RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 TTC34A8MYJ7 566 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 E7ESA3 106 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 SPECC1L-ADORA2AF8WAN1 911 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 K7EQS6 105 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 DYNC1I1O14576 645 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 ALOX15BO15296 676 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 PSMD3O43242 534 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 USP12O75317 370 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 PPFIA2O75334 1257 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 BANF1O75531 89 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 KAT7O95251 611 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 ASLP04424 464 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 ATP5BP06576 529 aaKnown RBP7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 SRPRAP08240 638 aaKnown RBP7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 HSPA9P38646 679 aaKnown RBP7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 GRIA2P42262 883 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 MAGEA3P43357 314 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 CSNK1DP48730 415 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 LMAN1P49257 510 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 SCNN1BP51168 640 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 GEMP55040 296 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 RHOAP61586 193 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 MPP3Q13368 585 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 MTM1Q13496 603 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 TDGQ13569 410 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 EIF4HQ15056 248 aaKnown RBP7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 DLG2Q15700 870 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 UBAP2Q5T6F2 1119 aaKnown RBP7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 EMC10Q5UCC4 262 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 C22orf39Q6P5X5 142 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 LRRC8BQ6P9F7 803 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 EMBQ6PCB8 327 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 NCEH1Q6PIU2 408 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 TXNDC11Q6PKC3 985 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 RANBP10Q6VN20 620 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 KDELC2Q7Z4H8 507 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 TMC3Q7Z5M5 1100 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 SRLQ86TD4 932 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 IGDCC3Q8IVU1 814 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 ADHFE1Q8IWW8 467 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 IPMKQ8NFU5 416 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 OR52K1Q8NGK4 314 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 OR2A12Q8NGT7 310 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 DNASE1L2Q92874 299 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 GTPBP3Q969Y2 492 aaKnown RBP7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 ISG20Q96AZ6 181 aaKnown RBP7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 SERPINB12Q96P63 405 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 PPP1R2P1Q96PQ5 205 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 TRIB3Q96RU7 358 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 P2RY13Q9BPV8 354 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 APOL2Q9BQE5 337 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 WDR83Q9BRX9 315 aaKnown RBP7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 FICDQ9BVA6 458 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 TRIM55Q9BYV6 548 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 FOXP3Q9BZS1 431 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 TM6SF2Q9BZW4 377 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 CIPCQ9C0C6 399 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 MTG2Q9H4K7 406 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 LRRC40Q9H9A6 602 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 CASS4Q9NQ75 786 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 SLC2A4RGQ9NR83 387 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 HEBP1Q9NRV9 189 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 VPS45Q9NRW7 570 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 PIH1D1Q9NWS0 290 aaKnown RBP7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 MTRF1LQ9UGC7 380 aaKnown RBP7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 PRKAG3Q9UGI9 489 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 SLC25A13Q9UJS0 675 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 CYP8B1Q9UNU6 501 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 FAM50BQ9Y247 325 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 PRRC2BQ5JSZ5 2229 aaKnown RBP7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 DENND4AQ7Z401 1863 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 J3QW42 95 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 KLF4O43474 513 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 GFRA3O60609 400 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 SIN3BO75182 1162 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 ERLIN1O75477 346 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 GSRP00390 522 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 PRLP01236 227 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 EPOP01588 193 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 APODP05090 189 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 SERPINF2P08697 491 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 ATXN1LP0C7T5 689 aaKnown RBP7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 SRFP11831 508 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 MLNP12872 115 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 TPH1P17752 444 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 GKP32189 559 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 MAGEA4P43358 317 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 CHRNA4P43681 627 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 ARL4CP56559 192 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 AP1S1P61966 158 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 ZP2Q05996 745 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 CDK18Q07002 472 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 TRAF2Q12933 501 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 PDIA2Q13087 525 aaKnown RBP7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 MSLNQ13421 630 aaPredicted RBP7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 MPP2Q14168 576 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 ZNF234Q14588 700 aa7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 FASTKD3Q14CZ7 662 aaKnown RBP7.09□□□□□ -1.27
LSM3P3-201ENST00000436601 LAPTM4AQ15012 233 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms