RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 GALNT15Q8N3T1 639 aa12.58□□□□□ -0.4
SMPD4-204ENST00000430682 ATPAF2Q8N5M1 289 aa12.58□□□□□ -0.4
SMPD4-204ENST00000430682 TEX26Q8N6G2 289 aa12.58□□□□□ -0.4
SMPD4-204ENST00000430682 LMX1AQ8TE12 382 aa12.58□□□□□ -0.4
SMPD4-204ENST00000430682 CTNNBL1Q8WYA6 563 aaPredicted RBP12.58□□□□□ -0.4
SMPD4-204ENST00000430682 FAF2Q96CS3 445 aa12.58□□□□□ -0.4
SMPD4-204ENST00000430682 SMG1Q96Q15 3661 aaKnown RBP12.58□□□□□ -0.4
SMPD4-204ENST00000430682 NUDCD1Q96RS6 583 aa12.58□□□□□ -0.4
SMPD4-204ENST00000430682 MGME1Q9BQP7 344 aa12.58□□□□□ -0.4
SMPD4-204ENST00000430682 APOOQ9BUR5 198 aa12.58□□□□□ -0.4
SMPD4-204ENST00000430682 LRRC61Q9BV99 259 aa12.58□□□□□ -0.4
SMPD4-204ENST00000430682 NLGN3Q9NZ94 848 aa12.58□□□□□ -0.4
SMPD4-204ENST00000430682 RCOR3Q9P2K3 495 aaPredicted RBP12.58□□□□□ -0.4
SMPD4-204ENST00000430682 UVRAGQ9P2Y5 699 aa12.58□□□□□ -0.4
SMPD4-204ENST00000430682 PTPRQQ9UMZ3 2332 aa12.58□□□□□ -0.4
SMPD4-204ENST00000430682 TFR2Q9UP52 801 aa12.58□□□□□ -0.4
SMPD4-204ENST00000430682 OR1A2Q9Y585 309 aa12.58□□□□□ -0.4
SMPD4-204ENST00000430682 TMEM202A6NGA9 273 aa12.57□□□□□ -0.4
SMPD4-204ENST00000430682 C3orf70A6NLC5 250 aaPredicted RBP12.57□□□□□ -0.4
SMPD4-204ENST00000430682 AKR1B10O60218 316 aa12.57□□□□□ -0.4
SMPD4-204ENST00000430682 LZTS3O60299 673 aaPredicted RBP12.57□□□□□ -0.4
SMPD4-204ENST00000430682 PDHA1P08559 390 aa12.57□□□□□ -0.4
SMPD4-204ENST00000430682 CKMT1AP12532 417 aa12.57□□□□□ -0.4
SMPD4-204ENST00000430682 MMP13P45452 471 aa12.57□□□□□ -0.4
SMPD4-204ENST00000430682 THOP1P52888 689 aa12.57□□□□□ -0.4
SMPD4-204ENST00000430682 GALNT2Q10471 571 aa12.57□□□□□ -0.4
SMPD4-204ENST00000430682 TRIM14Q14142 442 aa12.57□□□□□ -0.4
SMPD4-204ENST00000430682 ZNF235Q14590 738 aa12.57□□□□□ -0.4
SMPD4-204ENST00000430682 CNGA3Q16281 694 aa12.57□□□□□ -0.4
SMPD4-204ENST00000430682 HADHQ16836 314 aaKnown RBP12.57□□□□□ -0.4
SMPD4-204ENST00000430682 ALG11Q2TAA5 492 aa12.57□□□□□ -0.4
SMPD4-204ENST00000430682 PRRT3Q5FWE3 981 aa12.57□□□□□ -0.4
SMPD4-204ENST00000430682 ERAP2Q6P179 960 aa12.57□□□□□ -0.4
SMPD4-204ENST00000430682 MACC1Q6ZN28 852 aa12.57□□□□□ -0.4
SMPD4-204ENST00000430682 RFLNAQ6ZTI6 216 aa12.57□□□□□ -0.4
SMPD4-204ENST00000430682 TC2NQ8N9U0 490 aa12.57□□□□□ -0.4
SMPD4-204ENST00000430682 FAM181AQ8N9Y4 354 aa12.57□□□□□ -0.4
SMPD4-204ENST00000430682 KCTD6Q8NC69 237 aa12.57□□□□□ -0.4
SMPD4-204ENST00000430682 RFFLQ8WZ73 363 aa12.57□□□□□ -0.4
SMPD4-204ENST00000430682 SPOCK2Q92563 424 aa12.57□□□□□ -0.4
SMPD4-204ENST00000430682 COQ10AQ96MF6 247 aa12.57□□□□□ -0.4
SMPD4-204ENST00000430682 LGR4Q9BXB1 951 aa12.57□□□□□ -0.4
SMPD4-204ENST00000430682 CCDC86Q9H6F5 360 aaKnown RBP12.57□□□□□ -0.4
SMPD4-204ENST00000430682 NT5MQ9NPB1 228 aa12.57□□□□□ -0.4
SMPD4-204ENST00000430682 HYOU1Q9Y4L1 999 aa12.57□□□□□ -0.4
SMPD4-204ENST00000430682 SCN8AQ9UQD0 1980 aa12.56□□□□□ -0.4
SMPD4-204ENST00000430682 NPIPB15A6NHN6 443 aaPredicted RBP12.56□□□□□ -0.4
SMPD4-204ENST00000430682 YY2O15391 372 aa12.56□□□□□ -0.4
SMPD4-204ENST00000430682 MTA2O94776 668 aa12.56□□□□□ -0.4
SMPD4-204ENST00000430682 PCCBP05166 539 aa12.56□□□□□ -0.4
SMPD4-204ENST00000430682 JUPP14923 745 aa12.56□□□□□ -0.4
SMPD4-204ENST00000430682 TSHRP16473 764 aa12.56□□□□□ -0.4
SMPD4-204ENST00000430682 CTPS1P17812 591 aa12.56□□□□□ -0.4
SMPD4-204ENST00000430682 LHCGRP22888 699 aa12.56□□□□□ -0.4
SMPD4-204ENST00000430682 KDELR1P24390 212 aa12.56□□□□□ -0.4
SMPD4-204ENST00000430682 GARSP41250 739 aaKnown RBP12.56□□□□□ -0.4
SMPD4-204ENST00000430682 RENBPP51606 427 aa12.56□□□□□ -0.4
SMPD4-204ENST00000430682 DAB2P98082 770 aa12.56□□□□□ -0.4
SMPD4-204ENST00000430682 DSC2Q02487 901 aa12.56□□□□□ -0.4
SMPD4-204ENST00000430682 NIPAL4Q0D2K0 466 aa12.56□□□□□ -0.4
SMPD4-204ENST00000430682 NFATC4Q14934 902 aa12.56□□□□□ -0.4
SMPD4-204ENST00000430682 PERM1Q5SV97 790 aa12.56□□□□□ -0.4
SMPD4-204ENST00000430682 CFAP58Q5T655 872 aa12.56□□□□□ -0.4
SMPD4-204ENST00000430682 MARC1Q5VT66 337 aa12.56□□□□□ -0.4
SMPD4-204ENST00000430682 GUSBP11Q6P575 273 aa12.56□□□□□ -0.4
SMPD4-204ENST00000430682 HSD11B1LQ7Z5J1 315 aa12.56□□□□□ -0.4
SMPD4-204ENST00000430682 TSPAN33Q86UF1 283 aa12.56□□□□□ -0.4
SMPD4-204ENST00000430682 HID1Q8IV36 788 aa12.56□□□□□ -0.4
SMPD4-204ENST00000430682 SFTPA2Q8IWL1 248 aa12.56□□□□□ -0.4
SMPD4-204ENST00000430682 SLC35F3Q8IY50 421 aa12.56□□□□□ -0.4
SMPD4-204ENST00000430682 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.56□□□□□ -0.4
SMPD4-204ENST00000430682 PLD5Q8N7P1 536 aa12.56□□□□□ -0.4
SMPD4-204ENST00000430682 ARRDC2Q8TBH0 407 aa12.56□□□□□ -0.4
SMPD4-204ENST00000430682 PDCD6IPQ8WUM4 868 aaKnown RBP12.56□□□□□ -0.4
SMPD4-204ENST00000430682 PTCD2Q8WV60 388 aaKnown RBP12.56□□□□□ -0.4
SMPD4-204ENST00000430682 PIH1D2Q8WWB5 315 aa12.56□□□□□ -0.4
SMPD4-204ENST00000430682 MAML1Q92585 1016 aa12.56□□□□□ -0.4
SMPD4-204ENST00000430682 SEMA3CQ99985 751 aa12.56□□□□□ -0.4
SMPD4-204ENST00000430682 ZNF670Q9BS34 389 aa12.56□□□□□ -0.4
SMPD4-204ENST00000430682 DEF6Q9H4E7 631 aa12.56□□□□□ -0.4
SMPD4-204ENST00000430682 SCUBE2Q9NQ36 999 aa12.56□□□□□ -0.4
SMPD4-204ENST00000430682 MRPL40Q9NQ50 206 aaKnown RBP12.56□□□□□ -0.4
SMPD4-204ENST00000430682 APOBEC3BQ9UH17 382 aaKnown RBP12.56□□□□□ -0.4
SMPD4-204ENST00000430682 RAXQ9Y2V3 346 aa12.56□□□□□ -0.4
SMPD4-204ENST00000430682 PCDHB1Q9Y5F3 818 aa12.56□□□□□ -0.4
SMPD4-204ENST00000430682 CSNK1G3Q9Y6M4 447 aa12.56□□□□□ -0.4
SMPD4-204ENST00000430682 KALRNO60229 2985 aa12.55□□□□□ -0.4
SMPD4-204ENST00000430682 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.55□□□□□ -0.4
SMPD4-204ENST00000430682 CFAP69A5D8W1 941 aa12.55□□□□□ -0.4
SMPD4-204ENST00000430682 MATN3O15232 486 aa12.55□□□□□ -0.4
SMPD4-204ENST00000430682 OPA1O60313 960 aa12.55□□□□□ -0.4
SMPD4-204ENST00000430682 FZD6O60353 706 aa12.55□□□□□ -0.4
SMPD4-204ENST00000430682 SOCS5O75159 536 aa12.55□□□□□ -0.4
SMPD4-204ENST00000430682 PGLSO95336 258 aa12.55□□□□□ -0.4
SMPD4-204ENST00000430682 CPP00450 1065 aa12.55□□□□□ -0.4
SMPD4-204ENST00000430682 PRLP01236 227 aa12.55□□□□□ -0.4
SMPD4-204ENST00000430682 FUCA1P04066 466 aa12.55□□□□□ -0.4
SMPD4-204ENST00000430682 HLA-DQB2P05538 268 aa12.55□□□□□ -0.4
SMPD4-204ENST00000430682 ALPIP09923 528 aa12.55□□□□□ -0.4
SMPD4-204ENST00000430682 ELFN1P0C7U0 828 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms