RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 RETREG1Q9H6L5 497 aa14.34□□□□□ -0.11
SMARCE1-205ENST00000431889 FGF22Q9HCT0 170 aa14.34□□□□□ -0.11
SMARCE1-205ENST00000431889 ETNK2Q9NVF9 386 aa14.34□□□□□ -0.11
SMARCE1-205ENST00000431889 CXorf51AA0A1B0GTR3 108 aa14.33□□□□□ -0.12
SMARCE1-205ENST00000431889 A0A1W2PQM1 296 aa14.33□□□□□ -0.12
SMARCE1-205ENST00000431889 ARHGAP42A6NI28 874 aa14.33□□□□□ -0.12
SMARCE1-205ENST00000431889 B4DGG1 531 aa14.33□□□□□ -0.12
SMARCE1-205ENST00000431889 DXOO77932 396 aaKnown RBP14.33□□□□□ -0.12
SMARCE1-205ENST00000431889 FTLP02792 175 aaPredicted RBP14.33□□□□□ -0.12
SMARCE1-205ENST00000431889 ANP32AP39687 249 aaKnown RBP14.33□□□□□ -0.12
SMARCE1-205ENST00000431889 NDST2P52849 883 aa14.33□□□□□ -0.12
SMARCE1-205ENST00000431889 ERVPABLB-1P60509 514 aa14.33□□□□□ -0.12
SMARCE1-205ENST00000431889 SLC10A7Q0GE19 358 aa14.33□□□□□ -0.12
SMARCE1-205ENST00000431889 ELOCQ15369 112 aa14.33□□□□□ -0.12
SMARCE1-205ENST00000431889 TGIF1Q15583 401 aa14.33□□□□□ -0.12
SMARCE1-205ENST00000431889 ZSCAN30Q86W11 494 aa14.33□□□□□ -0.12
SMARCE1-205ENST00000431889 JAMLQ86YT9 394 aa14.33□□□□□ -0.12
SMARCE1-205ENST00000431889 LSMEM2Q8N112 164 aa14.33□□□□□ -0.12
SMARCE1-205ENST00000431889 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.33□□□□□ -0.12
SMARCE1-205ENST00000431889 ARL10Q8N8L6 244 aa14.33□□□□□ -0.12
SMARCE1-205ENST00000431889 PTCD2Q8WV60 388 aaKnown RBP14.33□□□□□ -0.12
SMARCE1-205ENST00000431889 HSPH1Q92598 858 aa14.33□□□□□ -0.12
SMARCE1-205ENST00000431889 BTBD6Q96KE9 485 aa14.33□□□□□ -0.12
SMARCE1-205ENST00000431889 SMIM14Q96QK8 99 aa14.33□□□□□ -0.12
SMARCE1-205ENST00000431889 TMEM168Q9H0V1 697 aa14.33□□□□□ -0.12
SMARCE1-205ENST00000431889 ZWILCHQ9H900 591 aa14.33□□□□□ -0.12
SMARCE1-205ENST00000431889 PARVAQ9NVD7 372 aa14.33□□□□□ -0.12
SMARCE1-205ENST00000431889 CWC15Q9P013 229 aaKnown RBP14.33□□□□□ -0.12
SMARCE1-205ENST00000431889 CNOT8Q9UFF9 292 aaKnown RBP14.33□□□□□ -0.12
SMARCE1-205ENST00000431889 PCDHGC4Q9Y5F7 938 aa14.33□□□□□ -0.12
SMARCE1-205ENST00000431889 TEX51A0A1B0GUA7 166 aa14.32□□□□□ -0.12
SMARCE1-205ENST00000431889 TSPAN11A1L157 253 aa14.32□□□□□ -0.12
SMARCE1-205ENST00000431889 LRRC10BA6NIK2 292 aa14.32□□□□□ -0.12
SMARCE1-205ENST00000431889 DDX3XO00571 662 aaKnown RBP eCLIP14.32□□□□□ -0.123e-10■■■■□ 24
SMARCE1-205ENST00000431889 TNFP01375 233 aa14.32□□□□□ -0.12
SMARCE1-205ENST00000431889 ELFN1P0C7U0 828 aa14.32□□□□□ -0.12
SMARCE1-205ENST00000431889 ITIH1P19827 911 aa14.32□□□□□ -0.12
SMARCE1-205ENST00000431889 AMPD1P23109 780 aa14.32□□□□□ -0.12
SMARCE1-205ENST00000431889 IL1R2P27930 398 aa14.32□□□□□ -0.12
SMARCE1-205ENST00000431889 HTR1BP28222 390 aa14.32□□□□□ -0.12
SMARCE1-205ENST00000431889 SERPINA4P29622 427 aa14.32□□□□□ -0.12
SMARCE1-205ENST00000431889 MAXP61244 160 aa14.32□□□□□ -0.12
SMARCE1-205ENST00000431889 BCL2L1Q07817 233 aa14.32□□□□□ -0.12
SMARCE1-205ENST00000431889 ACOX1Q15067 660 aa14.32□□□□□ -0.12
SMARCE1-205ENST00000431889 FAM182AQ5T1J6 154 aa14.32□□□□□ -0.12
SMARCE1-205ENST00000431889 PLEKHA7Q6IQ23 1121 aa14.32□□□□□ -0.12
SMARCE1-205ENST00000431889 TAF8Q7Z7C8 310 aa14.32□□□□□ -0.12
SMARCE1-205ENST00000431889 FAM46DQ8NEK8 389 aa14.32□□□□□ -0.12
SMARCE1-205ENST00000431889 ZNF653Q96CK0 615 aa14.32□□□□□ -0.12
SMARCE1-205ENST00000431889 WDR92Q96MX6 357 aa14.32□□□□□ -0.12
SMARCE1-205ENST00000431889 NAP1L5Q96NT1 182 aaPredicted RBP14.32□□□□□ -0.12
SMARCE1-205ENST00000431889 ATP13A3Q9H7F0 1226 aa14.32□□□□□ -0.12
SMARCE1-205ENST00000431889 CYP4F12Q9HCS2 524 aa14.32□□□□□ -0.12
SMARCE1-205ENST00000431889 NCKIPSDQ9NZQ3 722 aa14.32□□□□□ -0.12
SMARCE1-205ENST00000431889 TMEM63CQ9P1W3 806 aa14.32□□□□□ -0.12
SMARCE1-205ENST00000431889 GOLGA6CA6NDK9 693 aa14.31□□□□□ -0.12
SMARCE1-205ENST00000431889 GOLGA6BA6NDN3 693 aa14.31□□□□□ -0.12
SMARCE1-205ENST00000431889 TMEM191CA6NGB0 347 aa14.31□□□□□ -0.12
SMARCE1-205ENST00000431889 PRPSAP2O60256 369 aa14.31□□□□□ -0.12
SMARCE1-205ENST00000431889 GOLGA6DP0CG33 693 aa14.31□□□□□ -0.12
SMARCE1-205ENST00000431889 CFHR1Q03591 330 aa14.31□□□□□ -0.12
SMARCE1-205ENST00000431889 CLN3Q13286 438 aa14.31□□□□□ -0.12
SMARCE1-205ENST00000431889 TXNRD3NBQ6F5E7 133 aa14.31□□□□□ -0.12
SMARCE1-205ENST00000431889 BRAT1Q6PJG6 821 aa14.31□□□□□ -0.12
SMARCE1-205ENST00000431889 LIPIQ6XZB0 460 aa14.31□□□□□ -0.12
SMARCE1-205ENST00000431889 TMPRSS9Q7Z410 1059 aa14.31□□□□□ -0.12
SMARCE1-205ENST00000431889 PGBD5Q8N414 524 aa14.31□□□□□ -0.12
SMARCE1-205ENST00000431889 BOD1L1Q8NFC6 3051 aa14.31□□□□□ -0.12
SMARCE1-205ENST00000431889 WDR36Q8NI36 951 aaKnown RBP14.31□□□□□ -0.12
SMARCE1-205ENST00000431889 LRRN4Q8WUT4 740 aa14.31□□□□□ -0.12
SMARCE1-205ENST00000431889 NAT6Q93015 286 aa14.31□□□□□ -0.12
SMARCE1-205ENST00000431889 ZNF641Q96N77 438 aaPredicted RBP14.31□□□□□ -0.12
SMARCE1-205ENST00000431889 GBP4Q96PP9 640 aa14.31□□□□□ -0.12
SMARCE1-205ENST00000431889 GFM1Q96RP9 751 aaKnown RBP14.31□□□□□ -0.12
SMARCE1-205ENST00000431889 RTN4Q9NQC3 1192 aaKnown RBP14.31□□□□□ -0.12
SMARCE1-205ENST00000431889 GOLGA6AQ9NYA3 693 aa14.31□□□□□ -0.12
SMARCE1-205ENST00000431889 UNC13CQ8NB66 2214 aa14.31□□□□□ -0.12
SMARCE1-205ENST00000431889 NTN3O00634 580 aaPredicted RBP14.3□□□□□ -0.12
SMARCE1-205ENST00000431889 LRCH4O75427 683 aa14.3□□□□□ -0.12
SMARCE1-205ENST00000431889 RNF8O76064 485 aa14.3□□□□□ -0.12
SMARCE1-205ENST00000431889 ALPIP09923 528 aa14.3□□□□□ -0.12
SMARCE1-205ENST00000431889 DESP17661 470 aa14.3□□□□□ -0.12
SMARCE1-205ENST00000431889 PEX5P50542 639 aa14.3□□□□□ -0.12
SMARCE1-205ENST00000431889 BLKP51451 505 aa14.3□□□□□ -0.12
SMARCE1-205ENST00000431889 AIF1P55008 147 aa14.3□□□□□ -0.12
SMARCE1-205ENST00000431889 MAZP56270 477 aaKnown RBP14.3□□□□□ -0.12
SMARCE1-205ENST00000431889 LBRQ14739 615 aaKnown RBP14.3□□□□□ -0.12
SMARCE1-205ENST00000431889 CCDC183Q5T5S1 534 aa14.3□□□□□ -0.12
SMARCE1-205ENST00000431889 AFMIDQ63HM1 303 aa14.3□□□□□ -0.12
SMARCE1-205ENST00000431889 RFLNAQ6ZTI6 216 aa14.3□□□□□ -0.12
SMARCE1-205ENST00000431889 GKN2Q86XP6 184 aa14.3□□□□□ -0.12
SMARCE1-205ENST00000431889 FSTL5Q8N475 847 aaPredicted RBP14.3□□□□□ -0.12
SMARCE1-205ENST00000431889 FBXO39Q8N4B4 442 aa14.3□□□□□ -0.12
SMARCE1-205ENST00000431889 OR56A4Q8NGH8 313 aa14.3□□□□□ -0.12
SMARCE1-205ENST00000431889 SCG3Q8WXD2 468 aaKnown RBP14.3□□□□□ -0.12
SMARCE1-205ENST00000431889 DPEP2Q9H4A9 486 aa14.3□□□□□ -0.12
SMARCE1-205ENST00000431889 B4GALT6Q9UBX8 382 aa14.3□□□□□ -0.12
SMARCE1-205ENST00000431889 PISDQ9UG56 409 aa14.3□□□□□ -0.12
SMARCE1-205ENST00000431889 RNF215Q9Y6U7 377 aa14.3□□□□□ -0.12
SMARCE1-205ENST00000431889 CFAP46Q8IYW2 2715 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms