RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 LCA5Q86VQ0 697 aa15.26■□□□□ 0.03
ACTB-204ENST00000425660 AHI1Q8N157 1196 aa15.26■□□□□ 0.03
ACTB-204ENST00000425660 OR13C4Q8NGS5 318 aa15.26■□□□□ 0.03
ACTB-204ENST00000425660 SCG3Q8WXD2 468 aaKnown RBP15.26■□□□□ 0.03
ACTB-204ENST00000425660 SMARCD2Q92925 531 aa15.26■□□□□ 0.03
ACTB-204ENST00000425660 RPL10LQ96L21 214 aaKnown RBP15.26■□□□□ 0.03
ACTB-204ENST00000425660 TBATAQ96M53 351 aa15.26■□□□□ 0.03
ACTB-204ENST00000425660 TRPV4Q9HBA0 871 aa15.26■□□□□ 0.03
ACTB-204ENST00000425660 OBP2AQ9NY56 170 aa15.26■□□□□ 0.03
ACTB-204ENST00000425660 HACD3Q9P035 362 aa15.26■□□□□ 0.03
ACTB-204ENST00000425660 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.26■□□□□ 0.03
ACTB-204ENST00000425660 EMCNQ9ULC0 261 aa15.26■□□□□ 0.03
ACTB-204ENST00000425660 PCDHB9Q9Y5E1 797 aa15.26■□□□□ 0.03
ACTB-204ENST00000425660 C2orf81A6NN90 581 aa15.25■□□□□ 0.03
ACTB-204ENST00000425660 HOXC11O43248 304 aaPredicted RBP15.25■□□□□ 0.03
ACTB-204ENST00000425660 SNX3O60493 162 aa15.25■□□□□ 0.03
ACTB-204ENST00000425660 TOP3BO95985 862 aaKnown RBP15.25■□□□□ 0.03
ACTB-204ENST00000425660 GSRP00390 522 aa15.25■□□□□ 0.03
ACTB-204ENST00000425660 C2P06681 752 aa15.25■□□□□ 0.03
ACTB-204ENST00000425660 ABCG1P45844 678 aa15.25■□□□□ 0.03
ACTB-204ENST00000425660 STK19P49842 368 aaPredicted RBP15.25■□□□□ 0.03
ACTB-204ENST00000425660 ECT2LQ008S8 904 aa15.25■□□□□ 0.03
ACTB-204ENST00000425660 ARMC12Q5T9G4 340 aa15.25■□□□□ 0.03
ACTB-204ENST00000425660 PTAR1Q7Z6K3 402 aaPredicted RBP15.25■□□□□ 0.03
ACTB-204ENST00000425660 MFSD6LQ8IWD5 586 aa15.25■□□□□ 0.03
ACTB-204ENST00000425660 OR6P1Q8NGX9 317 aa15.25■□□□□ 0.03
ACTB-204ENST00000425660 PIH1D2Q8WWB5 315 aa15.25■□□□□ 0.03
ACTB-204ENST00000425660 CDKN2AIPNLQ96HQ2 116 aa15.25■□□□□ 0.03
ACTB-204ENST00000425660 SEC16BQ96JE7 1060 aa15.25■□□□□ 0.03
ACTB-204ENST00000425660 C19orf43Q9BQ61 176 aa15.25■□□□□ 0.03
ACTB-204ENST00000425660 CAB39LQ9H9S4 337 aa15.25■□□□□ 0.03
ACTB-204ENST00000425660 MAGEE1Q9HCI5 957 aa15.25■□□□□ 0.03
ACTB-204ENST00000425660 DUS2Q9NX74 493 aaKnown RBP15.25■□□□□ 0.03
ACTB-204ENST00000425660 SIRPGQ9P1W8 387 aa15.25■□□□□ 0.03
ACTB-204ENST00000425660 EVLQ9UI08 416 aaPredicted RBP15.25■□□□□ 0.03
ACTB-204ENST00000425660 C5orf42Q9H799 3197 aa15.25■□□□□ 0.03
ACTB-204ENST00000425660 A0A096LPK6 155 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 EBAG9O00559 213 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 BIRC5O15392 142 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 EDF1O60869 148 aaKnown RBP15.24■□□□□ 0.03
ACTB-204ENST00000425660 HAUS5O94927 633 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 GOT2P00505 430 aaKnown RBP15.24■□□□□ 0.03
ACTB-204ENST00000425660 CYP17A1P05093 508 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 SLC8A1P32418 973 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 BMP8BP34820 402 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 VIPR2P41587 438 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 VASPP50552 380 aaPredicted RBP15.24■□□□□ 0.03
ACTB-204ENST00000425660 SNRPD1P62314 119 aaKnown RBP15.24■□□□□ 0.03
ACTB-204ENST00000425660 MLLT1Q03111 559 aaPredicted RBP15.24■□□□□ 0.03
ACTB-204ENST00000425660 BCL2L1Q07817 233 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 DLG2Q15700 870 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 RARS2Q5T160 578 aaKnown RBP15.24■□□□□ 0.03
ACTB-204ENST00000425660 C22orf39Q6P5X5 142 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 CAMK1DQ8IU85 385 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 PLPP6Q8IY26 295 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 PCDH20Q8N6Y1 951 aaKnown RBP15.24■□□□□ 0.03
ACTB-204ENST00000425660 EFHBQ8N7U6 833 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 ARMC2Q8NEN0 867 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 BPIFB1Q8TDL5 484 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 PDCD6IPQ8WUM4 868 aaKnown RBP15.24■□□□□ 0.03
ACTB-204ENST00000425660 GRAMD1AQ96CP6 724 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 MYO19Q96H55 970 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 TUBGCP5Q96RT8 1024 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 PITPNM3Q9BZ71 974 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 ATP13A3Q9H7F0 1226 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 MANSC1Q9H8J5 431 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 SLC25A13Q9UJS0 675 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 SLC39A10Q9ULF5 831 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 C2orf16Q68DN1 1984 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 FAM95CA0A1B0GW59 222 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 CCDC162PA2VCL2 907 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 H7C0S8 307 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 RFXAPO00287 272 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 CCL22O00626 93 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 PLIN3O60664 434 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 S1PR4O95977 384 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 OGNP20774 298 aaKnown RBP15.24■□□□□ 0.03
ACTB-204ENST00000425660 LPOP22079 712 aaPredicted RBP15.24■□□□□ 0.03
ACTB-204ENST00000425660 CLCN5P51795 746 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 POU4F1Q01851 419 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 HYAL1Q12794 435 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 USP10Q14694 798 aaKnown RBP15.24■□□□□ 0.03
ACTB-204ENST00000425660 PTPRCAPQ14761 206 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 N4BP2L1Q5TBK1 243 aaPredicted RBP15.24■□□□□ 0.03
ACTB-204ENST00000425660 TMEM215Q68D42 235 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 MRNIPQ6NTE8 343 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 SYCE2Q6PIF2 218 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 SPATS2Q86XZ4 545 aaKnown RBP15.24■□□□□ 0.03
ACTB-204ENST00000425660 TTC30BQ8N4P2 665 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 OR6K2Q8NGY2 324 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 OR4L1Q8NH43 312 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 RAB3IL1Q8TBN0 382 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 ECHDC3Q96DC8 303 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 CPEB1Q9BZB8 566 aaKnown RBP15.24■□□□□ 0.03
ACTB-204ENST00000425660 TNKS2Q9H2K2 1166 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 NSUN3Q9H649 340 aaKnown RBP15.24■□□□□ 0.03
ACTB-204ENST00000425660 SUDS3Q9H7L9 328 aaPredicted RBP15.24■□□□□ 0.03
ACTB-204ENST00000425660 MARCH4Q9P2E8 410 aaPredicted RBP15.24■□□□□ 0.03
ACTB-204ENST00000425660 ANKRD6Q9Y2G4 727 aa15.24■□□□□ 0.03
ACTB-204ENST00000425660 STARD13Q9Y3M8 1113 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms