RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 PRR23D1E9PI22 279 aaPredicted RBP17.34■□□□□ 0.37
PHRF1-202ENST00000413872 ATG13O75143 517 aa17.34■□□□□ 0.37
PHRF1-202ENST00000413872 IFNA16P05015 189 aa17.34■□□□□ 0.37
PHRF1-202ENST00000413872 EIF2S1P05198 315 aaKnown RBP17.34■□□□□ 0.37
PHRF1-202ENST00000413872 UGT2B4P06133 528 aa17.34■□□□□ 0.37
PHRF1-202ENST00000413872 PRR23D2P0DMB1 279 aaPredicted RBP17.34■□□□□ 0.37
PHRF1-202ENST00000413872 HGSNATQ68CP4 663 aa17.34■□□□□ 0.37
PHRF1-202ENST00000413872 RHBGQ9H310 441 aa17.34■□□□□ 0.37
PHRF1-202ENST00000413872 PAPSS1O43252 624 aaPredicted RBP17.33■□□□□ 0.37
PHRF1-202ENST00000413872 MFSD11O43934 449 aa17.33■□□□□ 0.37
PHRF1-202ENST00000413872 GRB14Q14449 540 aa17.33■□□□□ 0.37
PHRF1-202ENST00000413872 PDK4Q16654 411 aa17.33■□□□□ 0.37
PHRF1-202ENST00000413872 ALFQ53S48 1182 aa17.33■□□□□ 0.37
PHRF1-202ENST00000413872 CNSTQ6PJW8 725 aa17.33■□□□□ 0.37
PHRF1-202ENST00000413872 UTP15Q8TED0 518 aaKnown RBP17.33■□□□□ 0.37
PHRF1-202ENST00000413872 GLMNQ92990 594 aa17.33■□□□□ 0.37
PHRF1-202ENST00000413872 CDRT15Q96T59 188 aa17.33■□□□□ 0.37
PHRF1-202ENST00000413872 PLK2Q9NYY3 685 aa17.33■□□□□ 0.37
PHRF1-202ENST00000413872 GTF2A1LQ9UNN4 478 aa17.33■□□□□ 0.37
PHRF1-202ENST00000413872 PTPRJQ12913 1337 aa17.33■□□□□ 0.37
PHRF1-202ENST00000413872 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.33■□□□□ 0.36
PHRF1-202ENST00000413872 PKMP14618 531 aaKnown RBP17.33■□□□□ 0.36
PHRF1-202ENST00000413872 PAICSP22234 425 aaKnown RBP17.33■□□□□ 0.36
PHRF1-202ENST00000413872 ERVK-21P61565 698 aa17.33■□□□□ 0.36
PHRF1-202ENST00000413872 CNKSR3Q6P9H4 555 aa17.33■□□□□ 0.36
PHRF1-202ENST00000413872 ERLEC1Q96DZ1 483 aa17.33■□□□□ 0.36
PHRF1-202ENST00000413872 RNF145Q96MT1 663 aa17.33■□□□□ 0.36
PHRF1-202ENST00000413872 DLGAP2Q9P1A6 1054 aa17.33■□□□□ 0.36
PHRF1-202ENST00000413872 XPR1Q9UBH6 696 aa17.33■□□□□ 0.36
PHRF1-202ENST00000413872 ATP6V1B1P15313 513 aa17.33■□□□□ 0.36
PHRF1-202ENST00000413872 TLE2Q04725 743 aa17.33■□□□□ 0.36
PHRF1-202ENST00000413872 MAPKAPK3Q16644 382 aa17.33■□□□□ 0.36
PHRF1-202ENST00000413872 FGD3Q5JSP0 725 aa17.33■□□□□ 0.36
PHRF1-202ENST00000413872 TAC4Q86UU9 113 aa17.33■□□□□ 0.36
PHRF1-202ENST00000413872 SVOPQ8N4V2 548 aa17.33■□□□□ 0.36
PHRF1-202ENST00000413872 RTL3Q8N8U3 475 aaKnown RBP17.33■□□□□ 0.36
PHRF1-202ENST00000413872 WFIKKN2Q8TEU8 576 aa17.33■□□□□ 0.36
PHRF1-202ENST00000413872 MTFMTQ96DP5 389 aaKnown RBP17.33■□□□□ 0.36
PHRF1-202ENST00000413872 FANCEQ9HB96 536 aa17.33■□□□□ 0.36
PHRF1-202ENST00000413872 PTPRHQ9HD43 1115 aa17.33■□□□□ 0.36
PHRF1-202ENST00000413872 RPS6KA6Q9UK32 745 aa17.33■□□□□ 0.36
PHRF1-202ENST00000413872 CORO1CQ9ULV4 474 aaPredicted RBP17.33■□□□□ 0.36
PHRF1-202ENST00000413872 NOL4O94818 638 aa17.33■□□□□ 0.36
PHRF1-202ENST00000413872 OR6A2O95222 327 aa17.33■□□□□ 0.36
PHRF1-202ENST00000413872 SNRPB2P08579 225 aaKnown RBP17.33■□□□□ 0.36
PHRF1-202ENST00000413872 IL5RAQ01344 420 aa17.33■□□□□ 0.36
PHRF1-202ENST00000413872 EPS8Q12929 822 aa17.33■□□□□ 0.36
PHRF1-202ENST00000413872 CAPN13Q6MZZ7 669 aaPredicted RBP17.33■□□□□ 0.36
PHRF1-202ENST00000413872 RASAL3Q86YV0 1011 aa17.33■□□□□ 0.36
PHRF1-202ENST00000413872 CPQQ9Y646 472 aa17.33■□□□□ 0.36
PHRF1-202ENST00000413872 SPEF2Q9C093 1822 aa17.32■□□□□ 0.36
PHRF1-202ENST00000413872 MATN3O15232 486 aa17.32■□□□□ 0.36
PHRF1-202ENST00000413872 EPHX1P07099 455 aa17.32■□□□□ 0.36
PHRF1-202ENST00000413872 ENO2P09104 434 aaPredicted RBP17.32■□□□□ 0.36
PHRF1-202ENST00000413872 CDKN2BP42772 138 aa17.32■□□□□ 0.36
PHRF1-202ENST00000413872 CACNG1Q06432 222 aa17.32■□□□□ 0.36
PHRF1-202ENST00000413872 IL10RBQ08334 325 aa17.32■□□□□ 0.36
PHRF1-202ENST00000413872 COL9A3Q14050 684 aaPredicted RBP17.32■□□□□ 0.36
PHRF1-202ENST00000413872 AGMOQ6ZNB7 445 aa17.32■□□□□ 0.36
PHRF1-202ENST00000413872 SLC22A17Q8WUG5 538 aa17.32■□□□□ 0.36
PHRF1-202ENST00000413872 INSL6Q9Y581 213 aa17.32■□□□□ 0.36
PHRF1-202ENST00000413872 PEAK1Q9H792 1746 aa17.32■□□□□ 0.36
PHRF1-202ENST00000413872 ROBO1Q9Y6N7 1651 aa17.32■□□□□ 0.36
PHRF1-202ENST00000413872 MYBPHLA2RUH7 354 aa17.32■□□□□ 0.36
PHRF1-202ENST00000413872 AZIN1O14977 448 aa17.32■□□□□ 0.36
PHRF1-202ENST00000413872 PPIBP23284 216 aaKnown RBP17.32■□□□□ 0.36
PHRF1-202ENST00000413872 SP100P23497 879 aaPredicted RBP17.32■□□□□ 0.36
PHRF1-202ENST00000413872 RFC2P35250 354 aa17.32■□□□□ 0.36
PHRF1-202ENST00000413872 SCNN1AP37088 669 aa17.32■□□□□ 0.36
PHRF1-202ENST00000413872 CAP1Q01518 475 aa17.32■□□□□ 0.36
PHRF1-202ENST00000413872 PRKG2Q13237 762 aa17.32■□□□□ 0.36
PHRF1-202ENST00000413872 HNRNPDQ14103 355 aaKnown RBP17.32■□□□□ 0.36
PHRF1-202ENST00000413872 CCL14Q16627 93 aa17.32■□□□□ 0.36
PHRF1-202ENST00000413872 LSM12Q3MHD2 195 aaKnown RBP17.32■□□□□ 0.36
PHRF1-202ENST00000413872 ADHFE1Q8IWW8 467 aa17.32■□□□□ 0.36
PHRF1-202ENST00000413872 POU5F2Q8N7G0 328 aa17.32■□□□□ 0.36
PHRF1-202ENST00000413872 ANGPT4Q9Y264 503 aa17.32■□□□□ 0.36
PHRF1-202ENST00000413872 OR10H2O60403 315 aa17.32■□□□□ 0.36
PHRF1-202ENST00000413872 SH3BGRLO75368 114 aa17.32■□□□□ 0.36
PHRF1-202ENST00000413872 LRIG2O94898 1065 aa17.32■□□□□ 0.36
PHRF1-202ENST00000413872 AP2A1O95782 977 aa17.32■□□□□ 0.36
PHRF1-202ENST00000413872 FYNP06241 537 aa17.32■□□□□ 0.36
PHRF1-202ENST00000413872 IDSP22304 550 aa17.32■□□□□ 0.36
PHRF1-202ENST00000413872 FAM43BQ6ZT52 329 aaPredicted RBP17.32■□□□□ 0.36
PHRF1-202ENST00000413872 KIAA0408Q6ZU52 694 aa17.32■□□□□ 0.36
PHRF1-202ENST00000413872 REEP1Q9H902 201 aa17.32■□□□□ 0.36
PHRF1-202ENST00000413872 MTF2Q9Y483 593 aaPredicted RBP17.32■□□□□ 0.36
PHRF1-202ENST00000413872 LRRC72A6NJI9 287 aa17.32■□□□□ 0.36
PHRF1-202ENST00000413872 DDX3YO15523 660 aaKnown RBP17.32■□□□□ 0.36
PHRF1-202ENST00000413872 ASLP04424 464 aa17.32■□□□□ 0.36
PHRF1-202ENST00000413872 C17orf64Q86WR6 236 aa17.32■□□□□ 0.36
PHRF1-202ENST00000413872 OSBPL10Q9BXB5 764 aa17.32■□□□□ 0.36
PHRF1-202ENST00000413872 ARHGEF4Q9NR80 690 aa17.32■□□□□ 0.36
PHRF1-202ENST00000413872 EVLQ9UI08 416 aaPredicted RBP17.32■□□□□ 0.36
PHRF1-202ENST00000413872 GSAPA4D1B5 854 aa17.31■□□□□ 0.36
PHRF1-202ENST00000413872 C2CD4BA6NLJ0 364 aa17.31■□□□□ 0.36
PHRF1-202ENST00000413872 TRAFD1O14545 582 aaPredicted RBP17.31■□□□□ 0.36
PHRF1-202ENST00000413872 PEX11AO75192 247 aa17.31■□□□□ 0.36
PHRF1-202ENST00000413872 UBE3AQ05086 875 aa17.31■□□□□ 0.36
PHRF1-202ENST00000413872 ALG11Q2TAA5 492 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms