RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 SH2D3AQ9BRG2 576 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 MXRA8Q9BRK3 442 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 ZNF577Q9BSK1 485 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 PAGR1Q9BTK6 254 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 TEKT3Q9BXF9 490 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 IFIH1Q9BYX4 1025 aaKnown RBP3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 ANKZF1Q9H8Y5 726 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 MYOZ2Q9NPC6 264 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 OLFML3Q9NRN5 406 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 SACM1LQ9NTJ5 587 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 MRPS18AQ9NVS2 196 aaKnown RBP3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 RGL1Q9NZL6 768 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 AIPL1Q9NZN9 384 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 KCND2Q9NZV8 630 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 BCCIPQ9P287 314 aaKnown RBP eCLIP3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 HDAC6Q9UBN7 1215 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 SEL1LQ9UBV2 794 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 TRIM10Q9UDY6 481 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 RGS17Q9UGC6 210 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 ARMCX3Q9UH62 379 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 RAB21Q9UL25 225 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 CCPG1Q9ULG6 757 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 ODF2LQ9ULJ1 636 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 GABRQQ9UN88 632 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 TFR2Q9UP52 801 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 SSX2IPQ9Y2D8 614 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 BTBD3Q9Y2F9 522 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 JRKLQ9Y4A0 524 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 BZW2Q9Y6E2 419 aaKnown RBP3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 ADAMTSL1Q8N6G6 1762 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 SLX4Q8IY92 1834 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 A0A087WWL8 130 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 TARSL2A2RTX5 802 aaKnown RBP3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 FAM234BA2RU67 622 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 ARHGEF35A5YM69 484 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 RRN3P2A6NIE6 340 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 AQP12BA6NM10 295 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 PRSS47A8MTI9 375 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 RSPH10B2B2RC85 870 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 EIF3FO00303 357 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 IPO5O00410 1097 aaKnown RBP3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 TRIM38O00635 465 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 WDR46O15213 610 aaKnown RBP3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 CLIC2O15247 247 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 CHMP2AO43633 222 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 TLR2O60603 784 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 SRGAP2O75044 1071 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 ZBED4O75132 1171 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 GCATO75600 419 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 AKAP3O75969 853 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 MOCS3O95396 460 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 MT-ND5P03915 603 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 NR3C1P04150 777 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 RHOXF2BP0C7M4 288 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 RSPH10BP0C881 870 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 TCP1P17987 556 aaKnown RBP3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 RPS12P25398 132 aaKnown RBP3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 PON1P27169 355 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 ANXA13P27216 316 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 EPHA3P29320 983 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 NMT1P30419 496 aaKnown RBP3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 PSMC2P35998 433 aaKnown RBP3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 RXRGP48443 463 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 HSD17B4P51659 736 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 NAP1L1P55209 391 aaKnown RBP3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 ARL4CP56559 192 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 CYP4F2P78329 520 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 GHRHRQ02643 423 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 GFPT1Q06210 699 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 DMTNQ08495 405 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 KLHL30Q0D2K2 578 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 GPS2Q13227 327 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 PRKG1Q13976 671 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 BOP1Q14137 746 aaKnown RBP3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 SPARCL1Q14515 664 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 TRIP6Q15654 476 aaKnown RBP3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 NAB2Q15742 525 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 NFIL3Q16649 462 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 EXOC3L4Q17RC7 722 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 TDRD12Q587J7 1177 aaKnown RBP3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 BEND6Q5SZJ8 279 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 DEPDC1Q5TB30 811 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 ANO7Q6IWH7 933 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 WDR93Q6P2C0 686 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 KIRREL2Q6UWL6 708 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 GBP6Q6ZN66 633 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 C1orf122Q6ZSJ8 110 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 BEND5Q7L4P6 421 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 NIPA1Q7RTP0 329 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 ZNF720Q7Z2F6 126 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 MIER3Q7Z3K6 550 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 MRPL10Q7Z7H8 261 aaKnown RBP3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 IZUMO1Q8IYV9 350 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 MPP5Q8N3R9 675 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 MMGT1Q8N4V1 131 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 DNAJC5GQ8N7S2 189 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 ZNF366Q8N895 744 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 TERB1Q8NA31 727 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 GOLGA5Q8TBA6 731 aa3.62□□□□□ -1.83
HMGB3P11-201ENST00000440127 STT3BQ8TCJ2 826 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms