RNA–Protein interactions for RNA: ENST00000422190.6

ATP2C1-203, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-203ENST00000422190 LDB2O43679 373 aa6.34□□□□□ -1.4
ATP2C1-203ENST00000422190 GOT2P00505 430 aaKnown RBP6.34□□□□□ -1.4
ATP2C1-203ENST00000422190 ATXN1LP0C7T5 689 aaKnown RBP6.34□□□□□ -1.4
ATP2C1-203ENST00000422190 ZCCHC18P0CG32 403 aa6.34□□□□□ -1.4
ATP2C1-203ENST00000422190 PRSS56P0CW18 603 aa6.34□□□□□ -1.4
ATP2C1-203ENST00000422190 DNAJB1P25685 340 aa6.34□□□□□ -1.4
ATP2C1-203ENST00000422190 PEX2P28328 305 aa6.34□□□□□ -1.4
ATP2C1-203ENST00000422190 PMLP29590 882 aa6.34□□□□□ -1.4
ATP2C1-203ENST00000422190 THOP1P52888 689 aa6.34□□□□□ -1.4
ATP2C1-203ENST00000422190 CDH13P55290 713 aa6.34□□□□□ -1.4
ATP2C1-203ENST00000422190 BTKQ06187 659 aa6.34□□□□□ -1.4
ATP2C1-203ENST00000422190 SULT2A1Q06520 285 aa6.34□□□□□ -1.4
ATP2C1-203ENST00000422190 GRAMD1BQ3KR37 738 aa6.34□□□□□ -1.4
ATP2C1-203ENST00000422190 CLEC6AQ6EIG7 209 aa6.34□□□□□ -1.4
ATP2C1-203ENST00000422190 TMEM207Q6UWW9 146 aa6.34□□□□□ -1.4
ATP2C1-203ENST00000422190 C16orf89Q6UX73 402 aa6.34□□□□□ -1.4
ATP2C1-203ENST00000422190 BNC2Q6ZN30 1099 aaPredicted RBP6.34□□□□□ -1.4
ATP2C1-203ENST00000422190 TAS1R1Q7RTX1 841 aa6.34□□□□□ -1.4
ATP2C1-203ENST00000422190 CUZD1Q86UP6 607 aa6.34□□□□□ -1.4
ATP2C1-203ENST00000422190 TMEM173Q86WV6 379 aaPredicted RBP6.34□□□□□ -1.4
ATP2C1-203ENST00000422190 TTC16Q8NEE8 873 aa6.34□□□□□ -1.4
ATP2C1-203ENST00000422190 CD99L2Q8TCZ2 262 aa6.34□□□□□ -1.4
ATP2C1-203ENST00000422190 GDPD5Q8WTR4 605 aa6.34□□□□□ -1.4
ATP2C1-203ENST00000422190 CNDP1Q96KN2 507 aa6.34□□□□□ -1.4
ATP2C1-203ENST00000422190 SERPINI1Q99574 410 aa6.34□□□□□ -1.4
ATP2C1-203ENST00000422190 YIPF3Q9GZM5 350 aa6.34□□□□□ -1.4
ATP2C1-203ENST00000422190 SCOCQ9UIL1 159 aa6.34□□□□□ -1.4
ATP2C1-203ENST00000422190 NYNRINQ9P2P1 1898 aaKnown RBP6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 PTPRDP23468 1912 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 NLRC5Q86WI3 1866 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 ATP6AP2A0A1C7CYW4 349 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 A0A1W2PQ45 241 aaPredicted RBP6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 A0A1W2PQY0 241 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 UBA6A0AVT1 1052 aaPredicted RBP6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 A6NHS1 94 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 DRGXA6NNA5 263 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 SCAMP3O14828 347 aaKnown RBP6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 ATP6AP2O75787 350 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 GLP2RO95838 553 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 XRCC1P18887 633 aaPredicted RBP6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 HDCP19113 662 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 SCNN1BP51168 640 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 RPS24P62847 133 aaKnown RBP6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 PFKPQ01813 784 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 GPR17Q13304 367 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 PPP1R3AQ16821 1122 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 GEN1Q17RS7 908 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 PARP15Q460N3 678 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 LRRC8DQ7L1W4 858 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 TEX26Q8N6G2 289 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 PCDH20Q8N6Y1 951 aaKnown RBP6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 SPPL2BQ8TCT7 592 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 JADE3Q92613 823 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 RMDN1Q96DB5 314 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 ZNF512Q96ME7 567 aaPredicted RBP6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 SMIM14Q96QK8 99 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 RANBP9Q96S59 729 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 VCXQ9H320 206 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 MFSD1Q9H3U5 465 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 WDR41Q9HAD4 459 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 EFCAB1Q9HAE3 211 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 ZBTB26Q9HCK0 441 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 MARCH5Q9NX47 278 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 IL37Q9NZH6 218 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 LOC285095A0A1B0GVY8 99 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 MROH6A6NGR9 719 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 TBKBP1A7MCY6 615 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 TXNDC9O14530 226 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 CD3EAPO15446 510 aaKnown RBP6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 ADAM12O43184 909 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 PRAMEF11O60813 436 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 NBNO60934 754 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 PAPSS2O95340 614 aaPredicted RBP6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 GJB5O95377 273 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 VNN2O95498 520 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 ALDH1A1P00352 501 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 SERPINF2P08697 491 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 LINGO3P0C6S8 592 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 HK2P52789 917 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 YBEYP58557 167 aaPredicted RBP6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 DNAJB13P59910 316 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 C1QTNF8P60827 252 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 MRPS22P82650 360 aaKnown RBP6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 MRPL58Q14197 206 aaKnown RBP6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 FLOT2Q14254 428 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 MMEL1Q495T6 779 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 AGKQ53H12 422 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 SFT2D3Q587I9 215 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 SETD3Q86TU7 594 aaPredicted RBP6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 DENND1CQ8IV53 801 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 AFAP1L2Q8N4X5 818 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 CPSF7Q8N684 471 aaKnown RBP6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 FAM156AQ8NDB6 213 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 UBXN10Q96LJ8 280 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 EBF3Q9H4W6 596 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 EML4Q9HC35 981 aaKnown RBP6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 ADA2Q9NZK5 511 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 CCDC167Q9P0B6 97 aa6.33□□□□□ -1.4
ATP2C1-203ENST00000422190 STK39Q9UEW8 545 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms