RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 WDR24Q96S15 920 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 TUBB2BQ9BVA1 445 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 ADGRE3Q9BY15 652 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 SLC6A17Q9H1V8 727 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 GBA3Q9H227 469 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 NOD2Q9HC29 1040 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 GLOD4Q9HC38 313 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 RAB6BQ9NRW1 208 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 KCTD5Q9NXV2 234 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 SEPT10Q9P0V9 454 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 SARDHQ9UL12 918 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 PHTF1Q9UMS5 762 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 ZNF148Q9UQR1 794 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 AAR2Q9Y312 384 aaKnown RBP8.78□□□□□ -1
COL28A1-205ENST00000453441 PCDHGA5Q9Y5G8 931 aa8.78□□□□□ -1
COL28A1-205ENST00000453441 TCRBV7S2A1N4TA0A589 114 aa8.77□□□□□ -1.01
COL28A1-205ENST00000453441 ERI2A8K979 691 aaKnown RBP8.77□□□□□ -1.01
COL28A1-205ENST00000453441 PROB1E7EW31 1015 aa8.77□□□□□ -1.01
COL28A1-205ENST00000453441 CCDC188H7C350 402 aa8.77□□□□□ -1.01
COL28A1-205ENST00000453441 TRAFD1O14545 582 aaPredicted RBP8.77□□□□□ -1.01
COL28A1-205ENST00000453441 PSMD3O43242 534 aa8.77□□□□□ -1.01
COL28A1-205ENST00000453441 FOXD2O60548 495 aaPredicted RBP8.77□□□□□ -1.01
COL28A1-205ENST00000453441 PGLSO95336 258 aa8.77□□□□□ -1.01
COL28A1-205ENST00000453441 CPP00450 1065 aa8.77□□□□□ -1.01
COL28A1-205ENST00000453441 CYP2A6P11509 494 aaPredicted RBP8.77□□□□□ -1.01
COL28A1-205ENST00000453441 GRIA4P48058 902 aa8.77□□□□□ -1.01
COL28A1-205ENST00000453441 FNTAP49354 379 aa8.77□□□□□ -1.01
COL28A1-205ENST00000453441 GEMP55040 296 aa8.77□□□□□ -1.01
COL28A1-205ENST00000453441 MAXP61244 160 aa8.77□□□□□ -1.01
COL28A1-205ENST00000453441 RPS21P63220 83 aaKnown RBP8.77□□□□□ -1.01
COL28A1-205ENST00000453441 DSC2Q02487 901 aa8.77□□□□□ -1.01
COL28A1-205ENST00000453441 RPL6Q02878 288 aaKnown RBP8.77□□□□□ -1.01
COL28A1-205ENST00000453441 MPP3Q13368 585 aa8.77□□□□□ -1.01
COL28A1-205ENST00000453441 SIX1Q15475 284 aaPredicted RBP8.77□□□□□ -1.01
COL28A1-205ENST00000453441 CYP1B1Q16678 543 aa8.77□□□□□ -1.01
COL28A1-205ENST00000453441 UGP2Q16851 508 aa8.77□□□□□ -1.01
COL28A1-205ENST00000453441 PARP6Q2NL67 630 aa8.77□□□□□ -1.01
COL28A1-205ENST00000453441 PLK5Q496M5 336 aa8.77□□□□□ -1.01
COL28A1-205ENST00000453441 KIAA0895LQ68EN5 471 aa8.77□□□□□ -1.01
COL28A1-205ENST00000453441 LAIR1Q6GTX8 287 aa8.77□□□□□ -1.01
COL28A1-205ENST00000453441 CCDC70Q6NSX1 233 aa8.77□□□□□ -1.01
COL28A1-205ENST00000453441 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.77□□□□□ -1.01
COL28A1-205ENST00000453441 ARHGEF18Q6ZSZ5 1173 aa8.77□□□□□ -1.01
COL28A1-205ENST00000453441 USP45Q70EL2 814 aa8.77□□□□□ -1.01
COL28A1-205ENST00000453441 PARS2Q7L3T8 475 aaKnown RBP8.77□□□□□ -1.01
COL28A1-205ENST00000453441 TRIM69Q86WT6 500 aa8.77□□□□□ -1.01
COL28A1-205ENST00000453441 CACUL1Q86Y37 369 aa8.77□□□□□ -1.01
COL28A1-205ENST00000453441 CAMK1DQ8IU85 385 aa8.77□□□□□ -1.01
COL28A1-205ENST00000453441 ZNF567Q8N184 647 aa8.77□□□□□ -1.01
COL28A1-205ENST00000453441 CCDC89Q8N998 374 aa8.77□□□□□ -1.01
COL28A1-205ENST00000453441 OR14C36Q8NHC7 312 aa8.77□□□□□ -1.01
COL28A1-205ENST00000453441 CCHCR1Q8TD31 782 aa8.77□□□□□ -1.01
COL28A1-205ENST00000453441 GRK7Q8WTQ7 553 aa8.77□□□□□ -1.01
COL28A1-205ENST00000453441 ASB12Q8WXK4 309 aa8.77□□□□□ -1.01
COL28A1-205ENST00000453441 ARRDC3Q96B67 414 aa8.77□□□□□ -1.01
COL28A1-205ENST00000453441 TADA1Q96BN2 335 aa8.77□□□□□ -1.01
COL28A1-205ENST00000453441 ZNF419Q96HQ0 510 aaPredicted RBP8.77□□□□□ -1.01
COL28A1-205ENST00000453441 FEM1CQ96JP0 617 aa8.77□□□□□ -1.01
COL28A1-205ENST00000453441 TDRD1Q9BXT4 1180 aaKnown RBP8.77□□□□□ -1.01
COL28A1-205ENST00000453441 NEUROG2Q9H2A3 272 aa8.77□□□□□ -1.01
COL28A1-205ENST00000453441 USP29Q9HBJ7 922 aa8.77□□□□□ -1.01
COL28A1-205ENST00000453441 SUSD2Q9UGT4 822 aa8.77□□□□□ -1.01
COL28A1-205ENST00000453441 FAM153AQ9UHL3 310 aa8.77□□□□□ -1.01
COL28A1-205ENST00000453441 RSPH14Q9UHP6 348 aa8.77□□□□□ -1.01
COL28A1-205ENST00000453441 DMTF1Q9Y222 760 aa8.77□□□□□ -1.01
COL28A1-205ENST00000453441 R3HDM2Q9Y2K5 976 aaKnown RBP8.77□□□□□ -1.01
COL28A1-205ENST00000453441 RAI2Q9Y5P3 530 aa8.77□□□□□ -1.01
COL28A1-205ENST00000453441 THADAQ6YHU6 1953 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 METTL12A8MUP2 240 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 MEI4A8MW99 385 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 PRR5-ARHGAP8B1AHC4 643 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 C10orf142B7Z368 130 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 PSMD11O00231 422 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 NEMP1O14524 444 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 AREL1O15033 823 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 FZD6O60353 706 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 RNGTTO60942 597 aaKnown RBP8.76□□□□□ -1.01
COL28A1-205ENST00000453441 PHF2O75151 1096 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 PIGNO95427 931 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 GAS8O95995 478 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 NFKB1P19838 968 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 FDFT1P37268 417 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 CD86P42081 329 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 EPHB1P54762 984 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 CKAP4Q07065 602 aaKnown RBP8.76□□□□□ -1.01
COL28A1-205ENST00000453441 NIPAL4Q0D2K0 466 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 POU4F2Q12837 409 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 TRAF2Q12933 501 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 TMEM52BQ4KMG9 183 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 SETMARQ53H47 684 aaPredicted RBP8.76□□□□□ -1.01
COL28A1-205ENST00000453441 ANKRD20A2Q5SQ80 823 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 ANKRD20A1Q5TYW2 823 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 ANKRD20A3Q5VUR7 823 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 LYSMD4Q5XG99 296 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 SYT10Q6XYQ8 523 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 TTC7BQ86TV6 843 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 PRPF39Q86UA1 669 aaKnown RBP8.76□□□□□ -1.01
COL28A1-205ENST00000453441 FAM124AQ86V42 546 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 HORMAD1Q86X24 394 aa8.76□□□□□ -1.01
COL28A1-205ENST00000453441 KLHDC8BQ8IXV7 354 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms