RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 STX5Q13190 355 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 LRP8Q14114 963 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 AMHR2Q16671 573 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 RGS21Q2M5E4 152 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 ZNF354CQ86Y25 554 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 HACE1Q8IYU2 909 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 CBR4Q8N4T8 237 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 SLC15A4Q8N697 577 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 ZNF669Q96BR6 464 aaPredicted RBP8.61□□□□□ -1.03
HPS4-206ENST00000439453 LGMNQ99538 433 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 ADI1Q9BV57 179 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 SIX4Q9UIU6 781 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 SNAP91O60641 907 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 SBK3P0C264 359 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 GSTT2P0CG29 244 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 GSTT2BP0CG30 244 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 PSMB4P28070 264 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 GALNT2Q10471 571 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 C6orf10Q5SRN2 563 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 REP15Q6BDI9 236 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 LRRC8EQ6NSJ5 796 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 CCDC80Q76M96 950 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 ERMP1Q7Z2K6 904 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 IFNLR1Q8IU57 520 aaPredicted RBP8.61□□□□□ -1.03
HPS4-206ENST00000439453 TMEM151AQ8N4L1 468 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 PACRGLQ8N7B6 248 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.61□□□□□ -1.03
HPS4-206ENST00000439453 ACVR1CQ8NER5 493 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 TRUB1Q8WWH5 349 aaKnown RBP8.61□□□□□ -1.03
HPS4-206ENST00000439453 CEP41Q9BYV8 373 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 SPAG4Q9NPE6 437 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 CACNA2D2Q9NY47 1150 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 HESX1Q9UBX0 185 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 CD300AQ9UGN4 299 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 SARDHQ9UL12 918 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 PADI3Q9ULW8 664 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 ERGIC3Q9Y282 383 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 YBX2Q9Y2T7 364 aaKnown RBP8.61□□□□□ -1.03
HPS4-206ENST00000439453 CORINQ9Y5Q5 1042 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 CFAP99D6REC4 459 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 RNF103O00237 685 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 SDHDO14521 159 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 DARSP14868 501 aaKnown RBP8.61□□□□□ -1.03
HPS4-206ENST00000439453 LAMTOR4Q0VGL1 99 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 MERTKQ12866 999 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 BCL2A1Q16548 175 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 DPYSL2Q16555 572 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 ZNF362Q5T0B9 420 aaPredicted RBP8.61□□□□□ -1.03
HPS4-206ENST00000439453 NCBP2-AS2Q69YL0 99 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 SPRED2Q7Z698 418 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 ZBTB46Q86UZ6 589 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 CAMK1DQ8IU85 385 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 FAM110BQ8TC76 370 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 CANT1Q8WVQ1 401 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 SCYL1Q96KG9 808 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 CSPG4P5Q96PW8 444 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 TRPC7Q9HCX4 862 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 SFMBT1Q9UHJ3 866 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 A0A087WZ62 844 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 HACD1B0YJ81 288 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 TMEM233B4DJY2 109 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 RPLP2P05387 115 aaKnown RBP8.61□□□□□ -1.03
HPS4-206ENST00000439453 ETFBP38117 255 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 RPS3AP61247 264 aaKnown RBP8.61□□□□□ -1.03
HPS4-206ENST00000439453 TRAF2Q12933 501 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 NME3Q13232 169 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 CYP2A13Q16696 494 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 IRAK1BP1Q5VVH5 260 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 DHFR2Q86XF0 187 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 SCAIQ8N9R8 606 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 KDM1BQ8NB78 822 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 ACDQ96AP0 544 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 KCTD15Q96SI1 283 aaPredicted RBP8.61□□□□□ -1.03
HPS4-206ENST00000439453 FDXACB1Q9BRP7 624 aaPredicted RBP8.61□□□□□ -1.03
HPS4-206ENST00000439453 TSPYL2Q9H2G4 693 aaPredicted RBP8.61□□□□□ -1.03
HPS4-206ENST00000439453 LRRC40Q9H9A6 602 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 ARMC1Q9NVT9 282 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 GPC6Q9Y625 555 aaPredicted RBP8.61□□□□□ -1.03
HPS4-206ENST00000439453 SLC30A1Q9Y6M5 507 aa8.61□□□□□ -1.03
HPS4-206ENST00000439453 TIMM44O43615 452 aa8.6□□□□□ -1.03
HPS4-206ENST00000439453 NOL3O60936 208 aaKnown RBP8.6□□□□□ -1.03
HPS4-206ENST00000439453 DDHD2O94830 711 aa8.6□□□□□ -1.03
HPS4-206ENST00000439453 MYOGP15173 224 aa8.6□□□□□ -1.03
HPS4-206ENST00000439453 ZNF182P17025 639 aaPredicted RBP8.6□□□□□ -1.03
HPS4-206ENST00000439453 HDCP19113 662 aa8.6□□□□□ -1.03
HPS4-206ENST00000439453 GLRBP48167 497 aa8.6□□□□□ -1.03
HPS4-206ENST00000439453 EFNA5P52803 228 aa8.6□□□□□ -1.03
HPS4-206ENST00000439453 CD300CQ08708 224 aa8.6□□□□□ -1.03
HPS4-206ENST00000439453 NFATC3Q12968 1075 aa8.6□□□□□ -1.03
HPS4-206ENST00000439453 ITGADQ13349 1161 aa8.6□□□□□ -1.03
HPS4-206ENST00000439453 OLIG2Q13516 323 aa8.6□□□□□ -1.03
HPS4-206ENST00000439453 MAPRE2Q15555 327 aa8.6□□□□□ -1.03
HPS4-206ENST00000439453 SLC36A3Q495N2 470 aa8.6□□□□□ -1.03
HPS4-206ENST00000439453 SAMD4BQ5PRF9 694 aaKnown RBP8.6□□□□□ -1.03
HPS4-206ENST00000439453 INTS11Q5TA45 600 aaKnown RBP8.6□□□□□ -1.03
HPS4-206ENST00000439453 IER5Q5VY09 327 aa8.6□□□□□ -1.03
HPS4-206ENST00000439453 OLFML1Q6UWY5 402 aa8.6□□□□□ -1.03
HPS4-206ENST00000439453 KCTD8Q6ZWB6 473 aa8.6□□□□□ -1.03
HPS4-206ENST00000439453 TMEM110Q86TL2 294 aa8.6□□□□□ -1.03
HPS4-206ENST00000439453 PELI3Q8N2H9 469 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms