RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 PRKD2Q9BZL6 878 aa16.89■□□□□ 0.29
LAPTM4B-201ENST00000445593 TCF7L2Q9NQB0 619 aa16.89■□□□□ 0.29
LAPTM4B-201ENST00000445593 VPS45Q9NRW7 570 aa16.89■□□□□ 0.29
LAPTM4B-201ENST00000445593 UBA2Q9UBT2 640 aaPredicted RBP16.89■□□□□ 0.29
LAPTM4B-201ENST00000445593 SPO11Q9Y5K1 396 aa16.89■□□□□ 0.29
LAPTM4B-201ENST00000445593 HDCP19113 662 aa16.89■□□□□ 0.29
LAPTM4B-201ENST00000445593 CDKN1CP49918 316 aaPredicted RBP16.89■□□□□ 0.29
LAPTM4B-201ENST00000445593 FSCBQ5H9T9 825 aa16.89■□□□□ 0.29
LAPTM4B-201ENST00000445593 ARL14EPQ8N8R7 260 aaPredicted RBP16.89■□□□□ 0.29
LAPTM4B-201ENST00000445593 STYXQ8WUJ0 223 aa16.89■□□□□ 0.29
LAPTM4B-201ENST00000445593 GPR78Q96P69 363 aa16.89■□□□□ 0.29
LAPTM4B-201ENST00000445593 TUBB6Q9BUF5 446 aa16.89■□□□□ 0.29
LAPTM4B-201ENST00000445593 TM6SF2Q9BZW4 377 aa16.89■□□□□ 0.29
LAPTM4B-201ENST00000445593 WASF2Q9Y6W5 498 aa16.89■□□□□ 0.29
LAPTM4B-201ENST00000445593 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.88■□□□□ 0.29
LAPTM4B-201ENST00000445593 KLHL2O95198 593 aa16.88■□□□□ 0.29
LAPTM4B-201ENST00000445593 TPBGLP0DKB5 382 aa16.88■□□□□ 0.29
LAPTM4B-201ENST00000445593 HMGA1P17096 107 aaKnown RBP16.88■□□□□ 0.29
LAPTM4B-201ENST00000445593 TFEBP19484 476 aa16.88■□□□□ 0.29
LAPTM4B-201ENST00000445593 TUFMP49411 452 aaKnown RBP16.88■□□□□ 0.29
LAPTM4B-201ENST00000445593 SMAD3P84022 425 aaKnown RBP16.88■□□□□ 0.29
LAPTM4B-201ENST00000445593 ZNF177Q13360 481 aaPredicted RBP16.88■□□□□ 0.29
LAPTM4B-201ENST00000445593 C1orf146Q5VVC0 180 aa16.88■□□□□ 0.29
LAPTM4B-201ENST00000445593 CNTN4Q8IWV2 1026 aa16.88■□□□□ 0.29
LAPTM4B-201ENST00000445593 MRPL46Q9H2W6 279 aaKnown RBP16.88■□□□□ 0.29
LAPTM4B-201ENST00000445593 TMEM39AQ9NV64 488 aa16.88■□□□□ 0.29
LAPTM4B-201ENST00000445593 MCM8Q9UJA3 840 aa16.88■□□□□ 0.29
LAPTM4B-201ENST00000445593 AGO1Q9UL18 857 aaKnown RBP16.88■□□□□ 0.29
LAPTM4B-201ENST00000445593 AIM2O14862 343 aa16.88■□□□□ 0.29
LAPTM4B-201ENST00000445593 ZDHHC11BP0C7U3 371 aa16.88■□□□□ 0.29
LAPTM4B-201ENST00000445593 MSX2P35548 267 aaPredicted RBP16.88■□□□□ 0.29
LAPTM4B-201ENST00000445593 ABL2P42684 1182 aa16.88■□□□□ 0.29
LAPTM4B-201ENST00000445593 IKBKEQ14164 716 aa16.88■□□□□ 0.29
LAPTM4B-201ENST00000445593 BTG3Q14201 252 aaPredicted RBP16.88■□□□□ 0.29
LAPTM4B-201ENST00000445593 SEL1L3Q68CR1 1132 aa16.88■□□□□ 0.29
LAPTM4B-201ENST00000445593 SLC8B1Q6J4K2 584 aa16.88■□□□□ 0.29
LAPTM4B-201ENST00000445593 TRIM67Q6ZTA4 783 aa16.88■□□□□ 0.29
LAPTM4B-201ENST00000445593 TMPRSS6Q8IU80 811 aa16.88■□□□□ 0.29
LAPTM4B-201ENST00000445593 SCUBE1Q8IWY4 988 aa16.88■□□□□ 0.29
LAPTM4B-201ENST00000445593 ULK2Q8IYT8 1036 aa16.88■□□□□ 0.29
LAPTM4B-201ENST00000445593 ZBED2Q9BTP6 218 aa16.88■□□□□ 0.29
LAPTM4B-201ENST00000445593 CWH43Q9H720 699 aa16.88■□□□□ 0.29
LAPTM4B-201ENST00000445593 TLE6Q9H808 572 aa16.88■□□□□ 0.29
LAPTM4B-201ENST00000445593 C15orf41Q9Y2V0 281 aa16.88■□□□□ 0.29
LAPTM4B-201ENST00000445593 A8MX80 341 aa16.87■□□□□ 0.29
LAPTM4B-201ENST00000445593 C1RP00736 705 aa16.87■□□□□ 0.29
LAPTM4B-201ENST00000445593 MZF1P28698 734 aaPredicted RBP16.87■□□□□ 0.29
LAPTM4B-201ENST00000445593 COPAP53621 1224 aa16.87■□□□□ 0.29
LAPTM4B-201ENST00000445593 CDH13P55290 713 aa16.87■□□□□ 0.29
LAPTM4B-201ENST00000445593 SEMG2Q02383 582 aa16.87■□□□□ 0.29
LAPTM4B-201ENST00000445593 LSM12Q3MHD2 195 aaKnown RBP16.87■□□□□ 0.29
LAPTM4B-201ENST00000445593 TMEM207Q6UWW9 146 aa16.87■□□□□ 0.29
LAPTM4B-201ENST00000445593 FRMD7Q6ZUT3 714 aa16.87■□□□□ 0.29
LAPTM4B-201ENST00000445593 CRIPAKQ8N1N5 446 aa16.87■□□□□ 0.29
LAPTM4B-201ENST00000445593 OR4K2Q8NGD2 314 aa16.87■□□□□ 0.29
LAPTM4B-201ENST00000445593 TNFRSF12AQ9NP84 129 aa16.87■□□□□ 0.29
LAPTM4B-201ENST00000445593 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.87■□□□□ 0.29
LAPTM4B-201ENST00000445593 ANKRD6Q9Y2G4 727 aa16.87■□□□□ 0.29
LAPTM4B-201ENST00000445593 VWA7Q9Y334 891 aa16.87■□□□□ 0.29
LAPTM4B-201ENST00000445593 H0Y626 953 aa16.87■□□□□ 0.29
LAPTM4B-201ENST00000445593 BAG2O95816 211 aa16.87■□□□□ 0.29
LAPTM4B-201ENST00000445593 KCNC1P48547 511 aa16.87■□□□□ 0.29
LAPTM4B-201ENST00000445593 RPL14P50914 215 aaKnown RBP16.87■□□□□ 0.29
LAPTM4B-201ENST00000445593 CYP4F8P98187 520 aa16.87■□□□□ 0.29
LAPTM4B-201ENST00000445593 RING1Q06587 406 aa16.87■□□□□ 0.29
LAPTM4B-201ENST00000445593 FRG1Q14331 258 aaKnown RBP16.87■□□□□ 0.29
LAPTM4B-201ENST00000445593 TCHHL1Q5QJ38 904 aaPredicted RBP16.87■□□□□ 0.29
LAPTM4B-201ENST00000445593 ATXN7L2Q5T6C5 722 aaPredicted RBP16.87■□□□□ 0.29
LAPTM4B-201ENST00000445593 KLHDC8BQ8IXV7 354 aa16.87■□□□□ 0.29
LAPTM4B-201ENST00000445593 RNF148Q8N7C7 305 aa16.87■□□□□ 0.29
LAPTM4B-201ENST00000445593 ZNF461Q8TAF7 563 aa16.87■□□□□ 0.29
LAPTM4B-201ENST00000445593 TTC1Q99614 292 aa16.87■□□□□ 0.29
LAPTM4B-201ENST00000445593 SH3GL3Q99963 347 aa16.87■□□□□ 0.29
LAPTM4B-201ENST00000445593 IGSF5Q9NSI5 407 aa16.87■□□□□ 0.29
LAPTM4B-201ENST00000445593 SLC7A8Q9UHI5 535 aa16.87■□□□□ 0.29
LAPTM4B-201ENST00000445593 FCF1Q9Y324 198 aaKnown RBP16.87■□□□□ 0.29
LAPTM4B-201ENST00000445593 DOCK6Q96HP0 2047 aa16.87■□□□□ 0.29
LAPTM4B-201ENST00000445593 LRRC14BA6NHZ5 514 aa16.87■□□□□ 0.29
LAPTM4B-201ENST00000445593 HNRNPCL1O60812 293 aaKnown RBP16.87■□□□□ 0.29
LAPTM4B-201ENST00000445593 TBL1XO60907 577 aa16.87■□□□□ 0.29
LAPTM4B-201ENST00000445593 GLP2RO95838 553 aa16.87■□□□□ 0.29
LAPTM4B-201ENST00000445593 CRABP2P29373 138 aa16.87■□□□□ 0.29
LAPTM4B-201ENST00000445593 MSLNQ13421 630 aaPredicted RBP16.87■□□□□ 0.29
LAPTM4B-201ENST00000445593 FAM83EQ2M2I3 478 aa16.87■□□□□ 0.29
LAPTM4B-201ENST00000445593 SLC39A5Q6ZMH5 540 aa16.87■□□□□ 0.29
LAPTM4B-201ENST00000445593 LSMEM2Q8N112 164 aa16.87■□□□□ 0.29
LAPTM4B-201ENST00000445593 ATP6AP2A0A1C7CYW4 349 aa16.86■□□□□ 0.29
LAPTM4B-201ENST00000445593 ATP6AP2O75787 350 aa16.86■□□□□ 0.29
LAPTM4B-201ENST00000445593 PTDSS1P48651 473 aaKnown RBP16.86■□□□□ 0.29
LAPTM4B-201ENST00000445593 MAPKAPK2P49137 400 aa16.86■□□□□ 0.29
LAPTM4B-201ENST00000445593 EPGNQ6UW88 154 aa16.86■□□□□ 0.29
LAPTM4B-201ENST00000445593 RIPOR1Q6ZS17 1223 aa16.86■□□□□ 0.29
LAPTM4B-201ENST00000445593 OTOP2Q7RTS6 562 aa16.86■□□□□ 0.29
LAPTM4B-201ENST00000445593 DNAJB7Q7Z6W7 309 aaPredicted RBP16.86■□□□□ 0.29
LAPTM4B-201ENST00000445593 DEFB107AQ8IZN7 70 aa16.86■□□□□ 0.29
LAPTM4B-201ENST00000445593 TEX26Q8N6G2 289 aa16.86■□□□□ 0.29
LAPTM4B-201ENST00000445593 PTCD2Q8WV60 388 aaKnown RBP16.86■□□□□ 0.29
LAPTM4B-201ENST00000445593 LENG8Q96PV6 779 aaPredicted RBP16.86■□□□□ 0.29
LAPTM4B-201ENST00000445593 TMEM175Q9BSA9 504 aa16.86■□□□□ 0.29
LAPTM4B-201ENST00000445593 DRC3Q9H069 523 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms