RNA–Protein interactions for RNA: ENST00000461525.5

COL1A2-202, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL1A2, Length 776 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-202ENST00000461525 PERM1Q5SV97 790 aa17.79■□□□□ 0.44
COL1A2-202ENST00000461525 RD3Q7Z3Z2 195 aa17.79■□□□□ 0.44
COL1A2-202ENST00000461525 POLNQ7Z5Q5 900 aa17.79■□□□□ 0.44
COL1A2-202ENST00000461525 LSMEM2Q8N112 164 aa17.79■□□□□ 0.44
COL1A2-202ENST00000461525 WDR92Q96MX6 357 aa17.79■□□□□ 0.44
COL1A2-202ENST00000461525 CSPG4P5Q96PW8 444 aa17.79■□□□□ 0.44
COL1A2-202ENST00000461525 THAP2Q9H0W7 228 aa17.79■□□□□ 0.44
COL1A2-202ENST00000461525 POLR1BQ9H9Y6 1135 aa17.79■□□□□ 0.44
COL1A2-202ENST00000461525 PADI4Q9UM07 663 aa17.79■□□□□ 0.44
COL1A2-202ENST00000461525 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.78■□□□□ 0.44
COL1A2-202ENST00000461525 CACNB4O00305 520 aaPredicted RBP17.78■□□□□ 0.44
COL1A2-202ENST00000461525 TRAFD1O14545 582 aaPredicted RBP17.78■□□□□ 0.44
COL1A2-202ENST00000461525 SERPING1P05155 500 aa17.78■□□□□ 0.44
COL1A2-202ENST00000461525 RARAP10276 462 aa17.78■□□□□ 0.44
COL1A2-202ENST00000461525 HSPA9P38646 679 aaKnown RBP17.78■□□□□ 0.44
COL1A2-202ENST00000461525 PBX1P40424 430 aa17.78■□□□□ 0.44
COL1A2-202ENST00000461525 LSSP48449 732 aa17.78■□□□□ 0.44
COL1A2-202ENST00000461525 UBASH3AP57075 661 aa17.78■□□□□ 0.44
COL1A2-202ENST00000461525 SRP54P61011 504 aaKnown RBP17.78■□□□□ 0.44
COL1A2-202ENST00000461525 ZBED6P86452 979 aa17.78■□□□□ 0.44
COL1A2-202ENST00000461525 CCDC173Q0VFZ6 552 aa17.78■□□□□ 0.44
COL1A2-202ENST00000461525 COL9A2Q14055 689 aaPredicted RBP17.78■□□□□ 0.44
COL1A2-202ENST00000461525 TCEA2Q15560 299 aa17.78■□□□□ 0.44
COL1A2-202ENST00000461525 LVRNQ6Q4G3 990 aa17.78■□□□□ 0.44
COL1A2-202ENST00000461525 LIPIQ6XZB0 460 aa17.78■□□□□ 0.44
COL1A2-202ENST00000461525 RBM44Q6ZP01 1051 aaKnown RBP17.78■□□□□ 0.44
COL1A2-202ENST00000461525 DPPA4Q7L190 304 aa17.78■□□□□ 0.44
COL1A2-202ENST00000461525 BBS5Q8N3I7 341 aa17.78■□□□□ 0.44
COL1A2-202ENST00000461525 ARL10Q8N8L6 244 aa17.78■□□□□ 0.44
COL1A2-202ENST00000461525 PCDH19Q8TAB3 1148 aa17.78■□□□□ 0.44
COL1A2-202ENST00000461525 WDR48Q8TAF3 677 aa17.78■□□□□ 0.44
COL1A2-202ENST00000461525 TEKT4Q8WW24 435 aa17.78■□□□□ 0.44
COL1A2-202ENST00000461525 GRAMD1AQ96CP6 724 aa17.78■□□□□ 0.44
COL1A2-202ENST00000461525 IQCDQ96DY2 449 aa17.78■□□□□ 0.44
COL1A2-202ENST00000461525 ZNF578Q96N58 590 aaPredicted RBP17.78■□□□□ 0.44
COL1A2-202ENST00000461525 ETNK2Q9NVF9 386 aa17.78■□□□□ 0.44
COL1A2-202ENST00000461525 GULP1Q9UBP9 304 aa17.78■□□□□ 0.44
COL1A2-202ENST00000461525 IP6K2Q9UHH9 426 aa17.78■□□□□ 0.44
COL1A2-202ENST00000461525 ANAPC7Q9UJX3 599 aa17.78■□□□□ 0.44
COL1A2-202ENST00000461525 TDRD6O60522 2096 aaKnown RBP17.78■□□□□ 0.44
COL1A2-202ENST00000461525 GOLGA6L19H0YKK7 550 aa17.77■□□□□ 0.44
COL1A2-202ENST00000461525 SOCS5O75159 536 aa17.77■□□□□ 0.44
COL1A2-202ENST00000461525 TCEA3O75764 348 aa17.77■□□□□ 0.44
COL1A2-202ENST00000461525 DXOO77932 396 aaKnown RBP17.77■□□□□ 0.44
COL1A2-202ENST00000461525 SERPINB6P35237 376 aa17.77■□□□□ 0.44
COL1A2-202ENST00000461525 PCBP4P57723 403 aaKnown RBP17.77■□□□□ 0.44
COL1A2-202ENST00000461525 KIAA1024LP59773 190 aa17.77■□□□□ 0.44
COL1A2-202ENST00000461525 GKN2Q86XP6 184 aa17.77■□□□□ 0.44
COL1A2-202ENST00000461525 SDR16C5Q8N3Y7 309 aa17.77■□□□□ 0.44
COL1A2-202ENST00000461525 ATPAF2Q8N5M1 289 aa17.77■□□□□ 0.44
COL1A2-202ENST00000461525 NIPA2Q8N8Q9 360 aa17.77■□□□□ 0.44
COL1A2-202ENST00000461525 PLA2G15Q8NCC3 412 aa17.77■□□□□ 0.44
COL1A2-202ENST00000461525 ZNF248Q8NDW4 579 aa17.77■□□□□ 0.44
COL1A2-202ENST00000461525 NSMCE1Q8WV22 266 aa17.77■□□□□ 0.44
COL1A2-202ENST00000461525 CPLX3Q8WVH0 158 aa17.77■□□□□ 0.44
COL1A2-202ENST00000461525 PDXPQ96GD0 296 aa17.77■□□□□ 0.44
COL1A2-202ENST00000461525 LGMNQ99538 433 aa17.77■□□□□ 0.44
COL1A2-202ENST00000461525 NUP85Q9BW27 656 aa17.77■□□□□ 0.44
COL1A2-202ENST00000461525 SYNDIG1Q9H7V2 258 aa17.77■□□□□ 0.44
COL1A2-202ENST00000461525 PCDH18Q9HCL0 1135 aa17.77■□□□□ 0.44
COL1A2-202ENST00000461525 SIRPGQ9P1W8 387 aa17.77■□□□□ 0.44
COL1A2-202ENST00000461525 B4GALT6Q9UBX8 382 aa17.77■□□□□ 0.44
COL1A2-202ENST00000461525 GPR34Q9UPC5 381 aa17.77■□□□□ 0.44
COL1A2-202ENST00000461525 A0A1W2PQ67 120 aa17.76■□□□□ 0.43
COL1A2-202ENST00000461525 A8MX80 341 aa17.76■□□□□ 0.43
COL1A2-202ENST00000461525 MAFKO60675 156 aa17.76■□□□□ 0.43
COL1A2-202ENST00000461525 PEX11BO96011 259 aa17.76■□□□□ 0.43
COL1A2-202ENST00000461525 TNFP01375 233 aa17.76■□□□□ 0.43
COL1A2-202ENST00000461525 KELP23276 732 aa17.76■□□□□ 0.43
COL1A2-202ENST00000461525 KRT81Q14533 505 aa17.76■□□□□ 0.43
COL1A2-202ENST00000461525 ACOX1Q15067 660 aa17.76■□□□□ 0.43
COL1A2-202ENST00000461525 NFKBIBQ15653 356 aa17.76■□□□□ 0.43
COL1A2-202ENST00000461525 TXNRD3NBQ6F5E7 133 aa17.76■□□□□ 0.43
COL1A2-202ENST00000461525 KYQ8NBH2 561 aa17.76■□□□□ 0.43
COL1A2-202ENST00000461525 OR56A4Q8NGH8 313 aa17.76■□□□□ 0.43
COL1A2-202ENST00000461525 PDCD6IPQ8WUM4 868 aaKnown RBP17.76■□□□□ 0.43
COL1A2-202ENST00000461525 SPOCK2Q92563 424 aa17.76■□□□□ 0.43
COL1A2-202ENST00000461525 ATXN7L3BQ96GX2 97 aa17.76■□□□□ 0.43
COL1A2-202ENST00000461525 BTBD6Q96KE9 485 aa17.76■□□□□ 0.43
COL1A2-202ENST00000461525 NSMCE3Q96MG7 304 aa17.76■□□□□ 0.43
COL1A2-202ENST00000461525 NUDCD1Q96RS6 583 aa17.76■□□□□ 0.43
COL1A2-202ENST00000461525 CCDC3Q9BQI4 270 aa17.76■□□□□ 0.43
COL1A2-202ENST00000461525 MGME1Q9BQP7 344 aa17.76■□□□□ 0.43
COL1A2-202ENST00000461525 CAPN11Q9UMQ6 739 aa17.76■□□□□ 0.43
COL1A2-202ENST00000461525 LUC7L2Q9Y383 392 aaKnown RBP17.76■□□□□ 0.43
COL1A2-202ENST00000461525 PCDHGC4Q9Y5F7 938 aa17.76■□□□□ 0.43
COL1A2-202ENST00000461525 DGKBQ9Y6T7 804 aa17.76■□□□□ 0.43
COL1A2-202ENST00000461525 ASXL3Q9C0F0 2248 aa17.76■□□□□ 0.43
COL1A2-202ENST00000461525 A0A087X0T9 212 aa17.75■□□□□ 0.43
COL1A2-202ENST00000461525 TTC24A2A3L6 582 aaPredicted RBP17.75■□□□□ 0.43
COL1A2-202ENST00000461525 HTRA2O43464 458 aaPredicted RBP17.75■□□□□ 0.43
COL1A2-202ENST00000461525 CPP00450 1065 aa17.75■□□□□ 0.43
COL1A2-202ENST00000461525 CYP1A2P05177 515 aa17.75■□□□□ 0.43
COL1A2-202ENST00000461525 FAM228BP0C875 321 aa17.75■□□□□ 0.43
COL1A2-202ENST00000461525 CR2P20023 1033 aa17.75■□□□□ 0.43
COL1A2-202ENST00000461525 NFKBIAP25963 317 aa17.75■□□□□ 0.43
COL1A2-202ENST00000461525 SSR1P43307 286 aaKnown RBP17.75■□□□□ 0.43
COL1A2-202ENST00000461525 ERVPABLB-1P60509 514 aa17.75■□□□□ 0.43
COL1A2-202ENST00000461525 SLC25A11Q02978 314 aaKnown RBP17.75■□□□□ 0.43
COL1A2-202ENST00000461525 TLE3Q04726 772 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms