RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 F5H423 210 aaPredicted RBP9.73□□□□□ -0.85
HERC3-204ENST00000422770 H7C0C1 242 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 AREL1O15033 823 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 RAD51BO15315 384 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 SPINT1O43278 529 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 SH3BP5O60239 455 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 SDC3O75056 442 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 PEX11BO96011 259 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 FGGP02679 453 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 PCCBP05166 539 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 ITGAVP06756 1048 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 PYGMP11217 842 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 CYP2A6P11509 494 aaPredicted RBP9.73□□□□□ -0.85
HERC3-204ENST00000422770 C6P13671 934 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 PECAM1P16284 738 aaPredicted RBP9.73□□□□□ -0.85
HERC3-204ENST00000422770 CTPS1P17812 591 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 TGM2P21980 687 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 MMP12P39900 470 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 CTSKP43235 329 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 ATP5OP48047 213 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 ARRB1P49407 418 aaPredicted RBP9.73□□□□□ -0.85
HERC3-204ENST00000422770 PEX5P50542 639 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 THOP1P52888 689 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 TRAF2Q12933 501 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 ARHGEF7Q14155 803 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 FGL2Q14314 439 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 SUZ12Q15022 739 aaKnown RBP9.73□□□□□ -0.85
HERC3-204ENST00000422770 ACOX1Q15067 660 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 PCSK7Q16549 785 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 WHAMMP3Q1A5X7 153 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 LONRF2Q1L5Z9 754 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 TMEM259Q4ZIN3 620 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 CCDC157Q569K6 752 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 ARMC12Q5T9G4 340 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 BZW1Q7L1Q6 419 aaKnown RBP9.73□□□□□ -0.85
HERC3-204ENST00000422770 KDELC2Q7Z4H8 507 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 ZSWIM9Q86XI8 627 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 VSIG1Q86XK7 387 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 GATAD2AQ86YP4 633 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 NAXDQ8IW45 347 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 LPCAT1Q8NF37 534 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 OR13H1Q8NG92 308 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 TFB1MQ8WVM0 346 aaKnown RBP9.73□□□□□ -0.85
HERC3-204ENST00000422770 CAMK1GQ96NX5 476 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 AGAP3Q96P47 875 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 TSGA13Q96PP4 275 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 OSBPL8Q9BZF1 889 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 DNAAF2Q9NVR5 837 aaKnown RBP9.73□□□□□ -0.85
HERC3-204ENST00000422770 CDC23Q9UJX2 597 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 RAI2Q9Y5P3 530 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 FRYLO94915 3013 aa9.73□□□□□ -0.85
HERC3-204ENST00000422770 GOLGA6L10A0A0M3HER8 536 aa9.72□□□□□ -0.85
HERC3-204ENST00000422770 A0A1W2PR77 199 aa9.72□□□□□ -0.85
HERC3-204ENST00000422770 TSPAN11A1L157 253 aa9.72□□□□□ -0.85
HERC3-204ENST00000422770 POM121BA6NF01 834 aa9.72□□□□□ -0.85
HERC3-204ENST00000422770 CES2O00748 559 aa9.72□□□□□ -0.85
HERC3-204ENST00000422770 RIOK3O14730 519 aaKnown RBP9.72□□□□□ -0.85
HERC3-204ENST00000422770 GIPC1O14908 333 aa9.72□□□□□ -0.85
HERC3-204ENST00000422770 SOCS5O75159 536 aa9.72□□□□□ -0.85
HERC3-204ENST00000422770 KCNK5O95279 499 aa9.72□□□□□ -0.85
HERC3-204ENST00000422770 SLC4A1P02730 911 aa9.72□□□□□ -0.85
HERC3-204ENST00000422770 CR2P20023 1033 aa9.72□□□□□ -0.85
HERC3-204ENST00000422770 CD86P42081 329 aa9.72□□□□□ -0.85
HERC3-204ENST00000422770 PAFAH1B1P43034 410 aa9.72□□□□□ -0.85
HERC3-204ENST00000422770 TNNT3P45378 269 aaPredicted RBP9.72□□□□□ -0.85
HERC3-204ENST00000422770 LIG3P49916 1009 aa9.72□□□□□ -0.85
HERC3-204ENST00000422770 SUOXP51687 545 aa9.72□□□□□ -0.85
HERC3-204ENST00000422770 NXPH1P58417 271 aa9.72□□□□□ -0.85
HERC3-204ENST00000422770 C2orf54Q08AI8 447 aa9.72□□□□□ -0.85
HERC3-204ENST00000422770 OVGP1Q12889 678 aa9.72□□□□□ -0.85
HERC3-204ENST00000422770 ZBTB17Q13105 803 aa9.72□□□□□ -0.85
HERC3-204ENST00000422770 PDE1CQ14123 709 aaPredicted RBP9.72□□□□□ -0.85
HERC3-204ENST00000422770 LRRC14Q15048 493 aa9.72□□□□□ -0.85
HERC3-204ENST00000422770 IRF4Q15306 451 aa9.72□□□□□ -0.85
HERC3-204ENST00000422770 PPP2R5EQ16537 467 aa9.72□□□□□ -0.85
HERC3-204ENST00000422770 INAVAQ3KP66 663 aa9.72□□□□□ -0.85
HERC3-204ENST00000422770 TMEM52BQ4KMG9 183 aa9.72□□□□□ -0.85
HERC3-204ENST00000422770 ZNF542PQ5EBM4 170 aa9.72□□□□□ -0.85
HERC3-204ENST00000422770 RALGPS1Q5JS13 557 aa9.72□□□□□ -0.85
HERC3-204ENST00000422770 KDM7AQ6ZMT4 941 aa9.72□□□□□ -0.85
HERC3-204ENST00000422770 GCNT7Q6ZNI0 430 aa9.72□□□□□ -0.85
HERC3-204ENST00000422770 Q6ZSR6 202 aa9.72□□□□□ -0.85
HERC3-204ENST00000422770 USP45Q70EL2 814 aa9.72□□□□□ -0.85
HERC3-204ENST00000422770 SLC13A5Q86YT5 568 aaPredicted RBP9.72□□□□□ -0.85
HERC3-204ENST00000422770 NDUFAF2Q8N183 169 aa9.72□□□□□ -0.85
HERC3-204ENST00000422770 MNS1Q8NEH6 495 aa9.72□□□□□ -0.85
HERC3-204ENST00000422770 HCAR2Q8TDS4 363 aa9.72□□□□□ -0.85
HERC3-204ENST00000422770 RHBDD1Q8TEB9 315 aa9.72□□□□□ -0.85
HERC3-204ENST00000422770 MAML1Q92585 1016 aa9.72□□□□□ -0.85
HERC3-204ENST00000422770 ELF4Q99607 663 aaPredicted RBP9.72□□□□□ -0.85
HERC3-204ENST00000422770 FAM118BQ9BPY3 351 aa9.72□□□□□ -0.85
HERC3-204ENST00000422770 FERMT1Q9BQL6 677 aa9.72□□□□□ -0.85
HERC3-204ENST00000422770 HERPUD2Q9BSE4 406 aa9.72□□□□□ -0.85
HERC3-204ENST00000422770 DNAJC28Q9NX36 388 aa9.72□□□□□ -0.85
HERC3-204ENST00000422770 KLHL8Q9P2G9 620 aaPredicted RBP9.72□□□□□ -0.85
HERC3-204ENST00000422770 B4GALT6Q9UBX8 382 aa9.72□□□□□ -0.85
HERC3-204ENST00000422770 PHTF1Q9UMS5 762 aa9.72□□□□□ -0.85
HERC3-204ENST00000422770 CHKBQ9Y259 395 aa9.72□□□□□ -0.85
HERC3-204ENST00000422770 CEP250Q9BV73 2442 aa9.71□□□□□ -0.85
HERC3-204ENST00000422770 SPAARA0A1B0GVQ0 90 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms