RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 SHROOM1Q2M3G4 852 aaPredicted RBP12.09□□□□□ -0.47
SEC16A-207ENST00000453963 ACSBG2Q5FVE4 666 aa12.09□□□□□ -0.47
SEC16A-207ENST00000453963 FLCNQ8NFG4 579 aa12.09□□□□□ -0.47
SEC16A-207ENST00000453963 MYLPFQ96A32 169 aa12.09□□□□□ -0.47
SEC16A-207ENST00000453963 PPP1R14BQ96C90 147 aa12.09□□□□□ -0.47
SEC16A-207ENST00000453963 ZNF624Q9P2J8 865 aaPredicted RBP12.09□□□□□ -0.47
SEC16A-207ENST00000453963 VWA7Q9Y334 891 aa12.09□□□□□ -0.47
SEC16A-207ENST00000453963 CAMTA1Q9Y6Y1 1673 aa12.09□□□□□ -0.47
SEC16A-207ENST00000453963 IGSF6O95976 241 aa12.09□□□□□ -0.47
SEC16A-207ENST00000453963 SNHG28P0DPA3 235 aa12.09□□□□□ -0.47
SEC16A-207ENST00000453963 CKBP12277 381 aa12.09□□□□□ -0.47
SEC16A-207ENST00000453963 ITGA2P17301 1181 aa12.09□□□□□ -0.47
SEC16A-207ENST00000453963 TNFSF9P41273 254 aa12.09□□□□□ -0.47
SEC16A-207ENST00000453963 CCT3P49368 545 aaKnown RBP12.09□□□□□ -0.47
SEC16A-207ENST00000453963 EGFLAMQ63HQ2 1017 aa12.09□□□□□ -0.47
SEC16A-207ENST00000453963 LLGL2Q6P1M3 1020 aa12.09□□□□□ -0.47
SEC16A-207ENST00000453963 EIF3MQ7L2H7 374 aaKnown RBP12.09□□□□□ -0.47
SEC16A-207ENST00000453963 STRADAQ7RTN6 431 aa12.09□□□□□ -0.47
SEC16A-207ENST00000453963 KIAA0319LQ8IZA0 1049 aa12.09□□□□□ -0.47
SEC16A-207ENST00000453963 CACTIN-AS1Q8N1I8 211 aa12.09□□□□□ -0.47
SEC16A-207ENST00000453963 SLC4A11Q8NBS3 891 aa12.09□□□□□ -0.47
SEC16A-207ENST00000453963 C10orf82Q8WW14 230 aa12.09□□□□□ -0.47
SEC16A-207ENST00000453963 LPGAT1Q92604 370 aa12.09□□□□□ -0.47
SEC16A-207ENST00000453963 REXO5Q96IC2 774 aaKnown RBP12.09□□□□□ -0.47
SEC16A-207ENST00000453963 ERGIC3Q9Y282 383 aa12.09□□□□□ -0.47
SEC16A-207ENST00000453963 BTRCQ9Y297 605 aa12.09□□□□□ -0.47
SEC16A-207ENST00000453963 A0A0J9YYE9 177 aa12.09□□□□□ -0.47
SEC16A-207ENST00000453963 FOXO6A8MYZ6 492 aa12.09□□□□□ -0.47
SEC16A-207ENST00000453963 FAM47E-STBD1D6RA91 191 aa12.09□□□□□ -0.47
SEC16A-207ENST00000453963 SLC28A1O00337 649 aa12.09□□□□□ -0.47
SEC16A-207ENST00000453963 LRCH4O75427 683 aa12.09□□□□□ -0.47
SEC16A-207ENST00000453963 SLC22A3O75751 556 aa12.09□□□□□ -0.47
SEC16A-207ENST00000453963 WARSP23381 471 aaKnown RBP12.09□□□□□ -0.47
SEC16A-207ENST00000453963 FOXN2P32314 431 aa12.09□□□□□ -0.47
SEC16A-207ENST00000453963 TTPAP49638 278 aa12.09□□□□□ -0.47
SEC16A-207ENST00000453963 RPS6KA3P51812 740 aa12.09□□□□□ -0.47
SEC16A-207ENST00000453963 BOP1Q14137 746 aaKnown RBP12.09□□□□□ -0.47
SEC16A-207ENST00000453963 QPRTQ15274 297 aa12.09□□□□□ -0.47
SEC16A-207ENST00000453963 C6orf52Q5T4I8 152 aa12.09□□□□□ -0.47
SEC16A-207ENST00000453963 ATG14Q6ZNE5 492 aa12.09□□□□□ -0.47
SEC16A-207ENST00000453963 GK5Q6ZS86 529 aa12.09□□□□□ -0.47
SEC16A-207ENST00000453963 VN1R5Q7Z5H4 357 aa12.09□□□□□ -0.47
SEC16A-207ENST00000453963 HIPK1Q86Z02 1210 aa12.09□□□□□ -0.47
SEC16A-207ENST00000453963 ZNF513Q8N8E2 541 aaPredicted RBP12.09□□□□□ -0.47
SEC16A-207ENST00000453963 TRPM4Q8TD43 1214 aa12.09□□□□□ -0.47
SEC16A-207ENST00000453963 LENG8Q96PV6 779 aaPredicted RBP12.09□□□□□ -0.47
SEC16A-207ENST00000453963 TRIM8Q9BZR9 551 aa12.09□□□□□ -0.47
SEC16A-207ENST00000453963 UNC93B1Q9H1C4 597 aa12.09□□□□□ -0.47
SEC16A-207ENST00000453963 SPTLC1O15269 473 aa12.08□□□□□ -0.47
SEC16A-207ENST00000453963 PLIN3O60664 434 aa12.08□□□□□ -0.47
SEC16A-207ENST00000453963 FAM155BO75949 473 aa12.08□□□□□ -0.47
SEC16A-207ENST00000453963 CD86P42081 329 aa12.08□□□□□ -0.47
SEC16A-207ENST00000453963 ACTR3P61158 418 aa12.08□□□□□ -0.47
SEC16A-207ENST00000453963 PLD1Q13393 1074 aa12.08□□□□□ -0.47
SEC16A-207ENST00000453963 TATDN1Q6P1N9 297 aa12.08□□□□□ -0.47
SEC16A-207ENST00000453963 AFTPHQ6ULP2 937 aa12.08□□□□□ -0.47
SEC16A-207ENST00000453963 SLCO6A1Q86UG4 719 aa12.08□□□□□ -0.47
SEC16A-207ENST00000453963 IL31RAQ8NI17 732 aa12.08□□□□□ -0.47
SEC16A-207ENST00000453963 MCFD2Q8NI22 146 aa12.08□□□□□ -0.47
SEC16A-207ENST00000453963 ATP6V1HQ9UI12 483 aa12.08□□□□□ -0.47
SEC16A-207ENST00000453963 WASF2Q9Y6W5 498 aa12.08□□□□□ -0.47
SEC16A-207ENST00000453963 OTCP00480 354 aa12.08□□□□□ -0.48
SEC16A-207ENST00000453963 TYMPP19971 482 aa12.08□□□□□ -0.48
SEC16A-207ENST00000453963 GRK4P32298 578 aa12.08□□□□□ -0.48
SEC16A-207ENST00000453963 SLC18A1P54219 525 aa12.08□□□□□ -0.48
SEC16A-207ENST00000453963 THAP5Q7Z6K1 395 aa12.08□□□□□ -0.48
SEC16A-207ENST00000453963 ADAMTSL2Q86TH1 951 aa12.08□□□□□ -0.48
SEC16A-207ENST00000453963 AKAP14Q86UN6 197 aa12.08□□□□□ -0.48
SEC16A-207ENST00000453963 CDYL2Q8N8U2 506 aa12.08□□□□□ -0.48
SEC16A-207ENST00000453963 MED8Q96G25 268 aa12.08□□□□□ -0.48
SEC16A-207ENST00000453963 SERAC1Q96JX3 654 aa12.08□□□□□ -0.48
SEC16A-207ENST00000453963 CORO2BQ9UQ03 480 aa12.08□□□□□ -0.48
SEC16A-207ENST00000453963 PAPSS1O43252 624 aaPredicted RBP12.08□□□□□ -0.48
SEC16A-207ENST00000453963 FYNP06241 537 aa12.08□□□□□ -0.48
SEC16A-207ENST00000453963 ZNF37AP17032 561 aaPredicted RBP12.08□□□□□ -0.48
SEC16A-207ENST00000453963 TSPAN8P19075 237 aa12.08□□□□□ -0.48
SEC16A-207ENST00000453963 KLRC2P26717 231 aa12.08□□□□□ -0.48
SEC16A-207ENST00000453963 GSTM5P46439 218 aa12.08□□□□□ -0.48
SEC16A-207ENST00000453963 POLR2LP62875 67 aaKnown RBP12.08□□□□□ -0.48
SEC16A-207ENST00000453963 STX4Q12846 297 aa12.08□□□□□ -0.48
SEC16A-207ENST00000453963 ARMC12Q5T9G4 340 aa12.08□□□□□ -0.48
SEC16A-207ENST00000453963 MOB2Q70IA6 237 aa12.08□□□□□ -0.48
SEC16A-207ENST00000453963 SPATA19Q7Z5L4 167 aa12.08□□□□□ -0.48
SEC16A-207ENST00000453963 ZBTB46Q86UZ6 589 aa12.08□□□□□ -0.48
SEC16A-207ENST00000453963 LGI2Q8N0V4 545 aa12.08□□□□□ -0.48
SEC16A-207ENST00000453963 PLD5Q8N7P1 536 aa12.08□□□□□ -0.48
SEC16A-207ENST00000453963 ZNF317Q96PQ6 595 aaPredicted RBP12.08□□□□□ -0.48
SEC16A-207ENST00000453963 CAB39LQ9H9S4 337 aa12.08□□□□□ -0.48
SEC16A-207ENST00000453963 POLE3Q9NRF9 147 aa12.08□□□□□ -0.48
SEC16A-207ENST00000453963 PGK1P00558 417 aa12.08□□□□□ -0.48
SEC16A-207ENST00000453963 RPN2P04844 631 aa12.08□□□□□ -0.48
SEC16A-207ENST00000453963 UMPSP11172 480 aa12.08□□□□□ -0.48
SEC16A-207ENST00000453963 ZNF12P17014 697 aa12.08□□□□□ -0.48
SEC16A-207ENST00000453963 OLR1P78380 273 aa12.08□□□□□ -0.48
SEC16A-207ENST00000453963 IRF8Q02556 426 aa12.08□□□□□ -0.48
SEC16A-207ENST00000453963 BCL2L1Q07817 233 aa12.08□□□□□ -0.48
SEC16A-207ENST00000453963 MAP2K5Q13163 448 aa12.08□□□□□ -0.48
SEC16A-207ENST00000453963 SLCO2A1Q92959 643 aa12.08□□□□□ -0.48
SEC16A-207ENST00000453963 IKZF4Q9H2S9 585 aa12.08□□□□□ -0.48
SEC16A-207ENST00000453963 C12orf65Q9H3J6 166 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms