RNA–Protein interactions for RNA: ENST00000442510.6

PTPRC-209, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRC, Length 5,164 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-209ENST00000442510 RETSATQ6NUM9 610 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 UGT2A3Q6UWM9 527 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 P2RY8Q86VZ1 359 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 ZBTB8OSQ8IWT0 167 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 TRMT2AQ8IZ69 625 aaKnown RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 PGBD3Q8N328 593 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 TRMT10AQ8TBZ6 339 aaKnown RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 TRPM4Q8TD43 1214 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 OR2M4Q96R27 311 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 ZC3H12CQ9C0D7 883 aaKnown RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 ANKHQ9HCJ1 492 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 GPN1Q9HCN4 374 aaPredicted RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 TAS2R3Q9NYW6 316 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 VPS28Q9UK41 221 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 CYP2D7A0A087X1C5 515 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 ASB14A6NK59 587 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 BET1O15155 118 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 HOXC11O43248 304 aaPredicted RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 SOX30O94993 753 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 IL1BP01584 269 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 CYP1A1P04798 512 aaPredicted RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 SAGP10523 405 aaPredicted RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 IFNAR1P17181 557 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 ITGB6P18564 788 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 ALDH9A1P49189 494 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 FAM69CQ0P6D2 419 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 RRP1BQ14684 758 aaKnown RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 SFT2D3Q587I9 215 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 AKR1C8PQ5T2L2 129 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 KHDRBS2Q5VWX1 349 aaKnown RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 PGAP1Q75T13 922 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 METTL16Q86W50 562 aaKnown RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 TDRPQ86YL5 185 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 CPA6Q8N4T0 437 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 SETD9Q8NE22 299 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 SETD6Q8TBK2 473 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 PIWIL2Q8TC59 973 aaKnown RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 TOP1MTQ969P6 601 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 ZNF669Q96BR6 464 aaPredicted RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 EYA1Q99502 592 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 TREX2Q9BQ50 279 aaPredicted RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 CCDC8Q9H0W5 538 aaPredicted RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 MROH8Q9H579 483 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 MRPL47Q9HD33 250 aaKnown RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 C19orf12Q9NSK7 152 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 KCNK4Q9NYG8 393 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 MAD2L2Q9UI95 211 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 ABT1Q9ULW3 272 aaKnown RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 FIS1Q9Y3D6 152 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 U3KQV3 271 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 OR2AT4A6NND4 320 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 ADAMTS4O75173 837 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 VPS4BO75351 444 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 SNAPC5O75971 98 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 PGLSO95336 258 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 GH2P01242 217 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 NUDT17P0C025 328 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 SLC2A1P11166 492 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 STAT5AP42229 794 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 SLC1A4P43007 532 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 RENBPP51606 427 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 ARSDP51689 593 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 TMBIM6P55061 237 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 SPRED3Q2MJR0 410 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 MCMDC2Q4G0Z9 681 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 TMEM31Q5JXX7 168 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 INTS11Q5TA45 600 aaKnown RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 C1orf189Q5VU69 101 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 NSMFQ6X4W1 530 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 MSANTD1Q6ZTZ1 278 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 SV2BQ7L1I2 683 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 CHST3Q7LGC8 479 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 GPR180Q86V85 440 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 IQCHQ86VS3 1027 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 RP9Q8TA86 221 aaKnown RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 HSFY1Q96LI6 401 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 TMEM68Q96MH6 324 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 TMEM121Q9BTD3 319 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 DPCDQ9BVM2 203 aaPredicted RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 BEX2Q9BXY8 128 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 MROQ9BYG7 248 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 FAM83DQ9H4H8 585 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 ACTL8Q9H568 366 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 OPA3Q9H6K4 179 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 SERHLQ9NQF3 203 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 CREBZFQ9NS37 354 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 RAB20Q9NX57 234 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 SPHK1Q9NYA1 384 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 C3orf18Q9UK00 162 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 PNMA8BQ9ULN7 279 aaPredicted RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 FARSAQ9Y285 508 aaKnown RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 CAPN6Q9Y6Q1 641 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 KIAA0232Q92628 1395 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 C2orf71A6NGG8 1288 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 LACTBL1A8MY62 500 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 SULT1C2O00338 296 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 MDM4O15151 490 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 MSI1O43347 362 aaKnown RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 LCMT2O60294 686 aaKnown RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 EDF1O60869 148 aaKnown RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms