RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 ATP5C1P36542 298 aaKnown RBP15.13■□□□□ 0.01
LDLR-202ENST00000455727 SNX32Q86XE0 403 aa15.13■□□□□ 0.01
LDLR-202ENST00000455727 BBS5Q8N3I7 341 aa15.13■□□□□ 0.01
LDLR-202ENST00000455727 AFAP1L2Q8N4X5 818 aa15.13■□□□□ 0.01
LDLR-202ENST00000455727 SGF29Q96ES7 293 aa15.13■□□□□ 0.01
LDLR-202ENST00000455727 TTC1Q99614 292 aa15.13■□□□□ 0.01
LDLR-202ENST00000455727 TTPALQ9BTX7 342 aa15.13■□□□□ 0.01
LDLR-202ENST00000455727 TRMOQ9BU70 441 aa15.13■□□□□ 0.01
LDLR-202ENST00000455727 UNKQ9C0B0 810 aaKnown RBP15.13■□□□□ 0.01
LDLR-202ENST00000455727 TRPC7Q9HCX4 862 aa15.13■□□□□ 0.01
LDLR-202ENST00000455727 HMX1Q9NP08 348 aaPredicted RBP15.13■□□□□ 0.01
LDLR-202ENST00000455727 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.13■□□□□ 0.01
LDLR-202ENST00000455727 NEMP2A6NFY4 417 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 SDHDO14521 159 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 MUSKO15146 869 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 ACSL4O60488 711 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 PDE5AO76074 875 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 GLP2RO95838 553 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 SERPINF2P08697 491 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 SP100P23497 879 aaPredicted RBP15.12■□□□□ 0.01
LDLR-202ENST00000455727 GATMP50440 423 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 KCNQ1P51787 676 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 PEX6Q13608 980 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 PDCD2Q16342 344 aaPredicted RBP15.12■□□□□ 0.01
LDLR-202ENST00000455727 HPS6Q86YV9 775 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 NPAS4Q8IUM7 802 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 LGI2Q8N0V4 545 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 CD99L2Q8TCZ2 262 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 ANKRD49Q8WVL7 239 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 OVCA2Q8WZ82 227 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 SEPT8Q92599 483 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 PPP1R36Q96LQ0 422 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 TBATAQ96M53 351 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 SERPINI1Q99574 410 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 POPDC3Q9HBV1 291 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 MARCH4Q9P2E8 410 aaPredicted RBP15.12■□□□□ 0.01
LDLR-202ENST00000455727 STK39Q9UEW8 545 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 A6NHS1 94 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 AIM2O14862 343 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 RPP40O75818 363 aaKnown RBP15.12■□□□□ 0.01
LDLR-202ENST00000455727 BAG2O95816 211 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 GNRH1P01148 92 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 HSPA1AP0DMV8 641 aaKnown RBP15.12■□□□□ 0.01
LDLR-202ENST00000455727 HSPA1BP0DMV9 641 aaKnown RBP15.12■□□□□ 0.01
LDLR-202ENST00000455727 ATF6P18850 670 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 IMPDH1P20839 514 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 KCNA5P22460 613 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 NUDT2P50583 147 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 CDKN2DP55273 166 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 GNA12Q03113 381 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 SULT2A1Q06520 285 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 NXNQ6DKJ4 435 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 MRNIPQ6NTE8 343 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 KLHDC10Q6PID8 442 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 TMEM207Q6UWW9 146 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 CHSY3Q70JA7 882 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 ISCA2Q86U28 154 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 RNF135Q8IUD6 432 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 DSELQ8IZU8 1212 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 PDZD8Q8NEN9 1154 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 GIPC2Q8TF65 315 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 MGME1Q9BQP7 344 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 KCTD3Q9Y597 815 aa15.12■□□□□ 0.01
LDLR-202ENST00000455727 CD3EAPO15446 510 aaKnown RBP15.11■□□□□ 0.01
LDLR-202ENST00000455727 NDST3O95803 873 aa15.11■□□□□ 0.01
LDLR-202ENST00000455727 OGNP20774 298 aaKnown RBP15.11■□□□□ 0.01
LDLR-202ENST00000455727 FDXRP22570 491 aa15.11■□□□□ 0.01
LDLR-202ENST00000455727 HOXD9P28356 352 aaPredicted RBP15.11■□□□□ 0.01
LDLR-202ENST00000455727 SLC11A2P49281 568 aa15.11■□□□□ 0.01
LDLR-202ENST00000455727 SUOXP51687 545 aa15.11■□□□□ 0.01
LDLR-202ENST00000455727 CDH4P55283 916 aa15.11■□□□□ 0.01
LDLR-202ENST00000455727 NFKB2Q00653 900 aa15.11■□□□□ 0.01
LDLR-202ENST00000455727 RFTN1Q14699 578 aaPredicted RBP15.11■□□□□ 0.01
LDLR-202ENST00000455727 KBTBD6Q86V97 674 aa15.11■□□□□ 0.01
LDLR-202ENST00000455727 KBTBD2Q8IY47 623 aa15.11■□□□□ 0.01
LDLR-202ENST00000455727 PELI3Q8N2H9 469 aa15.11■□□□□ 0.01
LDLR-202ENST00000455727 SLC26A7Q8TE54 656 aa15.11■□□□□ 0.01
LDLR-202ENST00000455727 L3HYPDHQ96EM0 354 aa15.11■□□□□ 0.01
LDLR-202ENST00000455727 CATSPER2Q96P56 530 aa15.11■□□□□ 0.01
LDLR-202ENST00000455727 PSKH2Q96QS6 385 aa15.11■□□□□ 0.01
LDLR-202ENST00000455727 TRIB3Q96RU7 358 aa15.11■□□□□ 0.01
LDLR-202ENST00000455727 MEAF6Q9HAF1 191 aa15.11■□□□□ 0.01
LDLR-202ENST00000455727 GTSE1Q9NYZ3 720 aa15.11■□□□□ 0.01
LDLR-202ENST00000455727 SEPT3Q9UH03 358 aa15.11■□□□□ 0.01
LDLR-202ENST00000455727 COPG1Q9Y678 874 aaKnown RBP15.11■□□□□ 0.01
LDLR-202ENST00000455727 TET1Q8NFU7 2136 aa15.11■□□□□ 0.01
LDLR-202ENST00000455727 PITPNM1O00562 1244 aa15.11■□□□□ 0.01
LDLR-202ENST00000455727 BUD23O43709 281 aaKnown RBP15.11■□□□□ 0.01
LDLR-202ENST00000455727 AOC2O75106 756 aa15.11■□□□□ 0.01
LDLR-202ENST00000455727 SORBS2O94875 1100 aaKnown RBP15.11■□□□□ 0.01
LDLR-202ENST00000455727 GOT2P00505 430 aaKnown RBP15.11■□□□□ 0.01
LDLR-202ENST00000455727 INHAP05111 366 aa15.11■□□□□ 0.01
LDLR-202ENST00000455727 HNRNPLP14866 589 aaKnown RBP eCLIP15.11■□□□□ 0.01
LDLR-202ENST00000455727 CDC25CP30307 473 aa15.11■□□□□ 0.01
LDLR-202ENST00000455727 SLC6A4P31645 630 aa15.11■□□□□ 0.01
LDLR-202ENST00000455727 TUFMP49411 452 aaKnown RBP15.11■□□□□ 0.01
LDLR-202ENST00000455727 PPM1LQ5SGD2 360 aa15.11■□□□□ 0.01
LDLR-202ENST00000455727 TMEM198Q66K66 360 aa15.11■□□□□ 0.01
LDLR-202ENST00000455727 SLC8B1Q6J4K2 584 aa15.11■□□□□ 0.01
LDLR-202ENST00000455727 TAS1R1Q7RTX1 841 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms