RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 OR1G1P47890 313 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 SLC6A9P48067 706 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 LHX1P48742 406 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 MC1RQ01726 317 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 MEF2AQ02078 507 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 GALNT2Q10471 571 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 PTP4A2Q12974 167 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 CTBP1Q13363 440 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 STILQ15468 1287 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 GAB4Q2WGN9 574 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 TTC31Q49AM3 519 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 DNTTIP2Q5QJE6 756 aaKnown RBP5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 EMC10Q5UCC4 262 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 NAA35Q5VZE5 725 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 ARHGAP17Q68EM7 881 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 GPR139Q6DWJ6 353 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 PPP1R2P3Q6NXS1 205 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 RPUSD3Q6P087 351 aaKnown RBP5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 KLHL24Q6TFL4 600 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 CCDC91Q7Z6B0 441 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 DNAJB7Q7Z6W7 309 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 FAM90A1Q86YD7 464 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 PHF13Q86YI8 300 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 MCOLN2Q8IZK6 566 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 TAGAPQ8N103 731 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 SLC35F6Q8N357 371 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 TMEM151AQ8N4L1 468 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 FBXL6Q8N531 539 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 TMEM35BQ8NCS4 154 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 OR1N1Q8NGS0 311 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 KIF18AQ8NI77 898 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 SPATA18Q8TC71 538 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 TOP1MTQ969P6 601 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 C3orf49Q96BT1 292 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 ARHGEF26Q96DR7 871 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 VCPIP1Q96JH7 1222 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 NOX5Q96PH1 765 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 RBM15Q96T37 977 aaKnown RBP eCLIP5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 RTP3Q9BQQ7 232 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 DNAI2Q9GZS0 605 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 THAP2Q9H0W7 228 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 PCDHAC1Q9H158 963 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 DPEP3Q9H4B8 488 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 PRDM13Q9H4Q3 707 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 CHODLQ9H9P2 273 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 IL23AQ9NPF7 189 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 CCDC177Q9NQR7 707 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 KCMF1Q9P0J7 381 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 ADAM22Q9P0K1 906 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 DNAJB4Q9UDY4 337 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 DNAI1Q9UI46 699 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 CYTH4Q9UIA0 394 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 MID2Q9UJV3 735 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 PTPRSQ13332 1948 aa5.33□□□□□ -1.56
HMGB1P4-201ENST00000455362 NCANO14594 1321 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 TCRBV5S2A0A599 114 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 ARHGEF37A1IGU5 675 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 GRID2IPA4D2P6 1211 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 CTAGE9A4FU28 777 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 FAM170BA6NMN3 283 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 NT5C1B-RDH14C9J2C7 533 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 F2RL2O00254 374 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 DNPH1O43598 174 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 TRAPPC3O43617 180 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 BUB1O43683 1085 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 SEC24DO94855 1032 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 OAZ2O95190 189 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 GLP2RO95838 553 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 FGBP02675 491 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 AMHP03971 560 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 GALTP07902 379 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 MYBL1P10243 752 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 ODC1P11926 461 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 EGR1P18146 543 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 TYMPP19971 482 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 IL11P20809 199 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 ACAT1P24752 427 aaKnown RBP5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 APEX1P27695 318 aaKnown RBP5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 PCSK1P29120 753 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 ADMP35318 185 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 PAFAH1B1P43034 410 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 SLC11A1P49279 550 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 AFF3P51826 1226 aaKnown RBP5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 HADHBP55084 474 aaKnown RBP5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 OXCT1P55809 520 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 WDR5P61964 334 aaKnown RBP5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 DEFB103AP81534 67 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 CREB5Q02930 508 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 FPGSQ05932 587 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 NFATC3Q12968 1075 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 MPP3Q13368 585 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 PPIGQ13427 754 aaKnown RBP eCLIP5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 BAK1Q16611 211 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 NKPD1Q17RQ9 610 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 C2CD6Q53TS8 623 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 DNAJC21Q5F1R6 531 aaKnown RBP5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 TMTC4Q5T4D3 741 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 LIN9Q5TKA1 542 aa5.32□□□□□ -1.56
HMGB1P4-201ENST00000455362 SLC22A25Q6T423 547 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms