RNA–Protein interactions for RNA: ENST00000431473.3

RIMKLA-202, Transcript of ribosomal modification protein rimK like family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIMKLA, Length 8,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLA-202ENST00000431473 ADRB2P07550 413 aa11.77□□□□□ -0.53
RIMKLA-202ENST00000431473 TTPAP49638 278 aa11.77□□□□□ -0.53
RIMKLA-202ENST00000431473 RPS6KA3P51812 740 aa11.77□□□□□ -0.53
RIMKLA-202ENST00000431473 ATN1P54259 1190 aaPredicted RBP11.77□□□□□ -0.53
RIMKLA-202ENST00000431473 MAXP61244 160 aa11.77□□□□□ -0.53
RIMKLA-202ENST00000431473 PFKPQ01813 784 aa11.77□□□□□ -0.53
RIMKLA-202ENST00000431473 NEK5Q6P3R8 708 aa11.77□□□□□ -0.53
RIMKLA-202ENST00000431473 PLEKHH3Q7Z736 793 aa11.77□□□□□ -0.53
RIMKLA-202ENST00000431473 COPS4Q9BT78 406 aa11.77□□□□□ -0.53
RIMKLA-202ENST00000431473 ABCC13Q9NSE7 274 aa11.77□□□□□ -0.53
RIMKLA-202ENST00000431473 MARCH2Q9P0N8 246 aa11.77□□□□□ -0.53
RIMKLA-202ENST00000431473 KPNA3O00505 521 aaPredicted RBP11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 AREL1O15033 823 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 S100A6P06703 90 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 AQP1P29972 269 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 BCAP31P51572 246 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 PNPT1Q8TCS8 783 aaKnown RBP11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 CD101Q93033 1021 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 GPC6Q9Y625 555 aaPredicted RBP11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 PMF1-BGLAPU3KQ54 211 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 CEMIPQ8WUJ3 1361 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 A0A0J9YYE9 177 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 CASKO14936 926 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 ANXA5P08758 320 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 CCNYL3P0C7X3 344 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 NR4A1P22736 598 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 OMPP47874 163 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 HUNKP57058 714 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 CBX3Q13185 183 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 SNRNP25Q9BV90 132 aaKnown RBP11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 FNDC11Q9BVV2 318 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 HDAC3O15379 428 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 CCNKO75909 580 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 SREBF2Q12772 1141 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 CXorf57Q6NSI4 855 aaKnown RBP11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 CMC1Q7Z7K0 106 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 IFNLR1Q8IU57 520 aaPredicted RBP11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 FBXL16Q8N461 479 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 CLHC1Q8NHS4 586 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 RLN1P04808 185 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 NOS2P35228 1153 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 ITGA7Q13683 1181 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 INSCQ1MX18 579 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 FAM171BQ6P995 826 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 AGBL3Q8NEM8 1001 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 EMID1Q96A84 441 aaPredicted RBP11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 RAD51AP1Q96B01 352 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 ITCHQ96J02 903 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 ABCB9Q9NP78 766 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 TMCO1Q9UM00 188 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 NRXN1Q9ULB1 1477 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 WFS1O76024 890 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 SHMT1P34896 483 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 RALGPS2Q86X27 583 aaPredicted RBP11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 CLIP4Q8N3C7 705 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 WNT8BQ93098 351 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 ULBP1Q9BZM6 244 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 ZNF24P17028 368 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 DDR1Q08345 913 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 GALNT18Q6P9A2 607 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 SLC34A3Q8N130 599 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 NAT14Q8WUY8 206 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 GFM1Q96RP9 751 aaKnown RBP11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 TNKS2Q9H2K2 1166 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 XPR1Q9UBH6 696 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 CLUHO75153 1309 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 NPEPPSL1A6NEC2 478 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 MARSP56192 900 aaKnown RBP11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 CYP2A13Q16696 494 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 ERICH5Q6P6B1 374 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 PHF12Q96QT6 1004 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 SLC35C2Q9NQQ7 365 aa11.76□□□□□ -0.53
RIMKLA-202ENST00000431473 RPS12P25398 132 aaKnown RBP11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 PEX6Q13608 980 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 RETSATQ6NUM9 610 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 C1orf186Q6ZWK4 172 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 BTNL10A8MVZ5 291 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 SUV39H1O43463 412 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 NOS1APO75052 506 aaPredicted RBP11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 TGFB3P10600 412 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 POLR2EP19388 210 aaKnown RBP11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 IRF8Q02556 426 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 WSCD1Q658N2 575 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 DENND1CQ8IV53 801 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 LINGO1Q96FE5 620 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 EBNA1BP2Q99848 306 aaKnown RBP11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 MAT2BQ9NZL9 334 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 hCG_1818297A0A087WSY0 165 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 SIN3BO75182 1162 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 KLRC2P26717 231 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 SERPINA4P29622 427 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 TAS2R40P59535 323 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 ADAM17P78536 824 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 FMO1Q01740 532 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 CPSF6Q16630 551 aaKnown RBP eCLIP11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 CLNKQ7Z7G1 428 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 ACMSDQ8TDX5 336 aa11.75□□□□□ -0.53
RIMKLA-202ENST00000431473 PPP1R13LQ8WUF5 828 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms