RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 TMEM191BP0C7N4 346 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 AKR1A1P14550 325 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 ATF7P17544 494 aaPredicted RBP2.79□□□□□ -1.96
LIG4-203ENST00000442234 FGFR3P22607 806 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 POLR2BP30876 1174 aaKnown RBP2.79□□□□□ -1.96
LIG4-203ENST00000442234 IDUAP35475 653 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 GP5P40197 560 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 OPRL1P41146 370 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 RPL21P46778 160 aaKnown RBP2.79□□□□□ -1.96
LIG4-203ENST00000442234 NPY2RP49146 381 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 ARL4CP56559 192 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 WDR4P57081 412 aaKnown RBP2.79□□□□□ -1.96
LIG4-203ENST00000442234 PTENP60484 403 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 ERVFC1P60507 584 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 GPLD1P80108 840 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 BNC1Q01954 994 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 C19orf57Q0VDD7 668 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 MTM1Q13496 603 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 GK3PQ14409 553 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 FSCN1Q16658 493 aaKnown RBP2.79□□□□□ -1.96
LIG4-203ENST00000442234 LRIT3Q3SXY7 679 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 RUNDC3AQ59EK9 446 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 TOR2AQ5JU69 321 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 SLX4IPQ5VYV7 408 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 ALKBH5Q6P6C2 394 aaKnown RBP2.79□□□□□ -1.96
LIG4-203ENST00000442234 C19orf48Q6RUI8 117 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 DPY19L3Q6ZPD9 716 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 C15orf52Q6ZUT6 534 aaKnown RBP2.79□□□□□ -1.96
LIG4-203ENST00000442234 CATSPER4Q7RTX7 472 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 GLRX5Q86SX6 157 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 SLCO6A1Q86UG4 719 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 SPATA2LQ8IUW3 424 aaPredicted RBP2.79□□□□□ -1.96
LIG4-203ENST00000442234 P3H2Q8IVL5 708 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 FBXW8Q8N3Y1 598 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 ADCY4Q8NFM4 1077 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 BPIFB6Q8NFQ5 453 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 DBF4BQ8NFT6 615 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 ZNF420Q8TAQ5 688 aaPredicted RBP2.79□□□□□ -1.96
LIG4-203ENST00000442234 FBXO30Q8TB52 745 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 FAM174AQ8TBP5 190 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 PNPT1Q8TCS8 783 aaKnown RBP2.79□□□□□ -1.96
LIG4-203ENST00000442234 ASZ1Q8WWH4 475 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 GTF2H4Q92759 462 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 PROX1Q92786 737 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 TXNDC15Q96J42 360 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 VCPIP1Q96JH7 1222 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 FEM1CQ96JP0 617 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 ASB2Q96Q27 587 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 GDF15Q99988 308 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 TINF2Q9BSI4 451 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 TMEM109Q9BVC6 243 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 C1QTNF7Q9BXJ2 289 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 GON7Q9BXV9 100 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 PACSIN1Q9BY11 444 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 PRRG3Q9BZD7 231 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 CCDC90BQ9GZT6 254 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 TMEM168Q9H0V1 697 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 SEMA6AQ9H2E6 1030 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 RPF2Q9H7B2 306 aaKnown RBP2.79□□□□□ -1.96
LIG4-203ENST00000442234 BRD9Q9H8M2 597 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 CPNE5Q9HCH3 593 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 KBTBD4Q9NVX7 518 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 PIH1D1Q9NWS0 290 aaKnown RBP2.79□□□□□ -1.96
LIG4-203ENST00000442234 TMEM260Q9NX78 707 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 VTI1BQ9UEU0 232 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 MLXQ9UH92 298 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 DNMT3LQ9UJW3 386 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 PACSIN3Q9UKS6 424 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 CNOT11Q9UKZ1 510 aaKnown RBP2.79□□□□□ -1.96
LIG4-203ENST00000442234 BTBD3Q9Y2F9 522 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 C4BP0C0L5 1744 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 MAP2P11137 1827 aaKnown RBP2.79□□□□□ -1.96
LIG4-203ENST00000442234 TAF1LQ8IZX4 1826 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 POLR2AP24928 1970 aaKnown RBP2.79□□□□□ -1.96
LIG4-203ENST00000442234 DOCK8Q8NF50 2099 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 A0A1W2PQJ5 194 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 HMX3A6NHT5 357 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 TTLL8A6PVC2 850 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 TMX2-CTNND1H3BSU7 103 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 CES2O00748 559 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 TTC4O95801 387 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 OLFM2O95897 454 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 GLAP06280 429 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 DCNP07585 359 aaKnown RBP2.79□□□□□ -1.96
LIG4-203ENST00000442234 MTHFD1P11586 935 aaKnown RBP2.79□□□□□ -1.96
LIG4-203ENST00000442234 BTF3P20290 206 aaKnown RBP2.79□□□□□ -1.96
LIG4-203ENST00000442234 TBXAS1P24557 533 aaPredicted RBP2.79□□□□□ -1.96
LIG4-203ENST00000442234 ADRA1DP25100 572 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 G0S2P27469 103 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 NMT1P30419 496 aaKnown RBP2.79□□□□□ -1.96
LIG4-203ENST00000442234 GRIK1P39086 918 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 RGS7P49802 495 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 GATMP50440 423 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 KPNA2P52292 529 aaKnown RBP2.79□□□□□ -1.96
LIG4-203ENST00000442234 CAPZA1P52907 286 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 OR2B6P58173 313 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 ABCE1P61221 599 aaKnown RBP2.79□□□□□ -1.96
LIG4-203ENST00000442234 JAG1P78504 1218 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 DEFB103AP81534 67 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 IL1RL1Q01638 556 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms