RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 WASH4PA8MWX3 477 aa8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 EIF3CLB5ME19 914 aaKnown RBP8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 RASA4BC9J798 803 aa8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 RASA4O43374 803 aa8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 NUDT21O43809 227 aaKnown RBP8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 HOXC4P09017 264 aaPredicted RBP8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 GPD1P21695 349 aa8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 SERPINA4P29622 427 aa8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 CSNK1DP48730 415 aa8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 HDAC4P56524 1084 aa8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 KIAA1024LP59773 190 aa8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 CCL7P80098 99 aa8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 SERINC3Q13530 473 aa8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 ARHGEF7Q14155 803 aa8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 INPP5AQ14642 412 aa8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 C15orf59Q2T9L4 293 aaPredicted RBP8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 WSCD2Q2TBF2 565 aa8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 C2CD6Q53TS8 623 aa8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 MANEAQ5SRI9 462 aa8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 FKBP15Q5T1M5 1219 aa8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 CERCAMQ5T4B2 595 aa8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 DPY19L2P1Q6NXN4 242 aa8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 PPP1R2P3Q6NXS1 205 aa8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 ATG14Q6ZNE5 492 aa8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 RD3Q7Z3Z2 195 aa8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 TAF8Q7Z7C8 310 aa8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 UMODL1-AS1Q8N2C9 162 aa8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 PAF1Q8N7H5 531 aa8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 C3orf20Q8ND61 904 aa8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 GPR156Q8NFN8 814 aa8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 GPT2Q8TD30 523 aa8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 TSACCQ96A04 125 aaPredicted RBP8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 EIF3CQ99613 913 aaKnown RBP8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 SEMA3CQ99985 751 aa8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 C11orf70Q9BRQ4 267 aa8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 SUV39H2Q9H5I1 410 aa8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 ATP13A3Q9H7F0 1226 aa8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 CAAP1Q9H8G2 361 aa8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 PCDH12Q9NPG4 1184 aa8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 ADAM22Q9P0K1 906 aa8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 PISDQ9UG56 409 aa8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 NOCTQ9UK39 431 aaKnown RBP8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 NEU3Q9UQ49 428 aa8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 ATP8A1Q9Y2Q0 1164 aa8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 LOXL2Q9Y4K0 774 aa8.08□□□□□ -1.12
NIF3L1-209ENST00000454952 ATMQ13315 3056 aa8.07□□□□□ -1.12
NIF3L1-209ENST00000454952 PIEZO2Q9H5I5 2752 aa8.07□□□□□ -1.12
NIF3L1-209ENST00000454952 A0A1W2PQ67 120 aa8.07□□□□□ -1.12
NIF3L1-209ENST00000454952 ARHGAP42A6NI28 874 aa8.07□□□□□ -1.12
NIF3L1-209ENST00000454952 SIGLEC16A6NMB1 481 aa8.07□□□□□ -1.12
NIF3L1-209ENST00000454952 FAM72CH0Y354 149 aa8.07□□□□□ -1.12
NIF3L1-209ENST00000454952 ARHGAP6O43182 974 aa8.07□□□□□ -1.12
NIF3L1-209ENST00000454952 EFSO43281 561 aa8.07□□□□□ -1.12
NIF3L1-209ENST00000454952 GFPT2O94808 682 aa8.07□□□□□ -1.12
NIF3L1-209ENST00000454952 PCCBP05166 539 aa8.07□□□□□ -1.12
NIF3L1-209ENST00000454952 SOX5P35711 763 aa8.07□□□□□ -1.12
NIF3L1-209ENST00000454952 MMP12P39900 470 aa8.07□□□□□ -1.12
NIF3L1-209ENST00000454952 STAT1P42224 750 aa8.07□□□□□ -1.12
NIF3L1-209ENST00000454952 LIG3P49916 1009 aa8.07□□□□□ -1.12
NIF3L1-209ENST00000454952 ATP1A2P50993 1020 aa8.07□□□□□ -1.12
NIF3L1-209ENST00000454952 ZNF143P52747 638 aaPredicted RBP8.07□□□□□ -1.12
NIF3L1-209ENST00000454952 NDST2P52849 883 aa8.07□□□□□ -1.12
NIF3L1-209ENST00000454952 FMO1Q01740 532 aa8.07□□□□□ -1.12
NIF3L1-209ENST00000454952 ZFP36L1Q07352 338 aaKnown RBP8.07□□□□□ -1.12
NIF3L1-209ENST00000454952 NFATC3Q12968 1075 aa8.07□□□□□ -1.12
NIF3L1-209ENST00000454952 RFTN1Q14699 578 aaPredicted RBP8.07□□□□□ -1.12
NIF3L1-209ENST00000454952 C14orf28Q4W4Y0 310 aa8.07□□□□□ -1.12
NIF3L1-209ENST00000454952 TCP11X2Q5H9J9 407 aa8.07□□□□□ -1.12
NIF3L1-209ENST00000454952 LRRC73Q5JTD7 316 aa8.07□□□□□ -1.12
NIF3L1-209ENST00000454952 FAM72AQ5TYM5 149 aa8.07□□□□□ -1.12
NIF3L1-209ENST00000454952 FAM72DQ6L9T8 149 aa8.07□□□□□ -1.12
NIF3L1-209ENST00000454952 OGFOD3Q6PK18 319 aa8.07□□□□□ -1.12
NIF3L1-209ENST00000454952 LEKR1Q6ZMV7 388 aa8.07□□□□□ -1.12
NIF3L1-209ENST00000454952 B3GNT8Q7Z7M8 397 aa8.07□□□□□ -1.12
NIF3L1-209ENST00000454952 FAM72BQ86X60 149 aa8.07□□□□□ -1.12
NIF3L1-209ENST00000454952 PHF13Q86YI8 300 aaPredicted RBP8.07□□□□□ -1.12
NIF3L1-209ENST00000454952 CCDC185Q8N715 623 aa8.07□□□□□ -1.12
NIF3L1-209ENST00000454952 CCDC112Q8NEF3 446 aa8.07□□□□□ -1.12
NIF3L1-209ENST00000454952 FAM46DQ8NEK8 389 aa8.07□□□□□ -1.12
NIF3L1-209ENST00000454952 OR56A4Q8NGH8 313 aa8.07□□□□□ -1.12
NIF3L1-209ENST00000454952 FOXP3Q9BZS1 431 aa8.07□□□□□ -1.12
NIF3L1-209ENST00000454952 STARD5Q9NSY2 213 aa8.07□□□□□ -1.12
NIF3L1-209ENST00000454952 LHX3Q9UBR4 397 aa8.07□□□□□ -1.12
NIF3L1-209ENST00000454952 PNMA8BQ9ULN7 279 aaPredicted RBP8.07□□□□□ -1.12
NIF3L1-209ENST00000454952 OR1A2Q9Y585 309 aa8.07□□□□□ -1.12
NIF3L1-209ENST00000454952 NAV2Q8IVL1 2488 aa8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 A0A1W2PQM1 296 aa8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 PMS2P1A4D2B8 440 aa8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 HGSO14964 777 aaPredicted RBP8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 CREB3O43889 395 aa8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 NOBOXO60393 691 aa8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 PRAMEF11O60813 436 aa8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 PPFIA2O75334 1257 aa8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 PIGNO95427 931 aa8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 CPNE6O95741 557 aa8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 CELA2BP08218 269 aaPredicted RBP8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 ELFN1P0C7U0 828 aa8.06□□□□□ -1.12
NIF3L1-209ENST00000454952 CCDC172P0C7W6 258 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms