RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 RAMP2O60895 175 aa14.49□□□□□ -0.09
HMGN1-208ENST00000443046 LRIG2O94898 1065 aa14.49□□□□□ -0.09
HMGN1-208ENST00000443046 IGSF6O95976 241 aa14.49□□□□□ -0.09
HMGN1-208ENST00000443046 TRIM23P36406 574 aa14.49□□□□□ -0.09
HMGN1-208ENST00000443046 MMP12P39900 470 aa14.49□□□□□ -0.09
HMGN1-208ENST00000443046 LIG3P49916 1009 aa14.49□□□□□ -0.09
HMGN1-208ENST00000443046 BPIFB4P59827 614 aa14.49□□□□□ -0.09
HMGN1-208ENST00000443046 ARHGEF7Q14155 803 aa14.49□□□□□ -0.09
HMGN1-208ENST00000443046 C2CD6Q53TS8 623 aa14.49□□□□□ -0.09
HMGN1-208ENST00000443046 SPECC1LQ69YQ0 1117 aa14.49□□□□□ -0.09
HMGN1-208ENST00000443046 RWDD4Q6NW29 188 aaKnown RBP14.49□□□□□ -0.09
HMGN1-208ENST00000443046 TAF8Q7Z7C8 310 aa14.49□□□□□ -0.09
HMGN1-208ENST00000443046 PIM3Q86V86 326 aa14.49□□□□□ -0.09
HMGN1-208ENST00000443046 OR56A4Q8NGH8 313 aa14.49□□□□□ -0.09
HMGN1-208ENST00000443046 GPBAR1Q8TDU6 330 aa14.49□□□□□ -0.09
HMGN1-208ENST00000443046 JPH3Q8WXH2 748 aaPredicted RBP14.49□□□□□ -0.09
HMGN1-208ENST00000443046 PMEPA1Q969W9 287 aa14.49□□□□□ -0.09
HMGN1-208ENST00000443046 TAAR9Q96RI9 348 aa14.49□□□□□ -0.09
HMGN1-208ENST00000443046 KLC2Q9H0B6 622 aa14.49□□□□□ -0.09
HMGN1-208ENST00000443046 TMEM168Q9H0V1 697 aa14.49□□□□□ -0.09
HMGN1-208ENST00000443046 RDH14Q9HBH5 336 aa14.49□□□□□ -0.09
HMGN1-208ENST00000443046 LHX3Q9UBR4 397 aa14.49□□□□□ -0.09
HMGN1-208ENST00000443046 CELSR2Q9HCU4 2923 aa14.48□□□□□ -0.09
HMGN1-208ENST00000443046 ICE1Q9Y2F5 2266 aa14.48□□□□□ -0.09
HMGN1-208ENST00000443046 IGHV5-10-1A0A0J9YXX1 117 aa14.48□□□□□ -0.09
HMGN1-208ENST00000443046 CFAP69A5D8W1 941 aa14.48□□□□□ -0.09
HMGN1-208ENST00000443046 PIGNO95427 931 aa14.48□□□□□ -0.09
HMGN1-208ENST00000443046 FGFR1OPO95684 399 aaKnown RBP14.48□□□□□ -0.09
HMGN1-208ENST00000443046 LIFP15018 202 aa14.48□□□□□ -0.09
HMGN1-208ENST00000443046 CYP11B1P15538 503 aa14.48□□□□□ -0.09
HMGN1-208ENST00000443046 UGT1A3P35503 534 aa14.48□□□□□ -0.09
HMGN1-208ENST00000443046 ATP1A2P50993 1020 aa14.48□□□□□ -0.09
HMGN1-208ENST00000443046 RHOAP61586 193 aa14.48□□□□□ -0.09
HMGN1-208ENST00000443046 ATP11AP98196 1134 aa14.48□□□□□ -0.09
HMGN1-208ENST00000443046 NETO2Q8NC67 525 aa14.48□□□□□ -0.09
HMGN1-208ENST00000443046 CCL4L1Q8NHW4 92 aa14.48□□□□□ -0.09
HMGN1-208ENST00000443046 TBC1D31Q96DN5 1066 aa14.48□□□□□ -0.09
HMGN1-208ENST00000443046 NUDT22Q9BRQ3 303 aa14.48□□□□□ -0.09
HMGN1-208ENST00000443046 SUV39H2Q9H5I1 410 aa14.48□□□□□ -0.09
HMGN1-208ENST00000443046 MRPL40Q9NQ50 206 aaKnown RBP14.48□□□□□ -0.09
HMGN1-208ENST00000443046 AKAP7Q9P0M2 348 aaPredicted RBP14.48□□□□□ -0.09
HMGN1-208ENST00000443046 GOLGA6L4A6NEF3 574 aa14.47□□□□□ -0.09
HMGN1-208ENST00000443046 B4DGG1 531 aa14.47□□□□□ -0.09
HMGN1-208ENST00000443046 GOLGA8SH3BPF8 625 aa14.47□□□□□ -0.09
HMGN1-208ENST00000443046 BUB1BO60566 1050 aaPredicted RBP14.47□□□□□ -0.09
HMGN1-208ENST00000443046 LSM8O95777 96 aaKnown RBP14.47□□□□□ -0.09
HMGN1-208ENST00000443046 PCCBP05166 539 aa14.47□□□□□ -0.09
HMGN1-208ENST00000443046 PLEKP08567 350 aaPredicted RBP14.47□□□□□ -0.09
HMGN1-208ENST00000443046 GM2AP17900 193 aa14.47□□□□□ -0.09
HMGN1-208ENST00000443046 CD1CP29017 333 aa14.47□□□□□ -0.09
HMGN1-208ENST00000443046 CCR10P46092 362 aa14.47□□□□□ -0.09
HMGN1-208ENST00000443046 OR1D5P58170 312 aa14.47□□□□□ -0.09
HMGN1-208ENST00000443046 SQSTM1Q13501 440 aa14.47□□□□□ -0.09
HMGN1-208ENST00000443046 CYTH1Q15438 398 aa14.47□□□□□ -0.09
HMGN1-208ENST00000443046 C15orf59Q2T9L4 293 aaPredicted RBP14.47□□□□□ -0.09
HMGN1-208ENST00000443046 CCDC14Q49A88 953 aa14.47□□□□□ -0.09
HMGN1-208ENST00000443046 MAP9Q49MG5 647 aa14.47□□□□□ -0.09
HMGN1-208ENST00000443046 ZSWIM9Q86XI8 627 aa14.47□□□□□ -0.09
HMGN1-208ENST00000443046 NRROSQ86YC3 692 aa14.47□□□□□ -0.09
HMGN1-208ENST00000443046 FAM26EQ8N5C1 309 aa14.47□□□□□ -0.09
HMGN1-208ENST00000443046 EMC1Q8N766 993 aa14.47□□□□□ -0.09
HMGN1-208ENST00000443046 RCBTB1Q8NDN9 531 aa14.47□□□□□ -0.09
HMGN1-208ENST00000443046 CENPIQ92674 756 aaPredicted RBP14.47□□□□□ -0.09
HMGN1-208ENST00000443046 ZNF641Q96N77 438 aaPredicted RBP14.47□□□□□ -0.09
HMGN1-208ENST00000443046 CATSPER2Q96P56 530 aa14.47□□□□□ -0.09
HMGN1-208ENST00000443046 DDA1Q9BW61 102 aa14.47□□□□□ -0.09
HMGN1-208ENST00000443046 DPEP2Q9H4A9 486 aa14.47□□□□□ -0.09
HMGN1-208ENST00000443046 SPATS2LQ9NUQ6 558 aaKnown RBP14.47□□□□□ -0.09
HMGN1-208ENST00000443046 DAAM1Q9Y4D1 1078 aa14.47□□□□□ -0.09
HMGN1-208ENST00000443046 LRBAP50851 2863 aa14.47□□□□□ -0.09
HMGN1-208ENST00000443046 CACNB4O00305 520 aaPredicted RBP14.46□□□□□ -0.09
HMGN1-208ENST00000443046 BIN1O00499 593 aa14.46□□□□□ -0.09
HMGN1-208ENST00000443046 FGF1P05230 155 aa14.46□□□□□ -0.09
HMGN1-208ENST00000443046 XPAP23025 273 aaPredicted RBP14.46□□□□□ -0.09
HMGN1-208ENST00000443046 STAT1P42224 750 aa14.46□□□□□ -0.09
HMGN1-208ENST00000443046 LIMK2P53671 638 aa14.46□□□□□ -0.09
HMGN1-208ENST00000443046 TRA2AQ13595 282 aaKnown RBP eCLIP14.46□□□□□ -0.098e-24■■□□□ 11.7
HMGN1-208ENST00000443046 GRM3Q14832 879 aa14.46□□□□□ -0.09
HMGN1-208ENST00000443046 ERAP2Q6P179 960 aa14.46□□□□□ -0.09
HMGN1-208ENST00000443046 BRAT1Q6PJG6 821 aa14.46□□□□□ -0.09
HMGN1-208ENST00000443046 STRADAQ7RTN6 431 aa14.46□□□□□ -0.09
HMGN1-208ENST00000443046 DNAAF5Q86Y56 855 aa14.46□□□□□ -0.09
HMGN1-208ENST00000443046 RTL3Q8N8U3 475 aaKnown RBP14.46□□□□□ -0.09
HMGN1-208ENST00000443046 SLC45A3Q96JT2 553 aa14.46□□□□□ -0.09
HMGN1-208ENST00000443046 CCDC74BQ96LY2 380 aa14.46□□□□□ -0.09
HMGN1-208ENST00000443046 LGR4Q9BXB1 951 aa14.46□□□□□ -0.09
HMGN1-208ENST00000443046 SPRY4Q9C004 299 aa14.46□□□□□ -0.09
HMGN1-208ENST00000443046 ATP8A1Q9Y2Q0 1164 aa14.46□□□□□ -0.09
HMGN1-208ENST00000443046 B3GALT1Q9Y5Z6 326 aa14.46□□□□□ -0.09
HMGN1-208ENST00000443046 FAM170AA1A519 330 aa14.45□□□□□ -0.1
HMGN1-208ENST00000443046 C2CD4BA6NLJ0 364 aa14.45□□□□□ -0.1
HMGN1-208ENST00000443046 ZNF891A8MT65 544 aaPredicted RBP14.45□□□□□ -0.1
HMGN1-208ENST00000443046 CAPN5O15484 640 aaPredicted RBP14.45□□□□□ -0.1
HMGN1-208ENST00000443046 RECQL5O94762 991 aaPredicted RBP14.45□□□□□ -0.1
HMGN1-208ENST00000443046 KELP23276 732 aa14.45□□□□□ -0.1
HMGN1-208ENST00000443046 PTPN9P43378 593 aa14.45□□□□□ -0.1
HMGN1-208ENST00000443046 GPR3P46089 330 aa14.45□□□□□ -0.1
HMGN1-208ENST00000443046 CD97P48960 835 aa14.45□□□□□ -0.1
HMGN1-208ENST00000443046 MAZP56270 477 aaKnown RBP14.45□□□□□ -0.1
HMGN1-208ENST00000443046 HDAC4P56524 1084 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms