RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 FASP25445 335 aa15.29■□□□□ 0.04
C9orf3-204ENST00000424143 HMOX2P30519 316 aa15.29■□□□□ 0.04
C9orf3-204ENST00000424143 C1QTNF8P60827 252 aa15.29■□□□□ 0.04
C9orf3-204ENST00000424143 CTBP1Q13363 440 aa15.29■□□□□ 0.04
C9orf3-204ENST00000424143 SMAD1Q15797 465 aaKnown RBP15.29■□□□□ 0.04
C9orf3-204ENST00000424143 UGT3A2Q3SY77 523 aa15.29■□□□□ 0.04
C9orf3-204ENST00000424143 BRMS1LQ5PSV4 323 aa15.29■□□□□ 0.04
C9orf3-204ENST00000424143 TMTC4Q5T4D3 741 aa15.29■□□□□ 0.04
C9orf3-204ENST00000424143 AFMIDQ63HM1 303 aa15.29■□□□□ 0.04
C9orf3-204ENST00000424143 OTOP3Q7RTS5 596 aa15.29■□□□□ 0.04
C9orf3-204ENST00000424143 FUNDC1Q8IVP5 155 aa15.29■□□□□ 0.04
C9orf3-204ENST00000424143 ARHGAP12Q8IWW6 846 aa15.29■□□□□ 0.04
C9orf3-204ENST00000424143 MYO1HQ8N1T3 1032 aa15.29■□□□□ 0.04
C9orf3-204ENST00000424143 SMYD1Q8NB12 490 aa15.29■□□□□ 0.04
C9orf3-204ENST00000424143 RSPH1Q8WYR4 309 aa15.29■□□□□ 0.04
C9orf3-204ENST00000424143 SEPT8Q92599 483 aa15.29■□□□□ 0.04
C9orf3-204ENST00000424143 TMIGD2Q96BF3 282 aa15.29■□□□□ 0.04
C9orf3-204ENST00000424143 ISOC1Q96CN7 298 aa15.29■□□□□ 0.04
C9orf3-204ENST00000424143 MYRFLQ96LU7 910 aa15.29■□□□□ 0.04
C9orf3-204ENST00000424143 SMOQ99835 787 aa15.29■□□□□ 0.04
C9orf3-204ENST00000424143 CSNK1G1Q9HCP0 422 aa15.29■□□□□ 0.04
C9orf3-204ENST00000424143 OSER1Q9NX31 292 aa15.29■□□□□ 0.04
C9orf3-204ENST00000424143 ARHGEF38Q9NXL2 777 aa15.29■□□□□ 0.04
C9orf3-204ENST00000424143 SYNJ2BP-COX16A0A087WUM0 186 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 DHRS12A0PJE2 317 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 GOLGA8TH3BQL2 631 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 SLC7A4O43246 635 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 NCAM1P13591 858 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 ZNF12P17014 697 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 SAT1P21673 171 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 SLC7A2P52569 658 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 MERTKQ12866 999 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 ZNF829Q3KNS6 432 aaPredicted RBP15.28■□□□□ 0.04
C9orf3-204ENST00000424143 UBXN11Q5T124 520 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 ACBD5Q5T8D3 534 aaPredicted RBP15.28■□□□□ 0.04
C9orf3-204ENST00000424143 MANEALQ5VSG8 457 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 FKBP9P1Q75LS8 142 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 FAM35AQ86V20 835 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 PTRH1Q86Y79 214 aaKnown RBP15.28■□□□□ 0.04
C9orf3-204ENST00000424143 TRPV3Q8NET8 790 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 CANT1Q8WVQ1 401 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 PEX13Q92968 403 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 ZNF512Q96ME7 567 aaPredicted RBP15.28■□□□□ 0.04
C9orf3-204ENST00000424143 CIB1Q99828 191 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 MED10Q9BTT4 135 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 ADI1Q9BV57 179 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 FICDQ9BVA6 458 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 TKTL2Q9H0I9 626 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 SEMA6AQ9H2E6 1030 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 POPDC3Q9HBV1 291 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 CCDC167Q9P0B6 97 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 COX16Q9P0S2 106 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 ZNF639Q9UID6 485 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 FAF1Q9UNN5 650 aaPredicted RBP15.28■□□□□ 0.04
C9orf3-204ENST00000424143 NEU3Q9UQ49 428 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 SHROOM3Q8TF72 1996 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 GRXCR2A6NFK2 248 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 WASH4PA8MWX3 477 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 CLDN5O00501 218 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 SOCS2O14508 198 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 MAFKO60675 156 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 MMP3P08254 477 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 ZNF286BP0CG31 522 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 HNRNPLP14866 589 aaKnown RBP eCLIP15.28■□□□□ 0.041e-10■■■□□ 17.7
C9orf3-204ENST00000424143 JUNBP17275 347 aaPredicted RBP15.28■□□□□ 0.04
C9orf3-204ENST00000424143 GALK1P51570 392 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 MAP3K7CLP57077 242 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 SOX4Q06945 474 aaPredicted RBP15.28■□□□□ 0.04
C9orf3-204ENST00000424143 TNK2Q07912 1038 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 IRF5Q13568 498 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 SNX17Q15036 470 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 FXNQ16595 210 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 DUSP28Q4G0W2 176 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 ZNF678Q5SXM1 525 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 TTC33Q6PID6 262 aaPredicted RBP15.28■□□□□ 0.04
C9orf3-204ENST00000424143 CYHR1Q6ZMK1 362 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 ATPAF2Q8N5M1 289 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 FAM47BQ8NA70 645 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 BORCS5Q969J3 196 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 PLEKHG4BQ96PX9 1271 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 TRIM54Q9BYV2 358 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 CATSPERBQ9H7T0 1116 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 CRTAC1Q9NQ79 661 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 CDH9Q9ULB4 789 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 NUP205Q92621 2012 aa15.28■□□□□ 0.04
C9orf3-204ENST00000424143 POLR2AP24928 1970 aaKnown RBP15.27■□□□□ 0.04
C9orf3-204ENST00000424143 A0A1B0GTW7 788 aa15.27■□□□□ 0.03
C9orf3-204ENST00000424143 H0YAE9 185 aa15.27■□□□□ 0.03
C9orf3-204ENST00000424143 CSPG5O95196 566 aa15.27■□□□□ 0.03
C9orf3-204ENST00000424143 NPPAP01160 153 aa15.27■□□□□ 0.03
C9orf3-204ENST00000424143 IDO1P14902 403 aa15.27■□□□□ 0.03
C9orf3-204ENST00000424143 ATP6V1B2P21281 511 aa15.27■□□□□ 0.03
C9orf3-204ENST00000424143 PSMA4P25789 261 aaKnown RBP15.27■□□□□ 0.03
C9orf3-204ENST00000424143 CCT8P50990 548 aa15.27■□□□□ 0.03
C9orf3-204ENST00000424143 CSHL1Q14406 222 aa15.27■□□□□ 0.03
C9orf3-204ENST00000424143 POU6F1Q14863 301 aa15.27■□□□□ 0.03
C9orf3-204ENST00000424143 ZNF470Q6ECI4 717 aa15.27■□□□□ 0.03
C9orf3-204ENST00000424143 ABRAXAS1Q6UWZ7 409 aa15.27■□□□□ 0.03
C9orf3-204ENST00000424143 PRR23BQ6ZRT6 265 aa15.27■□□□□ 0.03
C9orf3-204ENST00000424143 USP51Q70EK9 711 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms