RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 UNKLQ9H9P5 680 aaKnown RBP7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 RC3H2Q9HBD1 1191 aaKnown RBP7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 MFHAS1Q9Y4C4 1052 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 ROBO1Q9Y6N7 1651 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 TSTD3H0UI37 97 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 DGAT1O75907 488 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 MAPTP10636 758 aaKnown RBP7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 MTHFD1P11586 935 aaKnown RBP7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 MYCLP1P12525 358 aaPredicted RBP7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 HTR7P34969 479 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 CHRNEQ04844 493 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 MGAT5Q09328 741 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 ESCO2Q56NI9 601 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 GPRC6AQ5T6X5 926 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 AGAP6Q5VW22 663 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 TCEAL4Q96EI5 215 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 AGAP4Q96P64 663 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 KLF6Q99612 283 aaPredicted RBP7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 ANKRA2Q9H9E1 313 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 KPNA5O15131 536 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 RNASEH2AO75792 299 aaKnown RBP7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 ITGALP20701 1170 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 PPIBP23284 216 aaKnown RBP7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 CRHR1P34998 444 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 PCID2Q5JVF3 399 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 GRAMD2AQ8IUY3 354 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 CFAP206Q8IYR0 622 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 PARP8Q8N3A8 854 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 RIPOR3Q96MK2 946 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 TDRD3Q9H7E2 651 aaKnown RBP7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 SAGE1Q9NXZ1 904 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 NOD1Q9Y239 953 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 CHRNB1P11230 501 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 SREBF1P36956 1147 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 PIK3CGP48736 1102 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 CEBPGP53567 150 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 HERC6Q8IVU3 1022 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 ETNPPLQ8TBG4 499 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 FAM167AQ96KS9 214 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 UFSP2Q9NUQ7 469 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 DOCK8Q8NF50 2099 aa7.56□□□□□ -1.2
SYNPO2-202ENST00000429713 CLCA1A8K7I4 914 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 PRSS44E7EML9 344 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 ANXA3P12429 323 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 CDH1P12830 882 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 RPA3P35244 121 aaPredicted RBP7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 TMEM119Q4V9L6 283 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 FNDC5Q8NAU1 212 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 AZIN2Q96A70 460 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 KCNN2Q9H2S1 579 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 ZNF334Q9HCZ1 680 aaPredicted RBP7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 GPRC5DQ9NZD1 345 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 SLC7A8Q9UHI5 535 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 SLC13A4Q9UKG4 626 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 PRR12Q9ULL5 1215 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 M0R233 179 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 MUSKO15146 869 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 NCF1P14598 390 aaPredicted RBP7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 MATN1P21941 496 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 CUL2Q13617 745 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 TXNDC5Q8NBS9 432 aaKnown RBP7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 UBASH3BQ8TF42 649 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 CRELD1Q96HD1 420 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 TASP1Q9H6P5 420 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 ADPRHL2Q9NX46 363 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 ZNF224Q9NZL3 707 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 SPATA2Q9UM82 520 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 RAP2CQ9Y3L5 183 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 MAFO75444 373 aaPredicted RBP7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 NTSR2O95665 410 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 MLNP12872 115 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 VEGFCP49767 419 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 HLCSP50747 726 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 FSTL1Q12841 308 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 SKIV2LQ15477 1246 aaKnown RBP7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 QPCTQ16769 361 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 FBXO36Q8NEA4 188 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 IFT22Q9H7X7 185 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 MRC1P22897 1456 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 PKD1L3Q7Z443 1732 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 CCRL2O00421 344 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 ITGB1P05556 798 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 PTBP1P26599 531 aaKnown RBP eCLIP7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 SLC1A6P48664 564 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 GCNT1Q02742 428 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 FADDQ13158 208 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 NFYCQ13952 458 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 ZNF404Q494X3 552 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 SLC35F1Q5T1Q4 408 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 PLA2G4FQ68DD2 849 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 SIGIRRQ6IA17 410 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 GPAT2Q6NUI2 795 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 LDHDQ86WU2 507 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 WDR49Q8IV35 697 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 DDIASQ8IXT1 998 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 NSUN6Q8TEA1 469 aaKnown RBP7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 TMEM216Q9P0N5 145 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 USP18Q9UMW8 372 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 PDE10AQ9Y233 779 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 PCDHGB6Q9Y5F9 930 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms