAPGQ9BPX3 1015 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 KLC2Q9H0B6 622 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 TMEM168Q9H0V1 697 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 CDH19Q9H159 772 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 EPN3Q9H201 632 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 DPEP2Q9H4A9 486 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 RDH14Q9HBH5 336 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 FGF22Q9HCT0 170 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 MRPL40Q9NQ50 206 aaKnown RBP10.91□□□□□ -0.66
CBX3-205ENST00000462165 PCDHGA3Q9Y5H0 932 aa10.91□□□□□ -0.66
CBX3-205ENST00000462165 C2CD4BA6NLJ0 364 aa10.9□□□□□ -0.66
CBX3-205ENST00000462165 MMEP08473 750 aa10.9□□□□□ -0.66
CBX3-205ENST00000462165 FGF3P11487 239 aaPredicted RBP10.9□□□□□ -0.66
CBX3-205ENST00000462165 TRIM23P36406 574 aa10.9□□□□□ -0.66
CBX3-205ENST00000462165 PTPN9P43378 593 aa10.9□□□□□ -0.66
CBX3-205ENST00000462165 POLE2P56282 527 aa10.9□□□□□ -0.66
CBX3-205ENST00000462165 HDAC4P56524 1084 aa10.9□□□□□ -0.66
CBX3-205ENST00000462165 FOXK1P85037 733 aa10.9□□□□□ -0.66
CBX3-205ENST00000462165 SERINC3Q13530 473 aa10.9□□□□□ -0.66
CBX3-205ENST00000462165 SKIDA1Q1XH10 827 aa10.9□□□□□ -0.66
CBX3-205ENST00000462165 NAA35Q5VZE5 725 aa10.9□□□□□ -0.66
CBX3-205ENST00000462165 BRAT1Q6PJG6 821 aa10.9□□□□□ -0.66
CBX3-205ENST00000462165 ZSWIM9Q86XI8 627 aa10.9□□□□□ -0.66
CBX3-205ENST00000462165 CCL4L1Q8NHW4 92 aa10.9□□□□□ -0.66
CBX3-205ENST00000462165 KIAA1524Q8TCG1 905 aa10.9□□□□□ -0.66
CBX3-205ENST00000462165 EPS8L1Q8TE68 723 aa10.9□□□□□ -0.66
CBX3-205ENST00000462165 JPH3Q8WXH2 748 aaPredicted RBP10.9□□□□□ -0.66
CBX3-205ENST00000462165 ZNF641Q96N77 438 aaPredicted RBP10.9□□□□□ -0.66
CBX3-205ENST00000462165 NAA15Q9BXJ9 866 aaKnown RBP10.9□□□□□ -0.66
CBX3-205ENST00000462165 ATP8A1Q9Y2Q0 1164 aa10.9□□□□□ -0.66
CBX3-205ENST00000462165 FHOD1Q9Y613 1164 aa10.9□□□□□ -0.66
CBX3-205ENST00000462165 IGHV5-10-1A0A0J9YXX1 117 aa10.89□□□□□ -0.67
CBX3-205ENST00000462165 WASH4PA8MWX3 477 aa10.89□□□□□ -0.67
CBX3-205ENST00000462165 RASA4BC9J798 803 aa10.89□□□□□ -0.67
CBX3-205ENST00000462165 ZW10O43264 779 aa10.89□□□□□ -0.67
CBX3-205ENST00000462165 RASA4O43374 803 aa10.89□□□□□ -0.67
CBX3-205ENST00000462165 BUB1BO60566 1050 aaPredicted RBP10.89□□□□□ -0.67
CBX3-205ENST00000462165 RECQL5O94762 991 aaPredicted RBP10.89□□□□□ -0.67
CBX3-205ENST00000462165 CCNB1P14635 433 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms