RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 OR56A4Q8NGH8 313 aa6.36□□□□□ -1.39
SDCBP-203ENST00000424270 CCL4L1Q8NHW4 92 aa6.36□□□□□ -1.39
SDCBP-203ENST00000424270 DQX1Q8TE96 717 aaKnown RBP6.36□□□□□ -1.39
SDCBP-203ENST00000424270 CT55Q8WUE5 264 aa6.36□□□□□ -1.39
SDCBP-203ENST00000424270 OR1E3Q8WZA6 343 aa6.36□□□□□ -1.39
SDCBP-203ENST00000424270 DNAJC19Q96DA6 116 aa6.36□□□□□ -1.39
SDCBP-203ENST00000424270 EPSTI1Q96J88 318 aa6.36□□□□□ -1.39
SDCBP-203ENST00000424270 LLPHQ9BRT6 129 aaKnown RBP6.36□□□□□ -1.39
SDCBP-203ENST00000424270 TMUB1Q9BVT8 246 aa6.36□□□□□ -1.39
SDCBP-203ENST00000424270 NUDT9Q9BW91 350 aa6.36□□□□□ -1.39
SDCBP-203ENST00000424270 GSDMCQ9BYG8 508 aa6.36□□□□□ -1.39
SDCBP-203ENST00000424270 PANK2Q9BZ23 570 aa6.36□□□□□ -1.39
SDCBP-203ENST00000424270 TM6SF2Q9BZW4 377 aa6.36□□□□□ -1.39
SDCBP-203ENST00000424270 FAM204AQ9H8W3 233 aa6.36□□□□□ -1.39
SDCBP-203ENST00000424270 SPATS2LQ9NUQ6 558 aaKnown RBP6.36□□□□□ -1.39
SDCBP-203ENST00000424270 ARHGEF38Q9NXL2 777 aa6.36□□□□□ -1.39
SDCBP-203ENST00000424270 USP25Q9UHP3 1055 aa6.36□□□□□ -1.39
SDCBP-203ENST00000424270 VPS51Q9UID3 782 aa6.36□□□□□ -1.39
SDCBP-203ENST00000424270 VANGL2Q9ULK5 521 aa6.36□□□□□ -1.39
SDCBP-203ENST00000424270 COQ6Q9Y2Z9 468 aa6.36□□□□□ -1.39
SDCBP-203ENST00000424270 WASF2Q9Y6W5 498 aa6.36□□□□□ -1.39
SDCBP-203ENST00000424270 NIPBLQ6KC79 2804 aaeCLIP6.36□□□□□ -1.39
SDCBP-203ENST00000424270 HIVEP3Q5T1R4 2406 aa6.35□□□□□ -1.39
SDCBP-203ENST00000424270 KCNU1A8MYU2 1149 aa6.35□□□□□ -1.39
SDCBP-203ENST00000424270 C21orf140B9A014 251 aa6.35□□□□□ -1.39
SDCBP-203ENST00000424270 FANCGO15287 622 aa6.35□□□□□ -1.39
SDCBP-203ENST00000424270 EPB41L2O43491 1005 aaKnown RBP6.35□□□□□ -1.39
SDCBP-203ENST00000424270 CLDN11O75508 207 aa6.35□□□□□ -1.39
SDCBP-203ENST00000424270 UGT2B4P06133 528 aa6.35□□□□□ -1.39
SDCBP-203ENST00000424270 PLEKP08567 350 aaPredicted RBP6.35□□□□□ -1.39
SDCBP-203ENST00000424270 SETSIPP0DME0 302 aa6.35□□□□□ -1.39
SDCBP-203ENST00000424270 TIMP2P16035 220 aa6.35□□□□□ -1.39
SDCBP-203ENST00000424270 ZNF28P17035 718 aa6.35□□□□□ -1.39
SDCBP-203ENST00000424270 GKP32189 559 aa6.35□□□□□ -1.39
SDCBP-203ENST00000424270 PTGIRP43119 386 aa6.35□□□□□ -1.39
SDCBP-203ENST00000424270 RPS18P62269 152 aaKnown RBP6.35□□□□□ -1.39
SDCBP-203ENST00000424270 DLG4P78352 724 aa6.35□□□□□ -1.39
SDCBP-203ENST00000424270 PDE1BQ01064 536 aa6.35□□□□□ -1.39
SDCBP-203ENST00000424270 DPYDQ12882 1025 aa6.35□□□□□ -1.39
SDCBP-203ENST00000424270 RAPGEF1Q13905 1077 aa6.35□□□□□ -1.39
SDCBP-203ENST00000424270 UGT8Q16880 541 aa6.35□□□□□ -1.39
SDCBP-203ENST00000424270 ZNF630Q2M218 657 aaPredicted RBP6.35□□□□□ -1.39
SDCBP-203ENST00000424270 ZNF805Q5CZA5 627 aa6.35□□□□□ -1.39
SDCBP-203ENST00000424270 MIIPQ5JXC2 388 aa6.35□□□□□ -1.39
SDCBP-203ENST00000424270 CFAP58Q5T655 872 aa6.35□□□□□ -1.39
SDCBP-203ENST00000424270 PAPD7Q5XG87 772 aaKnown RBP6.35□□□□□ -1.39
SDCBP-203ENST00000424270 ARHGAP17Q68EM7 881 aa6.35□□□□□ -1.39
SDCBP-203ENST00000424270 RETSATQ6NUM9 610 aa6.35□□□□□ -1.39
SDCBP-203ENST00000424270 FOXR2Q6PJQ5 311 aa6.35□□□□□ -1.39
SDCBP-203ENST00000424270 CCDC73Q6ZRK6 1079 aa6.35□□□□□ -1.39
SDCBP-203ENST00000424270 CXXC5Q7LFL8 322 aaKnown RBP6.35□□□□□ -1.39
SDCBP-203ENST00000424270 TAC4Q86UU9 113 aa6.35□□□□□ -1.39
SDCBP-203ENST00000424270 TP53I13Q8NBR0 393 aaPredicted RBP6.35□□□□□ -1.39
SDCBP-203ENST00000424270 PARD3BQ8TEW8 1205 aa6.35□□□□□ -1.39
SDCBP-203ENST00000424270 IRGQQ8WZA9 623 aa6.35□□□□□ -1.39
SDCBP-203ENST00000424270 TM9SF4Q92544 642 aa6.35□□□□□ -1.39
SDCBP-203ENST00000424270 SGSM3Q96HU1 749 aa6.35□□□□□ -1.39
SDCBP-203ENST00000424270 KLHL32Q96NJ5 620 aa6.35□□□□□ -1.39
SDCBP-203ENST00000424270 OR6C1Q96RD1 312 aa6.35□□□□□ -1.39
SDCBP-203ENST00000424270 SPRY4Q9C004 299 aa6.35□□□□□ -1.39
SDCBP-203ENST00000424270 STN1Q9H668 368 aaKnown RBP6.35□□□□□ -1.39
SDCBP-203ENST00000424270 CARS2Q9HA77 564 aaKnown RBP6.35□□□□□ -1.39
SDCBP-203ENST00000424270 CBX8Q9HC52 389 aa6.35□□□□□ -1.39
SDCBP-203ENST00000424270 MLXIPLQ9NP71 852 aa6.35□□□□□ -1.39
SDCBP-203ENST00000424270 ST7Q9NRC1 585 aa6.35□□□□□ -1.39
SDCBP-203ENST00000424270 CISHQ9NSE2 258 aa6.35□□□□□ -1.39
SDCBP-203ENST00000424270 TAAR2Q9P1P5 351 aa6.35□□□□□ -1.39
SDCBP-203ENST00000424270 TMEM63CQ9P1W3 806 aa6.35□□□□□ -1.39
SDCBP-203ENST00000424270 DGKBQ9Y6T7 804 aa6.35□□□□□ -1.39
SDCBP-203ENST00000424270 TRBV23OR9-2A0A075B6M9 112 aa6.34□□□□□ -1.39
SDCBP-203ENST00000424270 TRGV8A0A0C4DH27 118 aa6.34□□□□□ -1.39
SDCBP-203ENST00000424270 SSU72P8A0A1W2PR75 194 aa6.34□□□□□ -1.39
SDCBP-203ENST00000424270 TEX33O43247 280 aa6.34□□□□□ -1.39
SDCBP-203ENST00000424270 TGFB1I1O43294 461 aa6.34□□□□□ -1.39
SDCBP-203ENST00000424270 THAP12O43422 761 aa6.34□□□□□ -1.39
SDCBP-203ENST00000424270 RASSF9O75901 435 aa6.34□□□□□ -1.39
SDCBP-203ENST00000424270 TMEM63AO94886 807 aa6.34□□□□□ -1.39
SDCBP-203ENST00000424270 BMP15O95972 392 aa6.34□□□□□ -1.39
SDCBP-203ENST00000424270 FGF1P05230 155 aa6.34□□□□□ -1.39
SDCBP-203ENST00000424270 SLC2A3P11169 496 aa6.34□□□□□ -1.39
SDCBP-203ENST00000424270 CCNB1P14635 433 aa6.34□□□□□ -1.39
SDCBP-203ENST00000424270 GNPDA1P46926 289 aa6.34□□□□□ -1.39
SDCBP-203ENST00000424270 RRADP55042 308 aa6.34□□□□□ -1.39
SDCBP-203ENST00000424270 SNRPFP62306 86 aaKnown RBP6.34□□□□□ -1.39
SDCBP-203ENST00000424270 POLD3Q15054 466 aaPredicted RBP6.34□□□□□ -1.39
SDCBP-203ENST00000424270 E2F4Q16254 413 aa6.34□□□□□ -1.39
SDCBP-203ENST00000424270 ZACNQ401N2 412 aa6.34□□□□□ -1.39
SDCBP-203ENST00000424270 FAM26FQ5R3K3 315 aa6.34□□□□□ -1.39
SDCBP-203ENST00000424270 FBXL22Q6P050 247 aa6.34□□□□□ -1.39
SDCBP-203ENST00000424270 SYVN1Q86TM6 617 aa6.34□□□□□ -1.39
SDCBP-203ENST00000424270 TMEM200AQ86VY9 491 aa6.34□□□□□ -1.39
SDCBP-203ENST00000424270 TGIF2LYQ8IUE0 185 aa6.34□□□□□ -1.39
SDCBP-203ENST00000424270 ZNF295-AS1Q8N0V1 137 aa6.34□□□□□ -1.39
SDCBP-203ENST00000424270 ZADH2Q8N4Q0 377 aa6.34□□□□□ -1.39
SDCBP-203ENST00000424270 PCDH20Q8N6Y1 951 aaKnown RBP6.34□□□□□ -1.39
SDCBP-203ENST00000424270 SLC4A11Q8NBS3 891 aa6.34□□□□□ -1.39
SDCBP-203ENST00000424270 OR52K2Q8NGK3 314 aa6.34□□□□□ -1.39
SDCBP-203ENST00000424270 GOLGA5Q8TBA6 731 aa6.34□□□□□ -1.39
SDCBP-203ENST00000424270 PLEKHO2Q8TD55 490 aa6.34□□□□□ -1.39
SDCBP-203ENST00000424270 CLEC4CQ8WTT0 213 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms