RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 LRRC49Q8IUZ0 686 aa14.6□□□□□ -0.07
MCF2L-210ENST00000409954 BBS5Q8N3I7 341 aa14.6□□□□□ -0.07
MCF2L-210ENST00000409954 ZNF653Q96CK0 615 aa14.6□□□□□ -0.07
MCF2L-210ENST00000409954 IQCDQ96DY2 449 aa14.6□□□□□ -0.07
MCF2L-210ENST00000409954 CCDC97Q96F63 343 aaPredicted RBP14.6□□□□□ -0.07
MCF2L-210ENST00000409954 WDR92Q96MX6 357 aa14.6□□□□□ -0.07
MCF2L-210ENST00000409954 SLC46A1Q96NT5 459 aa14.6□□□□□ -0.07
MCF2L-210ENST00000409954 PEBP4Q96S96 227 aa14.6□□□□□ -0.07
MCF2L-210ENST00000409954 LGMNQ99538 433 aa14.6□□□□□ -0.07
MCF2L-210ENST00000409954 MYO1AQ9UBC5 1043 aa14.6□□□□□ -0.07
MCF2L-210ENST00000409954 GULP1Q9UBP9 304 aa14.6□□□□□ -0.07
MCF2L-210ENST00000409954 PNMA8BQ9ULN7 279 aaPredicted RBP14.6□□□□□ -0.07
MCF2L-210ENST00000409954 PCDHGA8Q9Y5G5 932 aa14.6□□□□□ -0.07
MCF2L-210ENST00000409954 RAI2Q9Y5P3 530 aa14.6□□□□□ -0.07
MCF2L-210ENST00000409954 DGKBQ9Y6T7 804 aa14.6□□□□□ -0.07
MCF2L-210ENST00000409954 TEX51A0A1B0GUA7 166 aa14.59□□□□□ -0.07
MCF2L-210ENST00000409954 CACNB4O00305 520 aaPredicted RBP14.59□□□□□ -0.07
MCF2L-210ENST00000409954 TRAFD1O14545 582 aaPredicted RBP14.59□□□□□ -0.07
MCF2L-210ENST00000409954 ATMINO43313 823 aaPredicted RBP14.59□□□□□ -0.07
MCF2L-210ENST00000409954 SKILP12757 684 aa14.59□□□□□ -0.07
MCF2L-210ENST00000409954 RGRP47804 291 aa14.59□□□□□ -0.07
MCF2L-210ENST00000409954 DPYSQ14117 519 aa14.59□□□□□ -0.07
MCF2L-210ENST00000409954 IQCB1Q15051 598 aa14.59□□□□□ -0.07
MCF2L-210ENST00000409954 DPYSL2Q16555 572 aa14.59□□□□□ -0.07
MCF2L-210ENST00000409954 ALG11Q2TAA5 492 aa14.59□□□□□ -0.07
MCF2L-210ENST00000409954 RALGPS1Q5JS13 557 aa14.59□□□□□ -0.07
MCF2L-210ENST00000409954 PERM1Q5SV97 790 aa14.59□□□□□ -0.07
MCF2L-210ENST00000409954 CYP4V2Q6ZWL3 525 aaPredicted RBP14.59□□□□□ -0.07
MCF2L-210ENST00000409954 POLNQ7Z5Q5 900 aa14.59□□□□□ -0.07
MCF2L-210ENST00000409954 SPACA3Q8IXA5 215 aa14.59□□□□□ -0.07
MCF2L-210ENST00000409954 ARL14Q8N4G2 192 aa14.59□□□□□ -0.07
MCF2L-210ENST00000409954 ARL10Q8N8L6 244 aa14.59□□□□□ -0.07
MCF2L-210ENST00000409954 NSMCE1Q8WV22 266 aa14.59□□□□□ -0.07
MCF2L-210ENST00000409954 CRELD1Q96HD1 420 aa14.59□□□□□ -0.07
MCF2L-210ENST00000409954 TRIM7Q9C029 511 aa14.59□□□□□ -0.07
MCF2L-210ENST00000409954 KLQ9UEF7 1012 aa14.59□□□□□ -0.07
MCF2L-210ENST00000409954 GPR34Q9UPC5 381 aa14.59□□□□□ -0.07
MCF2L-210ENST00000409954 ENTPD2Q9Y5L3 495 aa14.59□□□□□ -0.07
MCF2L-210ENST00000409954 WDFY3Q8IZQ1 3526 aa14.59□□□□□ -0.07
MCF2L-210ENST00000409954 TP53BP1Q12888 1972 aaPredicted RBP14.58□□□□□ -0.07
MCF2L-210ENST00000409954 TDRD6O60522 2096 aaKnown RBP14.58□□□□□ -0.08
MCF2L-210ENST00000409954 A0A1W2PQJ5 194 aa14.58□□□□□ -0.08
MCF2L-210ENST00000409954 ELFN1P0C7U0 828 aa14.58□□□□□ -0.08
MCF2L-210ENST00000409954 KIAA1024LP59773 190 aa14.58□□□□□ -0.08
MCF2L-210ENST00000409954 SLC10A7Q0GE19 358 aa14.58□□□□□ -0.08
MCF2L-210ENST00000409954 SPIDRQ14159 915 aa14.58□□□□□ -0.08
MCF2L-210ENST00000409954 CAVIN1Q6NZI2 390 aaKnown RBP14.58□□□□□ -0.08
MCF2L-210ENST00000409954 OGFOD3Q6PK18 319 aa14.58□□□□□ -0.08
MCF2L-210ENST00000409954 TMCO3Q6UWJ1 677 aa14.58□□□□□ -0.08
MCF2L-210ENST00000409954 DPPA4Q7L190 304 aa14.58□□□□□ -0.08
MCF2L-210ENST00000409954 ZSWIM9Q86XI8 627 aa14.58□□□□□ -0.08
MCF2L-210ENST00000409954 OR56A4Q8NGH8 313 aa14.58□□□□□ -0.08
MCF2L-210ENST00000409954 WDR36Q8NI36 951 aaKnown RBP14.58□□□□□ -0.08
MCF2L-210ENST00000409954 TEKT4Q8WW24 435 aa14.58□□□□□ -0.08
MCF2L-210ENST00000409954 FCRL3Q96P31 734 aaPredicted RBP14.58□□□□□ -0.08
MCF2L-210ENST00000409954 BBC3Q96PG8 261 aaPredicted RBP14.58□□□□□ -0.08
MCF2L-210ENST00000409954 RBM15Q96T37 977 aaKnown RBP eCLIP14.58□□□□□ -0.08
MCF2L-210ENST00000409954 CCDC3Q9BQI4 270 aa14.58□□□□□ -0.08
MCF2L-210ENST00000409954 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.58□□□□□ -0.08
MCF2L-210ENST00000409954 IP6K2Q9UHH9 426 aa14.58□□□□□ -0.08
MCF2L-210ENST00000409954 OR1A2Q9Y585 309 aa14.58□□□□□ -0.08
MCF2L-210ENST00000409954 LAMA5O15230 3695 aa14.57□□□□□ -0.08
MCF2L-210ENST00000409954 NTN3O00634 580 aaPredicted RBP14.57□□□□□ -0.08
MCF2L-210ENST00000409954 ATXN7O15265 892 aaPredicted RBP14.57□□□□□ -0.08
MCF2L-210ENST00000409954 HTRA2O43464 458 aaPredicted RBP14.57□□□□□ -0.08
MCF2L-210ENST00000409954 MAFKO60675 156 aa14.57□□□□□ -0.08
MCF2L-210ENST00000409954 SOCS5O75159 536 aa14.57□□□□□ -0.08
MCF2L-210ENST00000409954 PCCBP05166 539 aa14.57□□□□□ -0.08
MCF2L-210ENST00000409954 PNLIPP16233 465 aa14.57□□□□□ -0.08
MCF2L-210ENST00000409954 AMPD1P23109 780 aa14.57□□□□□ -0.08
MCF2L-210ENST00000409954 IL1R2P27930 398 aa14.57□□□□□ -0.08
MCF2L-210ENST00000409954 SERPINB6P35237 376 aa14.57□□□□□ -0.08
MCF2L-210ENST00000409954 ZNF235Q14590 738 aa14.57□□□□□ -0.08
MCF2L-210ENST00000409954 TSR1Q2NL82 804 aaKnown RBP14.57□□□□□ -0.08
MCF2L-210ENST00000409954 MARC1Q5VT66 337 aa14.57□□□□□ -0.08
MCF2L-210ENST00000409954 E4F1Q66K89 784 aaPredicted RBP14.57□□□□□ -0.08
MCF2L-210ENST00000409954 PNCKQ6P2M8 343 aa14.57□□□□□ -0.08
MCF2L-210ENST00000409954 ARHGAP36Q6ZRI8 547 aa14.57□□□□□ -0.08
MCF2L-210ENST00000409954 NDUFAF2Q8N183 169 aa14.57□□□□□ -0.08
MCF2L-210ENST00000409954 CBARPQ8N350 705 aaPredicted RBP14.57□□□□□ -0.08
MCF2L-210ENST00000409954 NPWQ8N729 165 aa14.57□□□□□ -0.08
MCF2L-210ENST00000409954 NIPA2Q8N8Q9 360 aa14.57□□□□□ -0.08
MCF2L-210ENST00000409954 KCNE4Q8WWG9 221 aa14.57□□□□□ -0.08
MCF2L-210ENST00000409954 ATXN7L3BQ96GX2 97 aa14.57□□□□□ -0.08
MCF2L-210ENST00000409954 NUDCD1Q96RS6 583 aa14.57□□□□□ -0.08
MCF2L-210ENST00000409954 ASCL3Q9NQ33 180 aa14.57□□□□□ -0.08
MCF2L-210ENST00000409954 PHTF1Q9UMS5 762 aa14.57□□□□□ -0.08
MCF2L-210ENST00000409954 SATB2Q9UPW6 733 aa14.57□□□□□ -0.08
MCF2L-210ENST00000409954 CCDC187A0A096LP49 1063 aa14.56□□□□□ -0.08
MCF2L-210ENST00000409954 MYO1FO00160 1098 aa14.56□□□□□ -0.08
MCF2L-210ENST00000409954 PRKCGP05129 697 aa14.56□□□□□ -0.08
MCF2L-210ENST00000409954 SERPING1P05155 500 aa14.56□□□□□ -0.08
MCF2L-210ENST00000409954 RARAP10276 462 aa14.56□□□□□ -0.08
MCF2L-210ENST00000409954 KRT10P13645 584 aa14.56□□□□□ -0.08
MCF2L-210ENST00000409954 CR2P20023 1033 aa14.56□□□□□ -0.08
MCF2L-210ENST00000409954 CDH6P55285 790 aa14.56□□□□□ -0.08
MCF2L-210ENST00000409954 UBASH3AP57075 661 aa14.56□□□□□ -0.08
MCF2L-210ENST00000409954 ZBED6P86452 979 aa14.56□□□□□ -0.08
MCF2L-210ENST00000409954 C19orf57Q0VDD7 668 aa14.56□□□□□ -0.08
MCF2L-210ENST00000409954 RALGDSQ12967 914 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms