RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 TTC31Q49AM3 519 aaPredicted RBP11.3□□□□□ -0.6
TRAF4-206ENST00000454852 TMEM52BQ4KMG9 183 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 DNAJC21Q5F1R6 531 aaKnown RBP11.3□□□□□ -0.6
TRAF4-206ENST00000454852 PCID2Q5JVF3 399 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 FNBP1LQ5T0N5 605 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 SYCP2LQ5T4T6 812 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 CFAP58Q5T655 872 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 AGBL4Q5VU57 503 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 USP45Q70EL2 814 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 CENPUQ71F23 418 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 DPPA4Q7L190 304 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 NLRP9Q7RTR0 991 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 AGGF1Q8N302 714 aaeCLIP11.3□□□□□ -0.6
TRAF4-206ENST00000454852 AADATQ8N5Z0 425 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 DNAAF3Q8N9W5 541 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 PDCD6IPQ8WUM4 868 aaKnown RBP11.3□□□□□ -0.6
TRAF4-206ENST00000454852 IFT81Q8WYA0 676 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 RMDN1Q96DB5 314 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 SIPA1Q96FS4 1042 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 HINFPQ9BQA5 517 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 APOL2Q9BQE5 337 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 KIFC1Q9BW19 673 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 KDM4CQ9H3R0 1056 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 ITM2CQ9NQX7 267 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 DYRK4Q9NR20 520 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 C2orf42Q9NWW7 574 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 USP36Q9P275 1121 aaKnown RBP11.3□□□□□ -0.6
TRAF4-206ENST00000454852 NFU1Q9UMS0 254 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 TEX264Q9Y6I9 313 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 ATG2BQ96BY7 2078 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 VCANP13611 3396 aa11.3□□□□□ -0.6
TRAF4-206ENST00000454852 TTC28Q96AY4 2481 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 TRIOO75962 3097 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 FAM237BA0A1B0GVD1 139 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 HEATR9A2RTY3 570 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 MROH6A6NGR9 719 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 GOLGA8MH3BSY2 632 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 K7ESF4 209 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 PSMD11O00231 422 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 MID1O15344 667 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 LDB2O43679 373 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 PI15O43692 258 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 APBB3O95704 486 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 MYBL2P10244 700 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 TSHRP16473 764 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 HNF1BP35680 557 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 HMGCLP35914 325 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 MMP12P39900 470 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 P2RY2P41231 377 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 ABL2P42684 1182 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 CXCL12P48061 93 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 METAP1P53582 386 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 EPHB1P54762 984 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 PDE1BQ01064 536 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 ACVR1Q04771 509 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 RALGDSQ12967 914 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 FRG1Q14331 258 aaKnown RBP11.29□□□□□ -0.6
TRAF4-206ENST00000454852 HLTFQ14527 1009 aaKnown RBP eCLIP11.29□□□□□ -0.6
TRAF4-206ENST00000454852 NAA30Q147X3 362 aaPredicted RBP11.29□□□□□ -0.6
TRAF4-206ENST00000454852 SLMAPQ14BN4 828 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 TAF1AQ15573 450 aaPredicted RBP11.29□□□□□ -0.6
TRAF4-206ENST00000454852 ELF2Q15723 593 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 MSS51Q4VC12 460 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 ERAP2Q6P179 960 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 NEK5Q6P3R8 708 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 EMBQ6PCB8 327 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 TTC7BQ86TV6 843 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 TMEM135Q86UB9 458 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 TTC30BQ8N4P2 665 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 SLC25A41Q8N5S1 370 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 FLCNQ8NFG4 579 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 TSTD1Q8NFU3 115 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 DTX3LQ8TDB6 740 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 AENQ8WTP8 325 aaKnown RBP11.29□□□□□ -0.6
TRAF4-206ENST00000454852 EBNA1BP2Q99848 306 aaKnown RBP11.29□□□□□ -0.6
TRAF4-206ENST00000454852 WDR83Q9BRX9 315 aaKnown RBP11.29□□□□□ -0.6
TRAF4-206ENST00000454852 TXLNGYQ9BZA5 131 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 PCDH12Q9NPG4 1184 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 PRMT8Q9NR22 394 aaPredicted RBP11.29□□□□□ -0.6
TRAF4-206ENST00000454852 NFKBIL1Q9UBC1 381 aaPredicted RBP11.29□□□□□ -0.6
TRAF4-206ENST00000454852 SOX13Q9UN79 622 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 SPO11Q9Y5K1 396 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 FADS3Q9Y5Q0 445 aa11.29□□□□□ -0.6
TRAF4-206ENST00000454852 CCDC151A5D8V7 595 aa11.28□□□□□ -0.6
TRAF4-206ENST00000454852 RGSL1A5PLK6 1076 aa11.28□□□□□ -0.6
TRAF4-206ENST00000454852 NPIPB15A6NHN6 443 aaPredicted RBP11.28□□□□□ -0.6
TRAF4-206ENST00000454852 STK25O00506 426 aa11.28□□□□□ -0.6
TRAF4-206ENST00000454852 TSPAN6O43657 245 aa11.28□□□□□ -0.6
TRAF4-206ENST00000454852 PLRG1O43660 514 aaKnown RBP11.28□□□□□ -0.6
TRAF4-206ENST00000454852 ZNF217O75362 1048 aa11.28□□□□□ -0.6
TRAF4-206ENST00000454852 AVILO75366 819 aa11.28□□□□□ -0.6
TRAF4-206ENST00000454852 CRTAMO95727 393 aa11.28□□□□□ -0.6
TRAF4-206ENST00000454852 TTC4O95801 387 aa11.28□□□□□ -0.6
TRAF4-206ENST00000454852 DCNP07585 359 aaKnown RBP11.28□□□□□ -0.6
TRAF4-206ENST00000454852 TDGF1P13385 188 aa11.28□□□□□ -0.6
TRAF4-206ENST00000454852 LHCGRP22888 699 aa11.28□□□□□ -0.6
TRAF4-206ENST00000454852 MGAT1P26572 445 aa11.28□□□□□ -0.6
TRAF4-206ENST00000454852 VIPR1P32241 457 aa11.28□□□□□ -0.6
TRAF4-206ENST00000454852 PTPN5P54829 565 aa11.28□□□□□ -0.6
TRAF4-206ENST00000454852 SESN2P58004 480 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms