RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 GPR142Q7Z601 462 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 ZC3H7AQ8IWR0 971 aaKnown RBP12.84□□□□□ -0.35
LDB3-205ENST00000429277 LNX1Q8TBB1 728 aaPredicted RBP12.84□□□□□ -0.35
LDB3-205ENST00000429277 PRCCQ92733 491 aaPredicted RBP12.84□□□□□ -0.35
LDB3-205ENST00000429277 REXO5Q96IC2 774 aaKnown RBP12.84□□□□□ -0.35
LDB3-205ENST00000429277 HOPXQ9BPY8 73 aaPredicted RBP12.84□□□□□ -0.35
LDB3-205ENST00000429277 FNDC11Q9BVV2 318 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 RSL24D1Q9UHA3 163 aaKnown RBP12.84□□□□□ -0.35
LDB3-205ENST00000429277 GPSM3Q9Y4H4 160 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 NTRK1P04629 796 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 ZSCAN5DPP0CG00 497 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 BNC1Q01954 994 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 ITGADQ13349 1161 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 INTS6LQ5JSJ4 861 aaKnown RBP12.84□□□□□ -0.35
LDB3-205ENST00000429277 DUPD1Q68J44 220 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 RPTNQ6XPR3 784 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 VGLL2Q8N8G2 317 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 COL26A1Q96A83 441 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 MTFMTQ96DP5 389 aaKnown RBP12.84□□□□□ -0.35
LDB3-205ENST00000429277 RHOJQ9H4E5 214 aa12.84□□□□□ -0.35
LDB3-205ENST00000429277 MAP2K7O14733 419 aa12.83□□□□□ -0.35
LDB3-205ENST00000429277 TLR5O60602 858 aa12.83□□□□□ -0.35
LDB3-205ENST00000429277 GJB6O95452 261 aa12.83□□□□□ -0.35
LDB3-205ENST00000429277 CCNYL3P0C7X3 344 aa12.83□□□□□ -0.35
LDB3-205ENST00000429277 LAG3P18627 525 aa12.83□□□□□ -0.35
LDB3-205ENST00000429277 RHAGQ02094 409 aa12.83□□□□□ -0.35
LDB3-205ENST00000429277 BST1Q10588 318 aa12.83□□□□□ -0.35
LDB3-205ENST00000429277 TRAP1Q12931 704 aaKnown RBP12.83□□□□□ -0.35
LDB3-205ENST00000429277 ATP1A4Q13733 1029 aa12.83□□□□□ -0.35
LDB3-205ENST00000429277 ERICH5Q6P6B1 374 aa12.83□□□□□ -0.35
LDB3-205ENST00000429277 KLHL24Q6TFL4 600 aa12.83□□□□□ -0.35
LDB3-205ENST00000429277 SRFBP1Q8NEF9 429 aaKnown RBP12.83□□□□□ -0.35
LDB3-205ENST00000429277 TEX47Q8TBZ9 253 aa12.83□□□□□ -0.35
LDB3-205ENST00000429277 DCUN1D5Q9BTE7 237 aa12.83□□□□□ -0.35
LDB3-205ENST00000429277 ZNHIT2Q9UHR6 403 aa12.83□□□□□ -0.35
LDB3-205ENST00000429277 GRM6O15303 877 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 RPL4P36578 427 aaKnown RBP12.83□□□□□ -0.36
LDB3-205ENST00000429277 MIIPQ5JXC2 388 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 NPNTQ6UXI9 565 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 FUKQ8N0W3 1084 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 PPTC7Q8NI37 304 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 IRGQQ8WZA9 623 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 BTN2A3PQ96KV6 586 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 TCF12Q99081 682 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 SUCOQ9UBS9 1254 aaKnown RBP12.83□□□□□ -0.36
LDB3-205ENST00000429277 NUDT5Q9UKK9 219 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 ST3GAL5Q9UNP4 418 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 VWA7Q9Y334 891 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 CASZ1Q86V15 1759 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 KLRC4O43908 158 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 GCNT7Q6ZNI0 430 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 DHDDSQ86SQ9 333 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 ILDR1Q86SU0 546 aaPredicted RBP12.83□□□□□ -0.36
LDB3-205ENST00000429277 ADGRG2Q8IZP9 1017 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 PANX1Q96RD7 426 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 HSD17B14Q9BPX1 270 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 CYLDQ9NQC7 956 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 PNPLA3Q9NST1 481 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 EHD3Q9NZN3 535 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 PTGFRNQ9P2B2 879 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 COG5Q9UP83 839 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 TPSB2P20231 275 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 OLR1P78380 273 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 ELF3P78545 371 aaPredicted RBP12.83□□□□□ -0.36
LDB3-205ENST00000429277 TPSAB1Q15661 275 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 NOL9Q5SY16 702 aaKnown RBP12.83□□□□□ -0.36
LDB3-205ENST00000429277 CERS6Q6ZMG9 384 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 PEX5LQ8IYB4 626 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 PRELID2Q8N945 189 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 ASZ1Q8WWH4 475 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 ZBTB10Q96DT7 871 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 GTPBP1O00178 669 aaKnown RBP12.83□□□□□ -0.36
LDB3-205ENST00000429277 RFXANKO14593 260 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 B4GALT4O60513 344 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 FKTNO75072 461 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 IL1BP01584 269 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 FGBP02675 491 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 NR2F6P10588 404 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 ELP6Q0PNE2 266 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 TOMM20Q15388 145 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 ZSWIM7Q19AV6 140 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 CAPN13Q6MZZ7 669 aaPredicted RBP12.83□□□□□ -0.36
LDB3-205ENST00000429277 ANKRD23Q86SG2 305 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 KCTD4Q8WVF5 259 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 FAM105AQ9NUU6 356 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 KCTD5Q9NXV2 234 aa12.83□□□□□ -0.36
LDB3-205ENST00000429277 SAMD4AQ9UPU9 718 aaKnown RBP12.83□□□□□ -0.36
LDB3-205ENST00000429277 GOT1P17174 413 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 CDH5P33151 784 aaPredicted RBP12.82□□□□□ -0.36
LDB3-205ENST00000429277 YBEYP58557 167 aaPredicted RBP12.82□□□□□ -0.36
LDB3-205ENST00000429277 ITGB3BPQ13352 177 aaPredicted RBP12.82□□□□□ -0.36
LDB3-205ENST00000429277 MPPE1Q53F39 396 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 MARK2Q7KZI7 788 aaKnown RBP12.82□□□□□ -0.36
LDB3-205ENST00000429277 CYP4X1Q8N118 509 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 CDYL2Q8N8U2 506 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 TSPAN14Q8NG11 270 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 PPCDCQ96CD2 204 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 MYO19Q96H55 970 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 SEMA6AQ9H2E6 1030 aa12.82□□□□□ -0.36
LDB3-205ENST00000429277 DHX33Q9H6R0 707 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms