RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 LAMB3Q13751 1172 aa21.05■□□□□ 0.96
GPC1-202ENST00000420138 UGP2Q16851 508 aa21.05■□□□□ 0.96
GPC1-202ENST00000420138 LRIT3Q3SXY7 679 aa21.05■□□□□ 0.96
GPC1-202ENST00000420138 ZNF789Q5FWF6 425 aa21.05■□□□□ 0.96
GPC1-202ENST00000420138 TMEM215Q68D42 235 aa21.05■□□□□ 0.96
GPC1-202ENST00000420138 KIAA0408Q6ZU52 694 aa21.05■□□□□ 0.96
GPC1-202ENST00000420138 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.05■□□□□ 0.96
GPC1-202ENST00000420138 KIAA1958Q8N8K9 716 aa21.05■□□□□ 0.96
GPC1-202ENST00000420138 STYXQ8WUJ0 223 aa21.05■□□□□ 0.96
GPC1-202ENST00000420138 PPM1EQ8WY54 764 aa21.05■□□□□ 0.96
GPC1-202ENST00000420138 ZNF75CPQ92670 426 aaPredicted RBP21.05■□□□□ 0.96
GPC1-202ENST00000420138 FGF13Q92913 245 aa21.05■□□□□ 0.96
GPC1-202ENST00000420138 ASIC4Q96FT7 647 aa21.05■□□□□ 0.96
GPC1-202ENST00000420138 ASB16Q96NS5 453 aa21.05■□□□□ 0.96
GPC1-202ENST00000420138 TNKS2Q9H2K2 1166 aa21.05■□□□□ 0.96
GPC1-202ENST00000420138 SUDS3Q9H7L9 328 aaPredicted RBP21.05■□□□□ 0.96
GPC1-202ENST00000420138 EVLQ9UI08 416 aaPredicted RBP21.05■□□□□ 0.96
GPC1-202ENST00000420138 FBXO10Q9UK96 956 aa21.05■□□□□ 0.96
GPC1-202ENST00000420138 WDR91A4D1P6 747 aa21.04■□□□□ 0.96
GPC1-202ENST00000420138 SLC9A3R1O14745 358 aaPredicted RBP21.04■□□□□ 0.96
GPC1-202ENST00000420138 HAUS5O94927 633 aa21.04■□□□□ 0.96
GPC1-202ENST00000420138 GSRP00390 522 aa21.04■□□□□ 0.96
GPC1-202ENST00000420138 GKP32189 559 aa21.04■□□□□ 0.96
GPC1-202ENST00000420138 SERPINB4P48594 390 aa21.04■□□□□ 0.96
GPC1-202ENST00000420138 DHCR24Q15392 516 aa21.04■□□□□ 0.96
GPC1-202ENST00000420138 SEPT7Q16181 437 aaKnown RBP21.04■□□□□ 0.96
GPC1-202ENST00000420138 CGB2Q6NT52 195 aa21.04■□□□□ 0.96
GPC1-202ENST00000420138 PTAR1Q7Z6K3 402 aaPredicted RBP21.04■□□□□ 0.96
GPC1-202ENST00000420138 GPR149Q86SP6 731 aa21.04■□□□□ 0.96
GPC1-202ENST00000420138 METTL3Q86U44 580 aaKnown RBP21.04■□□□□ 0.96
GPC1-202ENST00000420138 CAMK1DQ8IU85 385 aa21.04■□□□□ 0.96
GPC1-202ENST00000420138 ADGRE3Q9BY15 652 aa21.04■□□□□ 0.96
GPC1-202ENST00000420138 RASSF4Q9H2L5 321 aa21.04■□□□□ 0.96
GPC1-202ENST00000420138 KDM4CQ9H3R0 1056 aa21.04■□□□□ 0.96
GPC1-202ENST00000420138 MARCH4Q9P2E8 410 aaPredicted RBP21.04■□□□□ 0.96
GPC1-202ENST00000420138 PCDHB9Q9Y5E1 797 aa21.04■□□□□ 0.96
GPC1-202ENST00000420138 CCT8L1PA6NM43 557 aa21.04■□□□□ 0.96
GPC1-202ENST00000420138 HTRA2O43464 458 aaPredicted RBP21.04■□□□□ 0.96
GPC1-202ENST00000420138 CYP17A1P05093 508 aa21.04■□□□□ 0.96
GPC1-202ENST00000420138 FSHRP23945 695 aa21.04■□□□□ 0.96
GPC1-202ENST00000420138 LEPRP48357 1165 aaKnown RBP21.04■□□□□ 0.96
GPC1-202ENST00000420138 LIG3P49916 1009 aa21.04■□□□□ 0.96
GPC1-202ENST00000420138 TMPRSS15P98073 1019 aa21.04■□□□□ 0.96
GPC1-202ENST00000420138 TAF1AQ15573 450 aaPredicted RBP21.04■□□□□ 0.96
GPC1-202ENST00000420138 EML3Q32P44 896 aa21.04■□□□□ 0.96
GPC1-202ENST00000420138 TRIM68Q6AZZ1 485 aa21.04■□□□□ 0.96
GPC1-202ENST00000420138 CLEC14AQ86T13 490 aa21.04■□□□□ 0.96
GPC1-202ENST00000420138 CILP2Q8IUL8 1156 aa21.04■□□□□ 0.96
GPC1-202ENST00000420138 ARMC2Q8NEN0 867 aa21.04■□□□□ 0.96
GPC1-202ENST00000420138 PDCD6IPQ8WUM4 868 aaKnown RBP21.04■□□□□ 0.96
GPC1-202ENST00000420138 OSCP1Q8WVF1 389 aa21.04■□□□□ 0.96
GPC1-202ENST00000420138 PIH1D2Q8WWB5 315 aa21.04■□□□□ 0.96
GPC1-202ENST00000420138 IQCGQ9H095 443 aaKnown RBP21.04■□□□□ 0.96
GPC1-202ENST00000420138 NLE1Q9NVX2 485 aaPredicted RBP21.04■□□□□ 0.96
GPC1-202ENST00000420138 A0A1W2PPC1 479 aa21.03■□□□□ 0.96
GPC1-202ENST00000420138 CCDC162PA2VCL2 907 aa21.03■□□□□ 0.96
GPC1-202ENST00000420138 RPP40O75818 363 aaKnown RBP21.03■□□□□ 0.96
GPC1-202ENST00000420138 PGLSO95336 258 aa21.03■□□□□ 0.96
GPC1-202ENST00000420138 CRTAMO95727 393 aa21.03■□□□□ 0.96
GPC1-202ENST00000420138 HADHAP40939 763 aa21.03■□□□□ 0.96
GPC1-202ENST00000420138 PGGT1BP53609 377 aa21.03■□□□□ 0.96
GPC1-202ENST00000420138 ZKSCAN8Q15776 578 aaPredicted RBP21.03■□□□□ 0.96
GPC1-202ENST00000420138 ANKRD54Q6NXT1 300 aa21.03■□□□□ 0.96
GPC1-202ENST00000420138 SYCE2Q6PIF2 218 aa21.03■□□□□ 0.96
GPC1-202ENST00000420138 CNSTQ6PJW8 725 aa21.03■□□□□ 0.96
GPC1-202ENST00000420138 GLT6D1Q7Z4J2 308 aa21.03■□□□□ 0.96
GPC1-202ENST00000420138 GALNT7Q86SF2 657 aa21.03■□□□□ 0.96
GPC1-202ENST00000420138 PLD6Q8N2A8 252 aaKnown RBP21.03■□□□□ 0.96
GPC1-202ENST00000420138 NAT16Q8N8M0 369 aa21.03■□□□□ 0.96
GPC1-202ENST00000420138 ZNF557Q8N988 423 aaPredicted RBP21.03■□□□□ 0.96
GPC1-202ENST00000420138 OR2AP1Q8NGE2 309 aa21.03■□□□□ 0.96
GPC1-202ENST00000420138 OR6P1Q8NGX9 317 aa21.03■□□□□ 0.96
GPC1-202ENST00000420138 CALML6Q8TD86 181 aa21.03■□□□□ 0.96
GPC1-202ENST00000420138 CCT6BQ92526 530 aa21.03■□□□□ 0.96
GPC1-202ENST00000420138 ISG20Q96AZ6 181 aaKnown RBP21.03■□□□□ 0.96
GPC1-202ENST00000420138 CDKN2AIPNLQ96HQ2 116 aa21.03■□□□□ 0.96
GPC1-202ENST00000420138 SLCO1B3Q9NPD5 702 aa21.03■□□□□ 0.96
GPC1-202ENST00000420138 FBXO6Q9NRD1 293 aaPredicted RBP21.03■□□□□ 0.96
GPC1-202ENST00000420138 DUS2Q9NX74 493 aaKnown RBP21.03■□□□□ 0.96
GPC1-202ENST00000420138 LMCD1Q9NZU5 365 aa21.03■□□□□ 0.96
GPC1-202ENST00000420138 DCDC2Q9UHG0 476 aa21.03■□□□□ 0.96
GPC1-202ENST00000420138 SLC39A10Q9ULF5 831 aa21.03■□□□□ 0.96
GPC1-202ENST00000420138 USP15Q9Y4E8 981 aaPredicted RBP21.03■□□□□ 0.96
GPC1-202ENST00000420138 PRRC2BQ5JSZ5 2229 aaKnown RBP21.03■□□□□ 0.96
GPC1-202ENST00000420138 GLRA3O75311 464 aa21.02■□□□□ 0.96
GPC1-202ENST00000420138 FSBPO95073 299 aa21.02■□□□□ 0.96
GPC1-202ENST00000420138 PIGNO95427 931 aa21.02■□□□□ 0.96
GPC1-202ENST00000420138 GOT2P00505 430 aaKnown RBP21.02■□□□□ 0.96
GPC1-202ENST00000420138 C2P06681 752 aa21.02■□□□□ 0.96
GPC1-202ENST00000420138 ABL2P42684 1182 aa21.02■□□□□ 0.96
GPC1-202ENST00000420138 CD151P48509 253 aa21.02■□□□□ 0.96
GPC1-202ENST00000420138 PRAMEP78395 509 aa21.02■□□□□ 0.96
GPC1-202ENST00000420138 MLLT1Q03111 559 aaPredicted RBP21.02■□□□□ 0.96
GPC1-202ENST00000420138 DMC1Q14565 340 aa21.02■□□□□ 0.96
GPC1-202ENST00000420138 INSCQ1MX18 579 aa21.02■□□□□ 0.96
GPC1-202ENST00000420138 LACTB2Q53H82 288 aaPredicted RBP21.02■□□□□ 0.96
GPC1-202ENST00000420138 C16orf46Q6P387 395 aa21.02■□□□□ 0.96
GPC1-202ENST00000420138 C22orf39Q6P5X5 142 aa21.02■□□□□ 0.96
GPC1-202ENST00000420138 KYAT3Q6YP21 454 aaKnown RBP21.02■□□□□ 0.96
GPC1-202ENST00000420138 TTC30BQ8N4P2 665 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms