RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.41□□□□□ -1.06
CD44-208ENST00000428726 ZBBXA8MT70 800 aa8.41□□□□□ -1.06
CD44-208ENST00000428726 UPK3BL1B0FP48 263 aa8.41□□□□□ -1.06
CD44-208ENST00000428726 UPK3BL2E5RIL1 263 aa8.41□□□□□ -1.06
CD44-208ENST00000428726 PRRG1O14668 218 aa8.41□□□□□ -1.06
CD44-208ENST00000428726 KATNA1O75449 491 aa8.41□□□□□ -1.06
CD44-208ENST00000428726 PGM3O95394 542 aa8.41□□□□□ -1.06
CD44-208ENST00000428726 RPLP2P05387 115 aaKnown RBP8.41□□□□□ -1.06
CD44-208ENST00000428726 ATP5BP06576 529 aaKnown RBP8.41□□□□□ -1.06
CD44-208ENST00000428726 PRDX3P30048 256 aaKnown RBP8.41□□□□□ -1.06
CD44-208ENST00000428726 ASPHQ12797 758 aa8.41□□□□□ -1.06
CD44-208ENST00000428726 TRIM71Q2Q1W2 868 aaKnown RBP8.41□□□□□ -1.06
CD44-208ENST00000428726 GRAMD1BQ3KR37 738 aa8.41□□□□□ -1.06
CD44-208ENST00000428726 TSTD2Q5T7W7 516 aa8.41□□□□□ -1.06
CD44-208ENST00000428726 GRTP1Q5TC63 336 aa8.41□□□□□ -1.06
CD44-208ENST00000428726 TRIM67Q6ZTA4 783 aa8.41□□□□□ -1.06
CD44-208ENST00000428726 DDIASQ8IXT1 998 aa8.41□□□□□ -1.06
CD44-208ENST00000428726 PCSK9Q8NBP7 692 aaKnown RBP8.41□□□□□ -1.06
CD44-208ENST00000428726 IRGQQ8WZA9 623 aa8.41□□□□□ -1.06
CD44-208ENST00000428726 ACOX2Q99424 681 aa8.41□□□□□ -1.06
CD44-208ENST00000428726 VAT1Q99536 393 aa8.41□□□□□ -1.06
CD44-208ENST00000428726 PKMYT1Q99640 499 aa8.41□□□□□ -1.06
CD44-208ENST00000428726 SLC30A3Q99726 388 aa8.41□□□□□ -1.06
CD44-208ENST00000428726 ZYG11BQ9C0D3 744 aa8.41□□□□□ -1.06
CD44-208ENST00000428726 TCF7L2Q9NQB0 619 aa8.41□□□□□ -1.06
CD44-208ENST00000428726 MARCH5Q9NX47 278 aa8.41□□□□□ -1.06
CD44-208ENST00000428726 NCKIPSDQ9NZQ3 722 aa8.41□□□□□ -1.06
CD44-208ENST00000428726 STOML1Q9UBI4 398 aa8.41□□□□□ -1.06
CD44-208ENST00000428726 TRHDEQ9UKU6 1024 aa8.41□□□□□ -1.06
CD44-208ENST00000428726 CORO1CQ9ULV4 474 aaPredicted RBP8.41□□□□□ -1.06
CD44-208ENST00000428726 SOX13Q9UN79 622 aa8.41□□□□□ -1.06
CD44-208ENST00000428726 CCDC162PA2VCL2 907 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 M0QZQ0 153 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 INSIG1O15503 277 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 SNNO75324 88 aaPredicted RBP8.4□□□□□ -1.06
CD44-208ENST00000428726 GOT2P00505 430 aaKnown RBP8.4□□□□□ -1.06
CD44-208ENST00000428726 GALTP07902 379 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 UGT1A6P19224 532 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 UGT1A1P22309 533 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 UGT1A4P22310 534 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 UGT1A3P35503 534 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 UGT1A5P35504 534 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 VHLP40337 213 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 C1QTNF8P60827 252 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 DEFB103AP81534 67 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 ZXDBP98169 803 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 BTKQ06187 659 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 CBX2Q14781 532 aaPredicted RBP8.4□□□□□ -1.06
CD44-208ENST00000428726 SGO1Q5FBB7 561 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 ZRANB3Q5FWF4 1079 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 PCID2Q5JVF3 399 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 LHX8Q68G74 356 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 LRRC8EQ6NSJ5 796 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 MRPL10Q7Z7H8 261 aaKnown RBP8.4□□□□□ -1.06
CD44-208ENST00000428726 MON1AQ86VX9 555 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.4□□□□□ -1.06
CD44-208ENST00000428726 NAT16Q8N8M0 369 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 ZNF333Q96JL9 665 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 PHF12Q96QT6 1004 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 TUBGCP5Q96RT8 1024 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 CCDC106Q9BWC9 280 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 APOL5Q9BWW9 433 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 OSBPL2Q9H1P3 480 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 ATP13A1Q9HD20 1204 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 TAGLN3Q9UI15 199 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 IKZF3Q9UKT9 509 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 F5P12259 2224 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 MAP3K7O43318 606 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 ZNF623O75123 536 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 NIPSNAP2O75323 286 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 MTX2O75431 263 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 LINC00032P0C843 101 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 RPL10P27635 214 aaKnown RBP8.4□□□□□ -1.06
CD44-208ENST00000428726 CORO1AP31146 461 aaKnown RBP8.4□□□□□ -1.06
CD44-208ENST00000428726 CA5AP35218 305 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 SERPINH1P50454 418 aaKnown RBP8.4□□□□□ -1.06
CD44-208ENST00000428726 TLE2Q04725 743 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 TBL3Q12788 808 aaKnown RBP8.4□□□□□ -1.06
CD44-208ENST00000428726 TUBB3Q13509 450 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 FRG1Q14331 258 aaKnown RBP8.4□□□□□ -1.06
CD44-208ENST00000428726 INSCQ1MX18 579 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 FUT11Q495W5 492 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 SLC30A9Q6PML9 568 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 RFLNAQ6ZTI6 216 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.4□□□□□ -1.06
CD44-208ENST00000428726 PPFIBP2Q8ND30 876 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 OR13J1Q8NGT2 312 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 TRPC4APQ8TEL6 797 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 SIKE1Q9BRV8 207 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 C1orf50Q9BV19 199 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 TRIM62Q9BVG3 475 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 CERS4Q9HA82 394 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 BATF3Q9NR55 127 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 RGS18Q9NS28 235 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.4□□□□□ -1.06
CD44-208ENST00000428726 TCAF1Q9Y4C2 921 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 LRRC42Q9Y546 428 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 PCDHB9Q9Y5E1 797 aa8.4□□□□□ -1.06
CD44-208ENST00000428726 COCHO43405 550 aa8.4□□□□□ -1.07
CD44-208ENST00000428726 OR6B1O95007 311 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms