RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 CTPS1P17812 591 aa10.64□□□□□ -0.71
TRAPPC12-213ENST00000461577 CSRP1P21291 193 aaKnown RBP10.64□□□□□ -0.71
TRAPPC12-213ENST00000461577 VIPR1P32241 457 aa10.64□□□□□ -0.71
TRAPPC12-213ENST00000461577 PTPN7P35236 360 aa10.64□□□□□ -0.71
TRAPPC12-213ENST00000461577 CD86P42081 329 aa10.64□□□□□ -0.71
TRAPPC12-213ENST00000461577 RABIFP47224 123 aa10.64□□□□□ -0.71
TRAPPC12-213ENST00000461577 ARRB1P49407 418 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC12-213ENST00000461577 NOVA1P51513 510 aaKnown RBP10.64□□□□□ -0.71
TRAPPC12-213ENST00000461577 IL9RQ01113 521 aa10.64□□□□□ -0.71
TRAPPC12-213ENST00000461577 ADCY2Q08462 1091 aa10.64□□□□□ -0.71
TRAPPC12-213ENST00000461577 NIPAL4Q0D2K0 466 aa10.64□□□□□ -0.71
TRAPPC12-213ENST00000461577 ZNF211Q13398 564 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC12-213ENST00000461577 ARHGEF7Q14155 803 aa10.64□□□□□ -0.71
TRAPPC12-213ENST00000461577 PRKD1Q15139 912 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC12-213ENST00000461577 PPM1JQ5JR12 505 aa10.64□□□□□ -0.71
TRAPPC12-213ENST00000461577 PRAMEF14Q5SWL7 426 aa10.64□□□□□ -0.71
TRAPPC12-213ENST00000461577 PSAPL1Q6NUJ1 521 aa10.64□□□□□ -0.71
TRAPPC12-213ENST00000461577 KYAT3Q6YP21 454 aaKnown RBP10.64□□□□□ -0.71
TRAPPC12-213ENST00000461577 Q6ZSR6 202 aa10.64□□□□□ -0.71
TRAPPC12-213ENST00000461577 USP45Q70EL2 814 aa10.64□□□□□ -0.71
TRAPPC12-213ENST00000461577 DPPA4Q7L190 304 aa10.64□□□□□ -0.71
TRAPPC12-213ENST00000461577 ERMP1Q7Z2K6 904 aa10.64□□□□□ -0.71
TRAPPC12-213ENST00000461577 ABI3BPQ7Z7G0 1075 aa10.64□□□□□ -0.71
TRAPPC12-213ENST00000461577 ZC3H18Q86VM9 953 aaKnown RBP10.64□□□□□ -0.71
TRAPPC12-213ENST00000461577 SPATS2Q86XZ4 545 aaKnown RBP10.64□□□□□ -0.71
TRAPPC12-213ENST00000461577 DCP2Q8IU60 420 aaKnown RBP10.64□□□□□ -0.71
TRAPPC12-213ENST00000461577 OR13H1Q8NG92 308 aa10.64□□□□□ -0.71
TRAPPC12-213ENST00000461577 ARRDC2Q8TBH0 407 aa10.64□□□□□ -0.71
TRAPPC12-213ENST00000461577 ALG3Q92685 438 aa10.64□□□□□ -0.71
TRAPPC12-213ENST00000461577 BMFQ96LC9 184 aa10.64□□□□□ -0.71
TRAPPC12-213ENST00000461577 ALS2CR12Q96Q35 445 aa10.64□□□□□ -0.71
TRAPPC12-213ENST00000461577 FERMT1Q9BQL6 677 aa10.64□□□□□ -0.71
TRAPPC12-213ENST00000461577 ERVMER34-1Q9H9K5 563 aa10.64□□□□□ -0.71
TRAPPC12-213ENST00000461577 LZTFL1Q9NQ48 299 aa10.64□□□□□ -0.71
TRAPPC12-213ENST00000461577 B4GALT6Q9UBX8 382 aa10.64□□□□□ -0.71
TRAPPC12-213ENST00000461577 CHKBQ9Y259 395 aa10.64□□□□□ -0.71
TRAPPC12-213ENST00000461577 PCDHGB2Q9Y5G2 931 aa10.64□□□□□ -0.71
TRAPPC12-213ENST00000461577 GOLGA6L9A6NEM1 432 aa10.63□□□□□ -0.71
TRAPPC12-213ENST00000461577 POM121BA6NF01 834 aa10.63□□□□□ -0.71
TRAPPC12-213ENST00000461577 DDX3YO15523 660 aaKnown RBP10.63□□□□□ -0.71
TRAPPC12-213ENST00000461577 FLRT2O43155 660 aa10.63□□□□□ -0.71
TRAPPC12-213ENST00000461577 SH3BP5O60239 455 aa10.63□□□□□ -0.71
TRAPPC12-213ENST00000461577 KCNK5O95279 499 aa10.63□□□□□ -0.71
TRAPPC12-213ENST00000461577 ITGAVP06756 1048 aa10.63□□□□□ -0.71
TRAPPC12-213ENST00000461577 PTPN3P26045 913 aa10.63□□□□□ -0.71
TRAPPC12-213ENST00000461577 IGFALSP35858 605 aa10.63□□□□□ -0.71
TRAPPC12-213ENST00000461577 OTUD4Q01804 1114 aaKnown RBP10.63□□□□□ -0.71
TRAPPC12-213ENST00000461577 RALGDSQ12967 914 aa10.63□□□□□ -0.71
TRAPPC12-213ENST00000461577 XRCC4Q13426 336 aa10.63□□□□□ -0.71
TRAPPC12-213ENST00000461577 LRRC14Q15048 493 aa10.63□□□□□ -0.71
TRAPPC12-213ENST00000461577 ACOX1Q15067 660 aa10.63□□□□□ -0.71
TRAPPC12-213ENST00000461577 NOMO1Q15155 1222 aa10.63□□□□□ -0.71
TRAPPC12-213ENST00000461577 IRF4Q15306 451 aa10.63□□□□□ -0.71
TRAPPC12-213ENST00000461577 INAVAQ3KP66 663 aa10.63□□□□□ -0.71
TRAPPC12-213ENST00000461577 TEX44Q53QW1 395 aa10.63□□□□□ -0.71
TRAPPC12-213ENST00000461577 SEL1L2Q5TEA6 688 aa10.63□□□□□ -0.71
TRAPPC12-213ENST00000461577 DENND2CQ68D51 928 aa10.63□□□□□ -0.71
TRAPPC12-213ENST00000461577 AADACL2Q6P093 401 aa10.63□□□□□ -0.71
TRAPPC12-213ENST00000461577 LIPIQ6XZB0 460 aa10.63□□□□□ -0.71
TRAPPC12-213ENST00000461577 ZNF662Q6ZS27 426 aa10.63□□□□□ -0.71
TRAPPC12-213ENST00000461577 PIP4P1Q86T03 277 aa10.63□□□□□ -0.71
TRAPPC12-213ENST00000461577 NAXDQ8IW45 347 aa10.63□□□□□ -0.71
TRAPPC12-213ENST00000461577 CNTD1Q8N815 330 aa10.63□□□□□ -0.71
TRAPPC12-213ENST00000461577 TP53I13Q8NBR0 393 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC12-213ENST00000461577 UBE2Q2Q8WVN8 375 aa10.63□□□□□ -0.71
TRAPPC12-213ENST00000461577 PIH1D2Q8WWB5 315 aa10.63□□□□□ -0.71
TRAPPC12-213ENST00000461577 SPOCK2Q92563 424 aa10.63□□□□□ -0.71
TRAPPC12-213ENST00000461577 CENPTQ96BT3 561 aa10.63□□□□□ -0.71
TRAPPC12-213ENST00000461577 HES6Q96HZ4 224 aa10.63□□□□□ -0.71
TRAPPC12-213ENST00000461577 QKIQ96PU8 341 aaKnown RBP eCLIP10.63□□□□□ -0.718e-8■■■■□ 26.5
TRAPPC12-213ENST00000461577 KLF6Q99612 283 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC12-213ENST00000461577 TDRD1Q9BXT4 1180 aaKnown RBP10.63□□□□□ -0.71
TRAPPC12-213ENST00000461577 SLC25A51Q9H1U9 297 aa10.63□□□□□ -0.71
TRAPPC12-213ENST00000461577 GLOD4Q9HC38 313 aa10.63□□□□□ -0.71
TRAPPC12-213ENST00000461577 PCDH9Q9HC56 1237 aa10.63□□□□□ -0.71
TRAPPC12-213ENST00000461577 MBNL1Q9NR56 388 aaKnown RBP10.63□□□□□ -0.71
TRAPPC12-213ENST00000461577 KLHL8Q9P2G9 620 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC12-213ENST00000461577 DMXL1Q9Y485 3027 aa10.63□□□□□ -0.71
TRAPPC12-213ENST00000461577 LAMA1P25391 3075 aa10.63□□□□□ -0.71
TRAPPC12-213ENST00000461577 CEP250Q9BV73 2442 aa10.63□□□□□ -0.71
TRAPPC12-213ENST00000461577 GOLGA8CPA6NN73 597 aa10.62□□□□□ -0.71
TRAPPC12-213ENST00000461577 TOR1BO14657 336 aa10.62□□□□□ -0.71
TRAPPC12-213ENST00000461577 PCDHGA12O60330 932 aa10.62□□□□□ -0.71
TRAPPC12-213ENST00000461577 FZD6O60353 706 aa10.62□□□□□ -0.71
TRAPPC12-213ENST00000461577 RECQL5O94762 991 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC12-213ENST00000461577 PCCBP05166 539 aa10.62□□□□□ -0.71
TRAPPC12-213ENST00000461577 MMP2P08253 660 aa10.62□□□□□ -0.71
TRAPPC12-213ENST00000461577 PDHA1P08559 390 aa10.62□□□□□ -0.71
TRAPPC12-213ENST00000461577 CEACAM1P13688 526 aa10.62□□□□□ -0.71
TRAPPC12-213ENST00000461577 RXRGP48443 463 aa10.62□□□□□ -0.71
TRAPPC12-213ENST00000461577 THOP1P52888 689 aa10.62□□□□□ -0.71
TRAPPC12-213ENST00000461577 EIF3EP60228 445 aaKnown RBP10.62□□□□□ -0.71
TRAPPC12-213ENST00000461577 RPL26P61254 145 aaKnown RBP10.62□□□□□ -0.71
TRAPPC12-213ENST00000461577 YPEL5P62699 121 aa10.62□□□□□ -0.71
TRAPPC12-213ENST00000461577 SKOR1P84550 965 aa10.62□□□□□ -0.71
TRAPPC12-213ENST00000461577 PDE1CQ14123 709 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC12-213ENST00000461577 PTK2BQ14289 1009 aa10.62□□□□□ -0.71
TRAPPC12-213ENST00000461577 WSCD2Q2TBF2 565 aa10.62□□□□□ -0.71
TRAPPC12-213ENST00000461577 FAM182AQ5T1J6 154 aa10.62□□□□□ -0.71
TRAPPC12-213ENST00000461577 DARS2Q6PI48 645 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms