RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 AQP4P55087 323 aa13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 ITKQ08881 620 aa13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 MSLNQ13421 630 aaPredicted RBP13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 TAF12Q16514 161 aa13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 KLHDC8BQ8IXV7 354 aa13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 FSTL5Q8N475 847 aaPredicted RBP13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 TMEM151AQ8N4L1 468 aa13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 SREK1Q8WXA9 508 aaKnown RBP13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 PABPC5Q96DU9 382 aaKnown RBP13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 CDK5RAP1Q96SZ6 601 aaKnown RBP13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 MRPL17Q9NRX2 175 aaKnown RBP13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 MIA3Q5JRA6 1907 aa13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 FAM95CA0A1B0GW59 222 aa13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 J3KR12 359 aa13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 ZBTB14O43829 449 aa13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 CA8P35219 290 aa13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 PPM1AP35813 382 aa13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 GRIA4P48058 902 aa13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 KPNA1P52294 538 aaPredicted RBP13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 NAGLUP54802 743 aa13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 INHBCP55103 352 aa13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 TWF1Q12792 350 aa13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 TRMT5Q32P41 509 aaKnown RBP13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 NADSYN1Q6IA69 706 aa13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 TIGD7Q6NT04 549 aaPredicted RBP13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 CIR1Q86X95 450 aaPredicted RBP13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 OVCA2Q8WZ82 227 aa13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 NMD3Q96D46 503 aaKnown RBP13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 HMCESQ96FZ2 354 aa13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 RPRD1AQ96P16 312 aaPredicted RBP13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 OR52B2Q96RD2 323 aa13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 OMDQ99983 421 aa13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 WDR55Q9H6Y2 383 aaPredicted RBP13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 NT5MQ9NPB1 228 aa13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 ENTPD7Q9NQZ7 604 aa13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 NSMCE4AQ9NXX6 385 aa13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 LMCD1Q9NZU5 365 aa13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 XPR1Q9UBH6 696 aa13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 ALPK3Q96L96 1907 aa13.96□□□□□ -0.17
PTCHD3-201ENST00000438700 IGLV3-10A0A075B6K4 115 aa13.96□□□□□ -0.17
PTCHD3-201ENST00000438700 TEX28O15482 410 aa13.96□□□□□ -0.17
PTCHD3-201ENST00000438700 COCHO43405 550 aa13.96□□□□□ -0.17
PTCHD3-201ENST00000438700 FGF18O76093 207 aa13.96□□□□□ -0.17
PTCHD3-201ENST00000438700 PGM3O95394 542 aa13.96□□□□□ -0.17
PTCHD3-201ENST00000438700 PEX2P28328 305 aa13.96□□□□□ -0.17
PTCHD3-201ENST00000438700 WNT3AP56704 352 aa13.96□□□□□ -0.17
PTCHD3-201ENST00000438700 SLC12A1Q13621 1099 aa13.96□□□□□ -0.17
PTCHD3-201ENST00000438700 HECTD3Q5T447 861 aa13.96□□□□□ -0.17
PTCHD3-201ENST00000438700 ZYG11AQ6WRX3 759 aa13.96□□□□□ -0.17
PTCHD3-201ENST00000438700 SLC26A7Q8TE54 656 aa13.96□□□□□ -0.17
PTCHD3-201ENST00000438700 NXNL1Q96CM4 212 aa13.96□□□□□ -0.17
PTCHD3-201ENST00000438700 SGF29Q96ES7 293 aa13.96□□□□□ -0.17
PTCHD3-201ENST00000438700 MYEOVQ96EZ4 313 aa13.96□□□□□ -0.17
PTCHD3-201ENST00000438700 ELMO2Q96JJ3 720 aa13.96□□□□□ -0.17
PTCHD3-201ENST00000438700 MYRFLQ96LU7 910 aa13.96□□□□□ -0.17
PTCHD3-201ENST00000438700 C1orf21Q9H246 121 aa13.96□□□□□ -0.17
PTCHD3-201ENST00000438700 FAM96AQ9H5X1 160 aa13.96□□□□□ -0.17
PTCHD3-201ENST00000438700 TMEM248Q9NWD8 314 aa13.96□□□□□ -0.17
PTCHD3-201ENST00000438700 TRPM5Q9NZQ8 1165 aa13.96□□□□□ -0.17
PTCHD3-201ENST00000438700 TMEM114B3SHH9 223 aa13.96□□□□□ -0.18
PTCHD3-201ENST00000438700 CD1EP15812 388 aa13.96□□□□□ -0.18
PTCHD3-201ENST00000438700 CSRP3P50461 194 aa13.96□□□□□ -0.18
PTCHD3-201ENST00000438700 SLC10A7Q0GE19 358 aa13.96□□□□□ -0.18
PTCHD3-201ENST00000438700 ASPHQ12797 758 aa13.96□□□□□ -0.18
PTCHD3-201ENST00000438700 VEPH1Q14D04 833 aa13.96□□□□□ -0.18
PTCHD3-201ENST00000438700 LRRC23Q53EV4 343 aaPredicted RBP13.96□□□□□ -0.18
PTCHD3-201ENST00000438700 ARL13AQ5H913 290 aaPredicted RBP13.96□□□□□ -0.18
PTCHD3-201ENST00000438700 LIPMQ5VYY2 423 aa13.96□□□□□ -0.18
PTCHD3-201ENST00000438700 POTEHQ6S545 545 aa13.96□□□□□ -0.18
PTCHD3-201ENST00000438700 EPGNQ6UW88 154 aa13.96□□□□□ -0.18
PTCHD3-201ENST00000438700 RANBP10Q6VN20 620 aa13.96□□□□□ -0.18
PTCHD3-201ENST00000438700 UMODL1-AS1Q8N2C9 162 aa13.96□□□□□ -0.18
PTCHD3-201ENST00000438700 BADQ92934 168 aa13.96□□□□□ -0.18
PTCHD3-201ENST00000438700 DNAJC1Q96KC8 554 aaKnown RBP13.96□□□□□ -0.18
PTCHD3-201ENST00000438700 ILKAPQ9H0C8 392 aaPredicted RBP13.96□□□□□ -0.18
PTCHD3-201ENST00000438700 CXXC1Q9P0U4 656 aaPredicted RBP13.96□□□□□ -0.18
PTCHD3-201ENST00000438700 PACSIN3Q9UKS6 424 aa13.96□□□□□ -0.18
PTCHD3-201ENST00000438700 PCDHGB4Q9UN71 923 aa13.96□□□□□ -0.18
PTCHD3-201ENST00000438700 ACOT9Q9Y305 439 aa13.96□□□□□ -0.18
PTCHD3-201ENST00000438700 PCDHGB5Q9Y5G0 923 aa13.96□□□□□ -0.18
PTCHD3-201ENST00000438700 ANAPC1Q9H1A4 1944 aa13.96□□□□□ -0.18
PTCHD3-201ENST00000438700 CARNS1A5YM72 827 aa13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 PIGNO95427 931 aa13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 FGBP02675 491 aa13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 HSPA1AP0DMV8 641 aaKnown RBP13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 HSPA1BP0DMV9 641 aaKnown RBP13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 STMN1P16949 149 aa13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 EN2P19622 333 aaPredicted RBP13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 EPHA3P29320 983 aa13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 HADHAP40939 763 aa13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 CD86P42081 329 aa13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 RAB10P61026 200 aa13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 DYNC1I2Q13409 638 aaKnown RBP13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 UGP2Q16851 508 aa13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 C6orf163Q5TEZ5 329 aa13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 LRRC8EQ6NSJ5 796 aa13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 FRMD7Q6ZUT3 714 aa13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 PDSS2Q86YH6 399 aa13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 CNTN4Q8IWV2 1026 aa13.95□□□□□ -0.18
PTCHD3-201ENST00000438700 FIBCD1Q8N539 461 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms