RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 TAS2R39P59534 338 aa26.61■■□□□ 1.85
LDB1-202ENST00000425280 OCRLQ01968 901 aa26.61■■□□□ 1.85
LDB1-202ENST00000425280 ZNF460Q14592 562 aa26.61■■□□□ 1.85
LDB1-202ENST00000425280 LACTB2Q53H82 288 aaPredicted RBP26.61■■□□□ 1.85
LDB1-202ENST00000425280 RBM20Q5T481 1227 aaKnown RBP26.61■■□□□ 1.85
LDB1-202ENST00000425280 ADGRD2Q7Z7M1 963 aa26.61■■□□□ 1.85
LDB1-202ENST00000425280 TNS4Q8IZW8 715 aa26.61■■□□□ 1.85
LDB1-202ENST00000425280 RFWD2Q8NHY2 731 aa26.61■■□□□ 1.85
LDB1-202ENST00000425280 C7orf26Q96N11 449 aa26.61■■□□□ 1.85
LDB1-202ENST00000425280 OMDQ99983 421 aa26.61■■□□□ 1.85
LDB1-202ENST00000425280 TM6SF2Q9BZW4 377 aa26.61■■□□□ 1.85
LDB1-202ENST00000425280 ABCB8Q9NUT2 735 aa26.61■■□□□ 1.85
LDB1-202ENST00000425280 USH1CQ9Y6N9 552 aa26.61■■□□□ 1.85
LDB1-202ENST00000425280 CHD9Q3L8U1 2897 aa26.6■■□□□ 1.85
LDB1-202ENST00000425280 SNNO75324 88 aaPredicted RBP26.6■■□□□ 1.85
LDB1-202ENST00000425280 TGDSO95455 350 aa26.6■■□□□ 1.85
LDB1-202ENST00000425280 SLC8A1P32418 973 aa26.6■■□□□ 1.85
LDB1-202ENST00000425280 CLCN5P51795 746 aa26.6■■□□□ 1.85
LDB1-202ENST00000425280 AP1S1P61966 158 aa26.6■■□□□ 1.85
LDB1-202ENST00000425280 POU4F1Q01851 419 aa26.6■■□□□ 1.85
LDB1-202ENST00000425280 SHHQ15465 462 aa26.6■■□□□ 1.85
LDB1-202ENST00000425280 ZNF77Q15935 545 aa26.6■■□□□ 1.85
LDB1-202ENST00000425280 C10orf107Q8IVU9 208 aa26.6■■□□□ 1.85
LDB1-202ENST00000425280 TRIM55Q9BYV6 548 aa26.6■■□□□ 1.85
LDB1-202ENST00000425280 ZNF395Q9H8N7 513 aaPredicted RBP26.6■■□□□ 1.85
LDB1-202ENST00000425280 MYOFQ9NZM1 2061 aa26.6■■□□□ 1.85
LDB1-202ENST00000425280 GLP2RO95838 553 aa26.59■■□□□ 1.85
LDB1-202ENST00000425280 PENKP01210 267 aaPredicted RBP26.59■■□□□ 1.85
LDB1-202ENST00000425280 CPA3P15088 417 aa26.59■■□□□ 1.85
LDB1-202ENST00000425280 CEBPBP17676 345 aa26.59■■□□□ 1.85
LDB1-202ENST00000425280 CRABP2P29373 138 aa26.59■■□□□ 1.85
LDB1-202ENST00000425280 STX3Q13277 289 aa26.59■■□□□ 1.85
LDB1-202ENST00000425280 GPR150Q8NGU9 434 aa26.59■■□□□ 1.85
LDB1-202ENST00000425280 CDKN2AIPNLQ96HQ2 116 aa26.59■■□□□ 1.85
LDB1-202ENST00000425280 NMRAL1Q9HBL8 299 aa26.59■■□□□ 1.85
LDB1-202ENST00000425280 YBX2Q9Y2T7 364 aaKnown RBP26.59■■□□□ 1.85
LDB1-202ENST00000425280 ACOT9Q9Y305 439 aa26.59■■□□□ 1.85
LDB1-202ENST00000425280 FZD6O60353 706 aa26.59■■□□□ 1.85
LDB1-202ENST00000425280 POU2F2P09086 479 aa26.59■■□□□ 1.85
LDB1-202ENST00000425280 HLA-FP30511 346 aa26.59■■□□□ 1.85
LDB1-202ENST00000425280 PITRM1Q5JRX3 1037 aa26.59■■□□□ 1.85
LDB1-202ENST00000425280 CENPLQ8N0S6 344 aaPredicted RBP26.59■■□□□ 1.85
LDB1-202ENST00000425280 PPP1R14CQ8TAE6 165 aa26.59■■□□□ 1.85
LDB1-202ENST00000425280 ZNF398Q8TD17 642 aa26.59■■□□□ 1.85
LDB1-202ENST00000425280 KCTD4Q8WVF5 259 aa26.59■■□□□ 1.85
LDB1-202ENST00000425280 ING5Q8WYH8 240 aa26.59■■□□□ 1.85
LDB1-202ENST00000425280 NDNQ99608 321 aa26.59■■□□□ 1.85
LDB1-202ENST00000425280 C20orf27Q9GZN8 174 aa26.59■■□□□ 1.85
LDB1-202ENST00000425280 LINC00597Q9H2U6 94 aa26.59■■□□□ 1.85
LDB1-202ENST00000425280 DPP7Q9UHL4 492 aa26.59■■□□□ 1.85
LDB1-202ENST00000425280 CD3EAPO15446 510 aaKnown RBP26.58■■□□□ 1.85
LDB1-202ENST00000425280 COL6A2P12110 1019 aa26.58■■□□□ 1.85
LDB1-202ENST00000425280 PSMA3P25788 255 aa26.58■■□□□ 1.85
LDB1-202ENST00000425280 USP4Q13107 963 aa26.58■■□□□ 1.85
LDB1-202ENST00000425280 LCA5Q86VQ0 697 aa26.58■■□□□ 1.85
LDB1-202ENST00000425280 FITM2Q8N6M3 262 aa26.58■■□□□ 1.85
LDB1-202ENST00000425280 OR4K2Q8NGD2 314 aa26.58■■□□□ 1.85
LDB1-202ENST00000425280 DCTN4Q9UJW0 460 aa26.58■■□□□ 1.85
LDB1-202ENST00000425280 C2orf81A6NN90 581 aa26.58■■□□□ 1.84
LDB1-202ENST00000425280 G3V2L1 256 aa26.58■■□□□ 1.84
LDB1-202ENST00000425280 ABL2P42684 1182 aa26.58■■□□□ 1.84
LDB1-202ENST00000425280 CTSOP43234 321 aaPredicted RBP26.58■■□□□ 1.84
LDB1-202ENST00000425280 PTPRRQ15256 657 aa26.58■■□□□ 1.84
LDB1-202ENST00000425280 ASTLQ6HA08 431 aaPredicted RBP26.58■■□□□ 1.84
LDB1-202ENST00000425280 OR6K2Q8NGY2 324 aa26.58■■□□□ 1.84
LDB1-202ENST00000425280 OR4L1Q8NH43 312 aa26.58■■□□□ 1.84
LDB1-202ENST00000425280 IRF7Q92985 503 aa26.58■■□□□ 1.84
LDB1-202ENST00000425280 OLFM1Q99784 485 aa26.58■■□□□ 1.84
LDB1-202ENST00000425280 CERS4Q9HA82 394 aa26.58■■□□□ 1.84
LDB1-202ENST00000425280 RUVBL2Q9Y230 463 aaKnown RBP26.58■■□□□ 1.84
LDB1-202ENST00000425280 PCDHB9Q9Y5E1 797 aa26.58■■□□□ 1.84
LDB1-202ENST00000425280 NEDD8-MDP1E9PL57 170 aa26.57■■□□□ 1.84
LDB1-202ENST00000425280 ZNF197O14709 1029 aa26.57■■□□□ 1.84
LDB1-202ENST00000425280 ZNF821O75541 412 aaPredicted RBP26.57■■□□□ 1.84
LDB1-202ENST00000425280 SLC20A2Q08357 652 aa26.57■■□□□ 1.84
LDB1-202ENST00000425280 SEMA3AQ14563 771 aa26.57■■□□□ 1.84
LDB1-202ENST00000425280 FUT11Q495W5 492 aa26.57■■□□□ 1.84
LDB1-202ENST00000425280 MRNIPQ6NTE8 343 aa26.57■■□□□ 1.84
LDB1-202ENST00000425280 EFHBQ8N7U6 833 aa26.57■■□□□ 1.84
LDB1-202ENST00000425280 TSNARE1Q96NA8 513 aa26.57■■□□□ 1.84
LDB1-202ENST00000425280 BBS2Q9BXC9 721 aa26.57■■□□□ 1.84
LDB1-202ENST00000425280 CATSPERZQ9NTU4 200 aa26.57■■□□□ 1.84
LDB1-202ENST00000425280 CAMSAP3Q9P1Y5 1249 aaPredicted RBP26.57■■□□□ 1.84
LDB1-202ENST00000425280 EVLQ9UI08 416 aaPredicted RBP26.57■■□□□ 1.84
LDB1-202ENST00000425280 CSNK1DP48730 415 aa26.56■■□□□ 1.84
LDB1-202ENST00000425280 SLC12A2P55011 1212 aa26.56■■□□□ 1.84
LDB1-202ENST00000425280 CBX2Q14781 532 aaPredicted RBP26.56■■□□□ 1.84
LDB1-202ENST00000425280 METTL3Q86U44 580 aaKnown RBP26.56■■□□□ 1.84
LDB1-202ENST00000425280 CAMK1DQ8IU85 385 aa26.56■■□□□ 1.84
LDB1-202ENST00000425280 ARID3BQ8IVW6 561 aaPredicted RBP26.56■■□□□ 1.84
LDB1-202ENST00000425280 KCNK13Q9HB14 408 aa26.56■■□□□ 1.84
LDB1-202ENST00000425280 SPHK2Q9NRA0 654 aa26.56■■□□□ 1.84
LDB1-202ENST00000425280 THAP1Q9NVV9 213 aa26.56■■□□□ 1.84
LDB1-202ENST00000425280 TBC1D14Q9P2M4 693 aa26.56■■□□□ 1.84
LDB1-202ENST00000425280 ZMYM5Q9UJ78 669 aa26.56■■□□□ 1.84
LDB1-202ENST00000425280 PDE4DIPQ5VU43 2346 aa26.56■■□□□ 1.84
LDB1-202ENST00000425280 DNAJC6O75061 913 aa26.56■■□□□ 1.84
LDB1-202ENST00000425280 UBOX5O94941 541 aa26.56■■□□□ 1.84
LDB1-202ENST00000425280 SLC4A1P02730 911 aa26.56■■□□□ 1.84
LDB1-202ENST00000425280 SERPINE1P05121 402 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms