RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 PPP1R10Q96QC0 940 aaKnown RBP12.19□□□□□ -0.46
UBE3B-203ENST00000434735 GMLQ99445 158 aa12.19□□□□□ -0.46
UBE3B-203ENST00000434735 CCT7Q99832 543 aa12.19□□□□□ -0.46
UBE3B-203ENST00000434735 IRX2Q9BZI1 471 aaPredicted RBP12.19□□□□□ -0.46
UBE3B-203ENST00000434735 KCNE2Q9Y6J6 123 aa12.19□□□□□ -0.46
UBE3B-203ENST00000434735 H3BNH8 94 aa12.19□□□□□ -0.46
UBE3B-203ENST00000434735 LEFTY2O00292 366 aa12.19□□□□□ -0.46
UBE3B-203ENST00000434735 SERPINB3P29508 390 aa12.19□□□□□ -0.46
UBE3B-203ENST00000434735 SGCBQ16585 318 aa12.19□□□□□ -0.46
UBE3B-203ENST00000434735 PAGE2Q7Z2X7 111 aa12.19□□□□□ -0.46
UBE3B-203ENST00000434735 TXNDC5Q8NBS9 432 aaKnown RBP12.19□□□□□ -0.46
UBE3B-203ENST00000434735 ASZ1Q8WWH4 475 aa12.19□□□□□ -0.46
UBE3B-203ENST00000434735 LRRC1Q9BTT6 524 aa12.19□□□□□ -0.46
UBE3B-203ENST00000434735 OSBPL1AQ9BXW6 950 aa12.19□□□□□ -0.46
UBE3B-203ENST00000434735 GSDMCQ9BYG8 508 aa12.19□□□□□ -0.46
UBE3B-203ENST00000434735 ILKAPQ9H0C8 392 aaPredicted RBP12.19□□□□□ -0.46
UBE3B-203ENST00000434735 INTS10Q9NVR2 710 aaKnown RBP12.19□□□□□ -0.46
UBE3B-203ENST00000434735 COPS7AQ9UBW8 275 aa12.19□□□□□ -0.46
UBE3B-203ENST00000434735 ALBP02768 609 aa12.19□□□□□ -0.46
UBE3B-203ENST00000434735 PRKCGP05129 697 aa12.19□□□□□ -0.46
UBE3B-203ENST00000434735 VIPR2P41587 438 aa12.19□□□□□ -0.46
UBE3B-203ENST00000434735 CXCR3P49682 368 aa12.19□□□□□ -0.46
UBE3B-203ENST00000434735 LRRC49Q8IUZ0 686 aa12.19□□□□□ -0.46
UBE3B-203ENST00000434735 OR56A4Q8NGH8 313 aa12.19□□□□□ -0.46
UBE3B-203ENST00000434735 SEMA4DQ92854 862 aa12.19□□□□□ -0.46
UBE3B-203ENST00000434735 NUS1Q96E22 293 aa12.19□□□□□ -0.46
UBE3B-203ENST00000434735 PRR11Q96HE9 360 aaPredicted RBP12.19□□□□□ -0.46
UBE3B-203ENST00000434735 FUBP3Q96I24 572 aaKnown RBP eCLIP12.19□□□□□ -0.46
UBE3B-203ENST00000434735 VCPIP1Q96JH7 1222 aa12.19□□□□□ -0.46
UBE3B-203ENST00000434735 SUSD3Q96L08 255 aa12.19□□□□□ -0.46
UBE3B-203ENST00000434735 OR2AG1Q9H205 316 aa12.19□□□□□ -0.46
UBE3B-203ENST00000434735 PIF1Q9H611 641 aa12.19□□□□□ -0.46
UBE3B-203ENST00000434735 AGO3Q9H9G7 860 aaKnown RBP12.19□□□□□ -0.46
UBE3B-203ENST00000434735 MID1IP1Q9NPA3 183 aa12.19□□□□□ -0.46
UBE3B-203ENST00000434735 CDH7Q9ULB5 785 aa12.19□□□□□ -0.46
UBE3B-203ENST00000434735 PARP4Q9UKK3 1724 aaKnown RBP12.19□□□□□ -0.46
UBE3B-203ENST00000434735 C10orf71Q711Q0 1435 aa12.19□□□□□ -0.46
UBE3B-203ENST00000434735 HNRNPA1P09651 372 aaKnown RBP eCLIP12.19□□□□□ -0.46
UBE3B-203ENST00000434735 HNF1BP35680 557 aa12.19□□□□□ -0.46
UBE3B-203ENST00000434735 DYNC1I2Q13409 638 aaKnown RBP12.19□□□□□ -0.46
UBE3B-203ENST00000434735 CARD16Q5EG05 197 aa12.19□□□□□ -0.46
UBE3B-203ENST00000434735 ARSJQ5FYB0 599 aaPredicted RBP12.19□□□□□ -0.46
UBE3B-203ENST00000434735 HECTD2Q5U5R9 776 aa12.19□□□□□ -0.46
UBE3B-203ENST00000434735 LRRC46Q96FV0 321 aa12.19□□□□□ -0.46
UBE3B-203ENST00000434735 A0A1W2PQ67 120 aa12.19□□□□□ -0.46
UBE3B-203ENST00000434735 GLRA3O75311 464 aa12.19□□□□□ -0.46
UBE3B-203ENST00000434735 PIK3CGP48736 1102 aa12.19□□□□□ -0.46
UBE3B-203ENST00000434735 RPS24P62847 133 aaKnown RBP12.19□□□□□ -0.46
UBE3B-203ENST00000434735 AUHQ13825 339 aaKnown RBP12.19□□□□□ -0.46
UBE3B-203ENST00000434735 RNF19BQ6ZMZ0 732 aa12.19□□□□□ -0.46
UBE3B-203ENST00000434735 R3HCC1LQ7Z5L2 792 aaKnown RBP12.19□□□□□ -0.46
UBE3B-203ENST00000434735 FAM20CQ8IXL6 584 aa12.19□□□□□ -0.46
UBE3B-203ENST00000434735 RBFAQ8N0V3 343 aa12.19□□□□□ -0.46
UBE3B-203ENST00000434735 HAPLN3Q96S86 360 aa12.19□□□□□ -0.46
UBE3B-203ENST00000434735 NELL2Q99435 816 aa12.19□□□□□ -0.46
UBE3B-203ENST00000434735 PRMT1Q99873 361 aaKnown RBP12.19□□□□□ -0.46
UBE3B-203ENST00000434735 SOX13Q9UN79 622 aa12.19□□□□□ -0.46
UBE3B-203ENST00000434735 MTO1Q9Y2Z2 717 aaKnown RBP12.19□□□□□ -0.46
UBE3B-203ENST00000434735 PITPNM1O00562 1244 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 MUSKO15146 869 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 GUCY1A3Q02108 690 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 SLC20A2Q08357 652 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 ACAP1Q15027 740 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 TCEAL5Q5H9L2 206 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 CRTC1Q6UUV9 634 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 DNAJC14Q6Y2X3 702 aaPredicted RBP12.18□□□□□ -0.46
UBE3B-203ENST00000434735 ZNF280BQ86YH2 543 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 OXR1Q8N573 874 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 FNDC5Q8NAU1 212 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 MOSPD2Q8NHP6 518 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 MFSD14AQ96MC6 490 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 SLC39A8Q9C0K1 460 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 POLR1BQ9H9Y6 1135 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 SEMA4BQ9NPR2 832 aaPredicted RBP12.18□□□□□ -0.46
UBE3B-203ENST00000434735 MRTO4Q9UKD2 239 aaKnown RBP12.18□□□□□ -0.46
UBE3B-203ENST00000434735 KCNU1A8MYU2 1149 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 FFAR3O14843 346 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 GPR42O15529 346 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 LYPLA2O95372 231 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 C4BPBP20851 252 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 NUDT2P50583 147 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 ZACNQ401N2 412 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 ZDHHC20Q5W0Z9 365 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 HGSNATQ68CP4 663 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 TMEM220Q6QAJ8 160 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 PSTKQ8IV42 348 aaKnown RBP12.18□□□□□ -0.46
UBE3B-203ENST00000434735 RUBCNQ92622 972 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 HHIPQ96QV1 700 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 DCDC2Q9UHG0 476 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 LOC100653049A0A140TA62 436 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 KRT34O76011 436 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 DEFB103AP81534 67 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 NCF4Q15080 339 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 SLC25A52Q3SY17 297 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 MACC1Q6ZN28 852 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 LRRC74BQ6ZQY2 392 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 CENPLQ8N0S6 344 aaPredicted RBP12.18□□□□□ -0.46
UBE3B-203ENST00000434735 CYP4Z2PQ8N1L4 340 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 ZFP28Q8NHY6 868 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 GFM2Q969S9 779 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms