RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 NANOS2P60321 138 aaKnown RBP3.91□□□□□ -1.78
HMGB1P11-201ENST00000413899 OLR1P78380 273 aa3.91□□□□□ -1.78
HMGB1P11-201ENST00000413899 ITGADQ13349 1161 aa3.91□□□□□ -1.78
HMGB1P11-201ENST00000413899 PPP6R3Q5H9R7 873 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P11-201ENST00000413899 EFHC1Q5JVL4 640 aa3.91□□□□□ -1.78
HMGB1P11-201ENST00000413899 MTSS1LQ765P7 747 aa3.91□□□□□ -1.78
HMGB1P11-201ENST00000413899 RSRC2Q7L4I2 434 aaKnown RBP3.91□□□□□ -1.78
HMGB1P11-201ENST00000413899 ZDHHC17Q8IUH5 632 aa3.91□□□□□ -1.78
HMGB1P11-201ENST00000413899 FBXL14Q8N1E6 418 aa3.91□□□□□ -1.78
HMGB1P11-201ENST00000413899 ZCCHC9Q8N567 271 aaKnown RBP3.91□□□□□ -1.78
HMGB1P11-201ENST00000413899 IQCF1Q8N6M8 205 aa3.91□□□□□ -1.78
HMGB1P11-201ENST00000413899 OR14A16Q8NHC5 309 aa3.91□□□□□ -1.78
HMGB1P11-201ENST00000413899 PSPC1Q8WXF1 523 aaKnown RBP3.91□□□□□ -1.78
HMGB1P11-201ENST00000413899 FAM149B1Q96BN6 582 aa3.91□□□□□ -1.78
HMGB1P11-201ENST00000413899 MARK4Q96L34 752 aa3.91□□□□□ -1.78
HMGB1P11-201ENST00000413899 LRFN5Q96NI6 719 aa3.91□□□□□ -1.78
HMGB1P11-201ENST00000413899 MAP7D2Q96T17 732 aa3.91□□□□□ -1.78
HMGB1P11-201ENST00000413899 NTPCRQ9BSD7 190 aaKnown RBP3.91□□□□□ -1.78
HMGB1P11-201ENST00000413899 SLC25A33Q9BSK2 321 aa3.91□□□□□ -1.78
HMGB1P11-201ENST00000413899 TMEM204Q9BSN7 226 aa3.91□□□□□ -1.78
HMGB1P11-201ENST00000413899 UBA5Q9GZZ9 404 aa3.91□□□□□ -1.78
HMGB1P11-201ENST00000413899 BPIFA1Q9NP55 256 aa3.91□□□□□ -1.78
HMGB1P11-201ENST00000413899 PCDHB16Q9NRJ7 776 aa3.91□□□□□ -1.78
HMGB1P11-201ENST00000413899 OLA1Q9NTK5 396 aaKnown RBP3.91□□□□□ -1.78
HMGB1P11-201ENST00000413899 ABI3Q9P2A4 366 aa3.91□□□□□ -1.78
HMGB1P11-201ENST00000413899 AASSQ9UDR5 926 aa3.91□□□□□ -1.78
HMGB1P11-201ENST00000413899 PAM16Q9Y3D7 125 aa3.91□□□□□ -1.78
HMGB1P11-201ENST00000413899 ITIH6Q6UXX5 1313 aa3.91□□□□□ -1.78
HMGB1P11-201ENST00000413899 DYTNA2CJ06 578 aa3.9□□□□□ -1.79
HMGB1P11-201ENST00000413899 J3KR12 359 aa3.9□□□□□ -1.79
HMGB1P11-201ENST00000413899 BCAT2O15382 392 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P11-201ENST00000413899 BAIAP3O94812 1187 aa3.9□□□□□ -1.79
HMGB1P11-201ENST00000413899 CCNDBP1O95273 360 aa3.9□□□□□ -1.79
HMGB1P11-201ENST00000413899 CDKN2AP42771 156 aaKnown RBP3.9□□□□□ -1.79
HMGB1P11-201ENST00000413899 RXRGP48443 463 aa3.9□□□□□ -1.79
HMGB1P11-201ENST00000413899 HNRNPA0Q13151 305 aaKnown RBP3.9□□□□□ -1.79
HMGB1P11-201ENST00000413899 OLIG2Q13516 323 aa3.9□□□□□ -1.79
HMGB1P11-201ENST00000413899 FGFBP1Q14512 234 aa3.9□□□□□ -1.79
HMGB1P11-201ENST00000413899 TBCEQ15813 527 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P11-201ENST00000413899 KRT24Q2M2I5 525 aa3.9□□□□□ -1.79
HMGB1P11-201ENST00000413899 ALG11Q2TAA5 492 aa3.9□□□□□ -1.79
HMGB1P11-201ENST00000413899 USP41Q3LFD5 358 aa3.9□□□□□ -1.79
HMGB1P11-201ENST00000413899 LCTLQ6UWM7 567 aa3.9□□□□□ -1.79
HMGB1P11-201ENST00000413899 ZNF517Q6ZMY9 492 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P11-201ENST00000413899 C1orf122Q6ZSJ8 110 aa3.9□□□□□ -1.79
HMGB1P11-201ENST00000413899 SHFQ7M4L6 423 aa3.9□□□□□ -1.79
HMGB1P11-201ENST00000413899 MAATS1Q7Z4T9 603 aa3.9□□□□□ -1.79
HMGB1P11-201ENST00000413899 TDRPQ86YL5 185 aa3.9□□□□□ -1.79
HMGB1P11-201ENST00000413899 SLC35F3Q8IY50 421 aa3.9□□□□□ -1.79
HMGB1P11-201ENST00000413899 CLIP4Q8N3C7 705 aa3.9□□□□□ -1.79
HMGB1P11-201ENST00000413899 SCCPDHQ8NBX0 429 aa3.9□□□□□ -1.79
HMGB1P11-201ENST00000413899 AGBL3Q8NEM8 1001 aa3.9□□□□□ -1.79
HMGB1P11-201ENST00000413899 ELP5Q8TE02 316 aa3.9□□□□□ -1.79
HMGB1P11-201ENST00000413899 ERGIC1Q969X5 290 aa3.9□□□□□ -1.79
HMGB1P11-201ENST00000413899 SKA1Q96BD8 255 aa3.9□□□□□ -1.79
HMGB1P11-201ENST00000413899 INTS12Q96CB8 462 aaKnown RBP3.9□□□□□ -1.79
HMGB1P11-201ENST00000413899 PABPC5Q96DU9 382 aaKnown RBP3.9□□□□□ -1.79
HMGB1P11-201ENST00000413899 SLC41A2Q96JW4 573 aa3.9□□□□□ -1.79
HMGB1P11-201ENST00000413899 ZNF570Q96NI8 536 aa3.9□□□□□ -1.79
HMGB1P11-201ENST00000413899 FAM110AQ9BQ89 295 aa3.9□□□□□ -1.79
HMGB1P11-201ENST00000413899 TKTL2Q9H0I9 626 aa3.9□□□□□ -1.79
HMGB1P11-201ENST00000413899 ZHX3Q9H4I2 956 aa3.9□□□□□ -1.79
HMGB1P11-201ENST00000413899 ESRP2Q9H6T0 727 aaKnown RBP3.9□□□□□ -1.79
HMGB1P11-201ENST00000413899 SCPEP1Q9HB40 452 aa3.9□□□□□ -1.79
HMGB1P11-201ENST00000413899 MKKSQ9NPJ1 570 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P11-201ENST00000413899 ORC3Q9UBD5 711 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P11-201ENST00000413899 HAO1Q9UJM8 370 aa3.9□□□□□ -1.79
HMGB1P11-201ENST00000413899 STON1Q9Y6Q2 735 aa3.9□□□□□ -1.79
HMGB1P11-201ENST00000413899 A0A0U1RQJ8 604 aa3.89□□□□□ -1.79
HMGB1P11-201ENST00000413899 A0A1W2PQF6 199 aa3.89□□□□□ -1.79
HMGB1P11-201ENST00000413899 CPED1A4D0V7 1026 aa3.89□□□□□ -1.79
HMGB1P11-201ENST00000413899 TMEM202A6NGA9 273 aa3.89□□□□□ -1.79
HMGB1P11-201ENST00000413899 HSPA12AO43301 675 aa3.89□□□□□ -1.79
HMGB1P11-201ENST00000413899 WDHD1O75717 1129 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P11-201ENST00000413899 DDX58O95786 925 aaKnown RBP3.89□□□□□ -1.79
HMGB1P11-201ENST00000413899 CH25HO95992 272 aa3.89□□□□□ -1.79
HMGB1P11-201ENST00000413899 DDX5P17844 614 aaKnown RBP3.89□□□□□ -1.79
HMGB1P11-201ENST00000413899 C21orf33P30042 268 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P11-201ENST00000413899 HOXA11P31270 313 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P11-201ENST00000413899 HNRNPH1P31943 449 aaKnown RBP3.89□□□□□ -1.79
HMGB1P11-201ENST00000413899 PIGAP37287 484 aa3.89□□□□□ -1.79
HMGB1P11-201ENST00000413899 RPL3P39023 403 aaKnown RBP3.89□□□□□ -1.79
HMGB1P11-201ENST00000413899 PIP4K2AP48426 406 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P11-201ENST00000413899 PCYT1AP49585 367 aa3.89□□□□□ -1.79
HMGB1P11-201ENST00000413899 RARSP54136 660 aaKnown RBP3.89□□□□□ -1.79
HMGB1P11-201ENST00000413899 RPS3AP61247 264 aaKnown RBP3.89□□□□□ -1.79
HMGB1P11-201ENST00000413899 ECT2LQ008S8 904 aa3.89□□□□□ -1.79
HMGB1P11-201ENST00000413899 TMEM115Q12893 351 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P11-201ENST00000413899 DCTN2Q13561 401 aaKnown RBP3.89□□□□□ -1.79
HMGB1P11-201ENST00000413899 FHL1Q13642 323 aa3.89□□□□□ -1.79
HMGB1P11-201ENST00000413899 NEDD9Q14511 834 aa3.89□□□□□ -1.79
HMGB1P11-201ENST00000413899 DPCR1Q3MIW9 517 aa3.89□□□□□ -1.79
HMGB1P11-201ENST00000413899 C6orf141Q5SZD1 244 aa3.89□□□□□ -1.79
HMGB1P11-201ENST00000413899 FAM69BQ5VUD6 431 aa3.89□□□□□ -1.79
HMGB1P11-201ENST00000413899 ANKRD54Q6NXT1 300 aa3.89□□□□□ -1.79
HMGB1P11-201ENST00000413899 CRELD2Q6UXH1 353 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P11-201ENST00000413899 QSOX2Q6ZRP7 698 aa3.89□□□□□ -1.79
HMGB1P11-201ENST00000413899 GLCCI1Q86VQ1 547 aa3.89□□□□□ -1.79
HMGB1P11-201ENST00000413899 WDR63Q8IWG1 891 aa3.89□□□□□ -1.79
HMGB1P11-201ENST00000413899 CNTROBQ8N137 903 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms