RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 FAM26EQ8N5C1 309 aa12.59□□□□□ -0.39
SSR4-205ENST00000447375 AADATQ8N5Z0 425 aa12.59□□□□□ -0.39
SSR4-205ENST00000447375 CHST14Q8NCH0 376 aa12.59□□□□□ -0.39
SSR4-205ENST00000447375 IFI44Q8TCB0 444 aa12.59□□□□□ -0.39
SSR4-205ENST00000447375 FAM131CQ96AQ9 280 aa12.59□□□□□ -0.39
SSR4-205ENST00000447375 SLC25A18Q9H1K4 315 aa12.59□□□□□ -0.39
SSR4-205ENST00000447375 PDFQ9HBH1 243 aa12.59□□□□□ -0.39
SSR4-205ENST00000447375 USP29Q9HBJ7 922 aa12.59□□□□□ -0.39
SSR4-205ENST00000447375 ETNK2Q9NVF9 386 aa12.59□□□□□ -0.39
SSR4-205ENST00000447375 FCF1Q9Y324 198 aaKnown RBP12.59□□□□□ -0.39
SSR4-205ENST00000447375 CHD5Q8TDI0 1954 aa12.58□□□□□ -0.4
SSR4-205ENST00000447375 BLACEA4D250 179 aa12.58□□□□□ -0.4
SSR4-205ENST00000447375 BTNL10A8MVZ5 291 aa12.58□□□□□ -0.4
SSR4-205ENST00000447375 GOLGA6L6A8MZA4 724 aa12.58□□□□□ -0.4
SSR4-205ENST00000447375 J3KR12 359 aa12.58□□□□□ -0.4
SSR4-205ENST00000447375 BUB1BO60566 1050 aaPredicted RBP12.58□□□□□ -0.4
SSR4-205ENST00000447375 TMCC1O94876 653 aa12.58□□□□□ -0.4
SSR4-205ENST00000447375 PRNPP04156 253 aa12.58□□□□□ -0.4
SSR4-205ENST00000447375 CTSLP07711 333 aa12.58□□□□□ -0.4
SSR4-205ENST00000447375 GIMD1P0DJR0 217 aa12.58□□□□□ -0.4
SSR4-205ENST00000447375 KDELR1P24390 212 aa12.58□□□□□ -0.4
SSR4-205ENST00000447375 MAT2AP31153 395 aaKnown RBP12.58□□□□□ -0.4
SSR4-205ENST00000447375 DRD3P35462 400 aa12.58□□□□□ -0.4
SSR4-205ENST00000447375 MLLT3P42568 568 aaPredicted RBP12.58□□□□□ -0.4
SSR4-205ENST00000447375 METAP1P53582 386 aa12.58□□□□□ -0.4
SSR4-205ENST00000447375 GSDMDP57764 484 aa12.58□□□□□ -0.4
SSR4-205ENST00000447375 MMRN1Q13201 1228 aa12.58□□□□□ -0.4
SSR4-205ENST00000447375 CYTH1Q15438 398 aa12.58□□□□□ -0.4
SSR4-205ENST00000447375 TBR1Q16650 682 aa12.58□□□□□ -0.4
SSR4-205ENST00000447375 HIST2H2BCQ6DN03 193 aa12.58□□□□□ -0.4
SSR4-205ENST00000447375 ZNF354CQ86Y25 554 aa12.58□□□□□ -0.4
SSR4-205ENST00000447375 TP53INP2Q8IXH6 220 aa12.58□□□□□ -0.4
SSR4-205ENST00000447375 WDR36Q8NI36 951 aaKnown RBP12.58□□□□□ -0.4
SSR4-205ENST00000447375 PCDH19Q8TAB3 1148 aa12.58□□□□□ -0.4
SSR4-205ENST00000447375 RAPGEF5Q92565 580 aa12.58□□□□□ -0.4
SSR4-205ENST00000447375 VOPP1Q96AW1 172 aa12.58□□□□□ -0.4
SSR4-205ENST00000447375 FAF2Q96CS3 445 aa12.58□□□□□ -0.4
SSR4-205ENST00000447375 KLHDC7BQ96G42 594 aa12.58□□□□□ -0.4
SSR4-205ENST00000447375 CALR3Q96L12 384 aaKnown RBP12.58□□□□□ -0.4
SSR4-205ENST00000447375 HEPHQ9BQS7 1158 aa12.58□□□□□ -0.4
SSR4-205ENST00000447375 ZNF670Q9BS34 389 aa12.58□□□□□ -0.4
SSR4-205ENST00000447375 LRRC4CQ9HCJ2 640 aa12.58□□□□□ -0.4
SSR4-205ENST00000447375 KLHL11Q9NVR0 708 aa12.58□□□□□ -0.4
SSR4-205ENST00000447375 DMTF1Q9Y222 760 aa12.58□□□□□ -0.4
SSR4-205ENST00000447375 MFHAS1Q9Y4C4 1052 aa12.58□□□□□ -0.4
SSR4-205ENST00000447375 ALG6Q9Y672 507 aa12.58□□□□□ -0.4
SSR4-205ENST00000447375 LY6G6EA0A0G2JKS1 128 aa12.57□□□□□ -0.4
SSR4-205ENST00000447375 ZNF487B1APH4 448 aa12.57□□□□□ -0.4
SSR4-205ENST00000447375 C1QTNF3-AMACRE9PGA6 284 aa12.57□□□□□ -0.4
SSR4-205ENST00000447375 DFFAO00273 331 aa12.57□□□□□ -0.4
SSR4-205ENST00000447375 PJA2O43164 708 aa12.57□□□□□ -0.4
SSR4-205ENST00000447375 SLC7A4O43246 635 aa12.57□□□□□ -0.4
SSR4-205ENST00000447375 POP4O95707 220 aaKnown RBP12.57□□□□□ -0.4
SSR4-205ENST00000447375 GSRP00390 522 aa12.57□□□□□ -0.4
SSR4-205ENST00000447375 COMTP21964 271 aa12.57□□□□□ -0.4
SSR4-205ENST00000447375 GJC1P36383 396 aa12.57□□□□□ -0.4
SSR4-205ENST00000447375 NUDT1P36639 197 aa12.57□□□□□ -0.4
SSR4-205ENST00000447375 DNA2P51530 1060 aa12.57□□□□□ -0.4
SSR4-205ENST00000447375 CCNHP51946 323 aaPredicted RBP12.57□□□□□ -0.4
SSR4-205ENST00000447375 FOXK1P85037 733 aa12.57□□□□□ -0.4
SSR4-205ENST00000447375 IL10RBQ08334 325 aa12.57□□□□□ -0.4
SSR4-205ENST00000447375 MYLK3Q32MK0 819 aa12.57□□□□□ -0.4
SSR4-205ENST00000447375 ANKRD20A8PQ5CZ79 823 aa12.57□□□□□ -0.4
SSR4-205ENST00000447375 ARSIQ5FYB1 569 aa12.57□□□□□ -0.4
SSR4-205ENST00000447375 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.57□□□□□ -0.4
SSR4-205ENST00000447375 RBM44Q6ZP01 1051 aaKnown RBP12.57□□□□□ -0.4
SSR4-205ENST00000447375 VSIG1Q86XK7 387 aa12.57□□□□□ -0.4
SSR4-205ENST00000447375 PTRH1Q86Y79 214 aaKnown RBP12.57□□□□□ -0.4
SSR4-205ENST00000447375 RHOT1Q8IXI2 618 aa12.57□□□□□ -0.4
SSR4-205ENST00000447375 NETO2Q8NC67 525 aa12.57□□□□□ -0.4
SSR4-205ENST00000447375 OR2AP1Q8NGE2 309 aa12.57□□□□□ -0.4
SSR4-205ENST00000447375 TPCN2Q8NHX9 752 aa12.57□□□□□ -0.4
SSR4-205ENST00000447375 ARRDC3Q96B67 414 aa12.57□□□□□ -0.4
SSR4-205ENST00000447375 CALN1Q9BXU9 219 aa12.57□□□□□ -0.4
SSR4-205ENST00000447375 TM6SF2Q9BZW4 377 aa12.57□□□□□ -0.4
SSR4-205ENST00000447375 LACRTQ9GZZ8 138 aa12.57□□□□□ -0.4
SSR4-205ENST00000447375 NLGN3Q9NZ94 848 aa12.57□□□□□ -0.4
SSR4-205ENST00000447375 HECAQ9UBI9 543 aaPredicted RBP12.57□□□□□ -0.4
SSR4-205ENST00000447375 UBA2Q9UBT2 640 aaPredicted RBP12.57□□□□□ -0.4
SSR4-205ENST00000447375 IL36AQ9UHA7 158 aa12.57□□□□□ -0.4
SSR4-205ENST00000447375 IPO11Q9UI26 975 aaKnown RBP12.57□□□□□ -0.4
SSR4-205ENST00000447375 SALL4Q9UJQ4 1053 aa12.57□□□□□ -0.4
SSR4-205ENST00000447375 SRPK3Q9UPE1 567 aa12.57□□□□□ -0.4
SSR4-205ENST00000447375 CA5BQ9Y2D0 317 aa12.57□□□□□ -0.4
SSR4-205ENST00000447375 WASF2Q9Y6W5 498 aa12.57□□□□□ -0.4
SSR4-205ENST00000447375 DUSP10Q9Y6W6 482 aa12.57□□□□□ -0.4
SSR4-205ENST00000447375 U3KQA8 63 aa12.57□□□□□ -0.4
SSR4-205ENST00000447375 TRPM6Q9BX84 2022 aa12.57□□□□□ -0.4
SSR4-205ENST00000447375 TEP1Q99973 2627 aaKnown RBP12.56□□□□□ -0.4
SSR4-205ENST00000447375 NEMP2A6NFY4 417 aa12.56□□□□□ -0.4
SSR4-205ENST00000447375 C3orf70A6NLC5 250 aaPredicted RBP12.56□□□□□ -0.4
SSR4-205ENST00000447375 PRAMEF26H0Y7S4 382 aa12.56□□□□□ -0.4
SSR4-205ENST00000447375 RNF103O00237 685 aa12.56□□□□□ -0.4
SSR4-205ENST00000447375 MAFKO60675 156 aa12.56□□□□□ -0.4
SSR4-205ENST00000447375 LEFTY1O75610 366 aa12.56□□□□□ -0.4
SSR4-205ENST00000447375 ITGA2BP08514 1039 aa12.56□□□□□ -0.4
SSR4-205ENST00000447375 SERPINB6P35237 376 aa12.56□□□□□ -0.4
SSR4-205ENST00000447375 VAV2P52735 878 aa12.56□□□□□ -0.4
SSR4-205ENST00000447375 SNRPD1P62314 119 aaKnown RBP12.56□□□□□ -0.4
SSR4-205ENST00000447375 CNTN1Q12860 1018 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms