RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 IL1R2P27930 398 aa22.9■■□□□ 1.26
PTPN4-207ENST00000460162 HSPA9P38646 679 aaKnown RBP22.9■■□□□ 1.26
PTPN4-207ENST00000460162 ERVPABLB-1P60509 514 aa22.9■■□□□ 1.26
PTPN4-207ENST00000460162 LBRQ14739 615 aaKnown RBP22.9■■□□□ 1.26
PTPN4-207ENST00000460162 SMTNL2Q2TAL5 461 aa22.9■■□□□ 1.26
PTPN4-207ENST00000460162 BOLA3Q53S33 107 aa22.9■■□□□ 1.26
PTPN4-207ENST00000460162 PERM1Q5SV97 790 aa22.9■■□□□ 1.26
PTPN4-207ENST00000460162 HGSNATQ68CP4 663 aa22.9■■□□□ 1.26
PTPN4-207ENST00000460162 IGF2-ASQ6U949 168 aa22.9■■□□□ 1.26
PTPN4-207ENST00000460162 TMCO3Q6UWJ1 677 aa22.9■■□□□ 1.26
PTPN4-207ENST00000460162 ENPP7Q6UWV6 458 aa22.9■■□□□ 1.26
PTPN4-207ENST00000460162 DPPA4Q7L190 304 aa22.9■■□□□ 1.26
PTPN4-207ENST00000460162 ZNF248Q8NDW4 579 aa22.9■■□□□ 1.26
PTPN4-207ENST00000460162 PCDH19Q8TAB3 1148 aa22.9■■□□□ 1.26
PTPN4-207ENST00000460162 SCG3Q8WXD2 468 aaKnown RBP22.9■■□□□ 1.26
PTPN4-207ENST00000460162 SYN2Q92777 582 aaPredicted RBP22.9■■□□□ 1.26
PTPN4-207ENST00000460162 WDR92Q96MX6 357 aa22.9■■□□□ 1.26
PTPN4-207ENST00000460162 PRORYQ9H606 182 aa22.9■■□□□ 1.26
PTPN4-207ENST00000460162 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.9■■□□□ 1.26
PTPN4-207ENST00000460162 KLQ9UEF7 1012 aa22.9■■□□□ 1.26
PTPN4-207ENST00000460162 OR1A2Q9Y585 309 aa22.9■■□□□ 1.26
PTPN4-207ENST00000460162 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.89■■□□□ 1.25
PTPN4-207ENST00000460162 A0A1W2PQ67 120 aa22.89■■□□□ 1.25
PTPN4-207ENST00000460162 CELA2BP08218 269 aaPredicted RBP22.89■■□□□ 1.25
PTPN4-207ENST00000460162 CTSEP14091 401 aa22.89■■□□□ 1.25
PTPN4-207ENST00000460162 SCNN1BP51168 640 aa22.89■■□□□ 1.25
PTPN4-207ENST00000460162 KIAA1024LP59773 190 aa22.89■■□□□ 1.25
PTPN4-207ENST00000460162 SRP54P61011 504 aaKnown RBP22.89■■□□□ 1.25
PTPN4-207ENST00000460162 PIGHQ14442 188 aaPredicted RBP22.89■■□□□ 1.25
PTPN4-207ENST00000460162 ZNF235Q14590 738 aa22.89■■□□□ 1.25
PTPN4-207ENST00000460162 NIPA2Q8N8Q9 360 aa22.89■■□□□ 1.25
PTPN4-207ENST00000460162 TEKT4Q8WW24 435 aa22.89■■□□□ 1.25
PTPN4-207ENST00000460162 TSACCQ96A04 125 aaPredicted RBP22.89■■□□□ 1.25
PTPN4-207ENST00000460162 HIC2Q96JB3 615 aa22.89■■□□□ 1.25
PTPN4-207ENST00000460162 UBL7Q96S82 380 aaPredicted RBP22.89■■□□□ 1.25
PTPN4-207ENST00000460162 PADI4Q9UM07 663 aa22.89■■□□□ 1.25
PTPN4-207ENST00000460162 FASNP49327 2511 aaKnown RBP22.89■■□□□ 1.25
PTPN4-207ENST00000460162 BPTFQ12830 3046 aa22.89■■□□□ 1.25
PTPN4-207ENST00000460162 SOCS5O75159 536 aa22.88■■□□□ 1.25
PTPN4-207ENST00000460162 RECQL5O94762 991 aaPredicted RBP22.88■■□□□ 1.25
PTPN4-207ENST00000460162 TCF4P15884 667 aa22.88■■□□□ 1.25
PTPN4-207ENST00000460162 SERPINB6P35237 376 aa22.88■■□□□ 1.25
PTPN4-207ENST00000460162 PBX1P40424 430 aa22.88■■□□□ 1.25
PTPN4-207ENST00000460162 TLE3Q04726 772 aa22.88■■□□□ 1.25
PTPN4-207ENST00000460162 SLC10A7Q0GE19 358 aa22.88■■□□□ 1.25
PTPN4-207ENST00000460162 CRTC1Q6UUV9 634 aa22.88■■□□□ 1.25
PTPN4-207ENST00000460162 LIPIQ6XZB0 460 aa22.88■■□□□ 1.25
PTPN4-207ENST00000460162 POLNQ7Z5Q5 900 aa22.88■■□□□ 1.25
PTPN4-207ENST00000460162 GKN2Q86XP6 184 aa22.88■■□□□ 1.25
PTPN4-207ENST00000460162 SPACA3Q8IXA5 215 aa22.88■■□□□ 1.25
PTPN4-207ENST00000460162 TP53INP2Q8IXH6 220 aa22.88■■□□□ 1.25
PTPN4-207ENST00000460162 HSPH1Q92598 858 aa22.88■■□□□ 1.25
PTPN4-207ENST00000460162 IQCDQ96DY2 449 aa22.88■■□□□ 1.25
PTPN4-207ENST00000460162 PDXPQ96GD0 296 aa22.88■■□□□ 1.25
PTPN4-207ENST00000460162 BBC3Q96PG8 261 aaPredicted RBP22.88■■□□□ 1.25
PTPN4-207ENST00000460162 CSPG4P5Q96PW8 444 aa22.88■■□□□ 1.25
PTPN4-207ENST00000460162 LGMNQ99538 433 aa22.88■■□□□ 1.25
PTPN4-207ENST00000460162 CCDC3Q9BQI4 270 aa22.88■■□□□ 1.25
PTPN4-207ENST00000460162 THSD1Q9NS62 852 aa22.88■■□□□ 1.25
PTPN4-207ENST00000460162 ENTPD2Q9Y5L3 495 aa22.88■■□□□ 1.25
PTPN4-207ENST00000460162 DGKBQ9Y6T7 804 aa22.88■■□□□ 1.25
PTPN4-207ENST00000460162 SHROOM3Q8TF72 1996 aa22.87■■□□□ 1.25
PTPN4-207ENST00000460162 CACNB4O00305 520 aaPredicted RBP22.87■■□□□ 1.25
PTPN4-207ENST00000460162 RARAP10276 462 aa22.87■■□□□ 1.25
PTPN4-207ENST00000460162 CR2P20023 1033 aa22.87■■□□□ 1.25
PTPN4-207ENST00000460162 KELP23276 732 aa22.87■■□□□ 1.25
PTPN4-207ENST00000460162 FANCCQ00597 558 aa22.87■■□□□ 1.25
PTPN4-207ENST00000460162 CCDC173Q0VFZ6 552 aa22.87■■□□□ 1.25
PTPN4-207ENST00000460162 C3orf38Q5JPI3 329 aa22.87■■□□□ 1.25
PTPN4-207ENST00000460162 BBS5Q8N3I7 341 aa22.87■■□□□ 1.25
PTPN4-207ENST00000460162 ATPAF2Q8N5M1 289 aa22.87■■□□□ 1.25
PTPN4-207ENST00000460162 KYQ8NBH2 561 aa22.87■■□□□ 1.25
PTPN4-207ENST00000460162 PLA2G15Q8NCC3 412 aa22.87■■□□□ 1.25
PTPN4-207ENST00000460162 FCRL3Q96P31 734 aaPredicted RBP22.87■■□□□ 1.25
PTPN4-207ENST00000460162 RBM15Q96T37 977 aaKnown RBP eCLIP22.87■■□□□ 1.25
PTPN4-207ENST00000460162 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.87■■□□□ 1.25
PTPN4-207ENST00000460162 THAP2Q9H0W7 228 aa22.87■■□□□ 1.25
PTPN4-207ENST00000460162 ASCL3Q9NQ33 180 aa22.87■■□□□ 1.25
PTPN4-207ENST00000460162 IP6K2Q9UHH9 426 aa22.87■■□□□ 1.25
PTPN4-207ENST00000460162 SATB2Q9UPW6 733 aa22.87■■□□□ 1.25
PTPN4-207ENST00000460162 HTRA2O43464 458 aaPredicted RBP22.86■■□□□ 1.25
PTPN4-207ENST00000460162 PEX11BO96011 259 aa22.86■■□□□ 1.25
PTPN4-207ENST00000460162 AMPD1P23109 780 aa22.86■■□□□ 1.25
PTPN4-207ENST00000460162 SLC25A11Q02978 314 aaKnown RBP22.86■■□□□ 1.25
PTPN4-207ENST00000460162 SPIDRQ14159 915 aa22.86■■□□□ 1.25
PTPN4-207ENST00000460162 RD3Q7Z3Z2 195 aa22.86■■□□□ 1.25
PTPN4-207ENST00000460162 OR56A4Q8NGH8 313 aa22.86■■□□□ 1.25
PTPN4-207ENST00000460162 FUBP1Q96AE4 644 aaKnown RBP22.86■■□□□ 1.25
PTPN4-207ENST00000460162 ATXN7L3BQ96GX2 97 aa22.86■■□□□ 1.25
PTPN4-207ENST00000460162 NSMCE3Q96MG7 304 aa22.86■■□□□ 1.25
PTPN4-207ENST00000460162 NUDCD1Q96RS6 583 aa22.86■■□□□ 1.25
PTPN4-207ENST00000460162 MGME1Q9BQP7 344 aa22.86■■□□□ 1.25
PTPN4-207ENST00000460162 CBX8Q9HC52 389 aa22.86■■□□□ 1.25
PTPN4-207ENST00000460162 PCDH18Q9HCL0 1135 aa22.86■■□□□ 1.25
PTPN4-207ENST00000460162 ETNK2Q9NVF9 386 aa22.86■■□□□ 1.25
PTPN4-207ENST00000460162 ANAPC7Q9UJX3 599 aa22.86■■□□□ 1.25
PTPN4-207ENST00000460162 PCDHGA8Q9Y5G5 932 aa22.86■■□□□ 1.25
PTPN4-207ENST00000460162 SYCE3A1L190 88 aa22.85■■□□□ 1.25
PTPN4-207ENST00000460162 MAFKO60675 156 aa22.85■■□□□ 1.25
PTPN4-207ENST00000460162 TNFP01375 233 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms