RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 BPTFQ12830 3046 aa14.83□□□□□ -0.04
CBX3-203ENST00000409747 A0A1W2PQJ5 194 aa14.83□□□□□ -0.04
CBX3-203ENST00000409747 CACNB4O00305 520 aaPredicted RBP14.83□□□□□ -0.04
CBX3-203ENST00000409747 KELP23276 732 aa14.83□□□□□ -0.04
CBX3-203ENST00000409747 SCNN1BP51168 640 aa14.83□□□□□ -0.04
CBX3-203ENST00000409747 SRP54P61011 504 aaKnown RBP14.83□□□□□ -0.04
CBX3-203ENST00000409747 PIGHQ14442 188 aaPredicted RBP14.83□□□□□ -0.04
CBX3-203ENST00000409747 ZNF235Q14590 738 aa14.83□□□□□ -0.04
CBX3-203ENST00000409747 NR1I3Q14994 352 aa14.83□□□□□ -0.04
CBX3-203ENST00000409747 ALG11Q2TAA5 492 aa14.83□□□□□ -0.04
CBX3-203ENST00000409747 IGF2-ASQ6U949 168 aa14.83□□□□□ -0.04
CBX3-203ENST00000409747 TMCO3Q6UWJ1 677 aa14.83□□□□□ -0.04
CBX3-203ENST00000409747 DPPA4Q7L190 304 aa14.83□□□□□ -0.04
CBX3-203ENST00000409747 SYN2Q92777 582 aaPredicted RBP14.83□□□□□ -0.04
CBX3-203ENST00000409747 IQCDQ96DY2 449 aa14.83□□□□□ -0.04
CBX3-203ENST00000409747 CRELD1Q96HD1 420 aa14.83□□□□□ -0.04
CBX3-203ENST00000409747 PRORYQ9H606 182 aa14.83□□□□□ -0.04
CBX3-203ENST00000409747 PADI4Q9UM07 663 aa14.83□□□□□ -0.04
CBX3-203ENST00000409747 OR1A2Q9Y585 309 aa14.83□□□□□ -0.04
CBX3-203ENST00000409747 SOCS5O75159 536 aa14.82□□□□□ -0.04
CBX3-203ENST00000409747 TNFP01375 233 aa14.82□□□□□ -0.04
CBX3-203ENST00000409747 SKILP12757 684 aa14.82□□□□□ -0.04
CBX3-203ENST00000409747 SERPINB6P35237 376 aa14.82□□□□□ -0.04
CBX3-203ENST00000409747 KIAA1024LP59773 190 aa14.82□□□□□ -0.04
CBX3-203ENST00000409747 CCDC173Q0VFZ6 552 aa14.82□□□□□ -0.04
CBX3-203ENST00000409747 IQCB1Q15051 598 aa14.82□□□□□ -0.04
CBX3-203ENST00000409747 BROXQ5VW32 411 aa14.82□□□□□ -0.04
CBX3-203ENST00000409747 ARHGAP36Q6ZRI8 547 aa14.82□□□□□ -0.04
CBX3-203ENST00000409747 OR6C4Q8NGE1 309 aa14.82□□□□□ -0.04
CBX3-203ENST00000409747 PCDH19Q8TAB3 1148 aa14.82□□□□□ -0.04
CBX3-203ENST00000409747 NSMCE1Q8WV22 266 aa14.82□□□□□ -0.04
CBX3-203ENST00000409747 SPOCK2Q92563 424 aa14.82□□□□□ -0.04
CBX3-203ENST00000409747 TSACCQ96A04 125 aaPredicted RBP14.82□□□□□ -0.04
CBX3-203ENST00000409747 FCRL3Q96P31 734 aaPredicted RBP14.82□□□□□ -0.04
CBX3-203ENST00000409747 CCDC3Q9BQI4 270 aa14.82□□□□□ -0.04
CBX3-203ENST00000409747 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.82□□□□□ -0.04
CBX3-203ENST00000409747 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.82□□□□□ -0.04
CBX3-203ENST00000409747 KCTD5Q9NXV2 234 aa14.82□□□□□ -0.04
CBX3-203ENST00000409747 LRP4O75096 1905 aa14.82□□□□□ -0.04
CBX3-203ENST00000409747 TRAFD1O14545 582 aaPredicted RBP14.81□□□□□ -0.04
CBX3-203ENST00000409747 RECQL5O94762 991 aaPredicted RBP14.81□□□□□ -0.04
CBX3-203ENST00000409747 PRKCGP05129 697 aa14.81□□□□□ -0.04
CBX3-203ENST00000409747 RBMS1P29558 406 aaKnown RBP14.81□□□□□ -0.04
CBX3-203ENST00000409747 UCNP55089 124 aa14.81□□□□□ -0.04
CBX3-203ENST00000409747 TLE3Q04726 772 aa14.81□□□□□ -0.04
CBX3-203ENST00000409747 RALGDSQ12967 914 aa14.81□□□□□ -0.04
CBX3-203ENST00000409747 SPIDRQ14159 915 aa14.81□□□□□ -0.04
CBX3-203ENST00000409747 SMTNL2Q2TAL5 461 aa14.81□□□□□ -0.04
CBX3-203ENST00000409747 C3orf38Q5JPI3 329 aa14.81□□□□□ -0.04
CBX3-203ENST00000409747 PERM1Q5SV97 790 aa14.81□□□□□ -0.04
CBX3-203ENST00000409747 LIPIQ6XZB0 460 aa14.81□□□□□ -0.04
CBX3-203ENST00000409747 RD3Q7Z3Z2 195 aa14.81□□□□□ -0.04
CBX3-203ENST00000409747 POLNQ7Z5Q5 900 aa14.81□□□□□ -0.04
CBX3-203ENST00000409747 SPACA3Q8IXA5 215 aa14.81□□□□□ -0.04
CBX3-203ENST00000409747 NIPA2Q8N8Q9 360 aa14.81□□□□□ -0.04
CBX3-203ENST00000409747 TEKT4Q8WW24 435 aa14.81□□□□□ -0.04
CBX3-203ENST00000409747 HSPH1Q92598 858 aa14.81□□□□□ -0.04
CBX3-203ENST00000409747 HIC2Q96JB3 615 aa14.81□□□□□ -0.04
CBX3-203ENST00000409747 IP6K2Q9UHH9 426 aa14.81□□□□□ -0.04
CBX3-203ENST00000409747 SATB2Q9UPW6 733 aa14.81□□□□□ -0.04
CBX3-203ENST00000409747 PCDHGA8Q9Y5G5 932 aa14.81□□□□□ -0.04
CBX3-203ENST00000409747 DGKBQ9Y6T7 804 aa14.81□□□□□ -0.04
CBX3-203ENST00000409747 COL27A1Q8IZC6 1860 aaPredicted RBP14.81□□□□□ -0.04
CBX3-203ENST00000409747 CELA2BP08218 269 aaPredicted RBP14.8□□□□□ -0.04
CBX3-203ENST00000409747 HOXC4P09017 264 aaPredicted RBP14.8□□□□□ -0.04
CBX3-203ENST00000409747 IL1R2P27930 398 aa14.8□□□□□ -0.04
CBX3-203ENST00000409747 MLLT3P42568 568 aaPredicted RBP14.8□□□□□ -0.04
CBX3-203ENST00000409747 SLC10A7Q0GE19 358 aa14.8□□□□□ -0.04
CBX3-203ENST00000409747 RALGPS1Q5JS13 557 aa14.8□□□□□ -0.04
CBX3-203ENST00000409747 CRTC1Q6UUV9 634 aa14.8□□□□□ -0.04
CBX3-203ENST00000409747 ATPAF2Q8N5M1 289 aa14.8□□□□□ -0.04
CBX3-203ENST00000409747 KYQ8NBH2 561 aa14.8□□□□□ -0.04
CBX3-203ENST00000409747 OR56A4Q8NGH8 313 aa14.8□□□□□ -0.04
CBX3-203ENST00000409747 ATXN7L3BQ96GX2 97 aa14.8□□□□□ -0.04
CBX3-203ENST00000409747 CSPG4P5Q96PW8 444 aa14.8□□□□□ -0.04
CBX3-203ENST00000409747 NUDCD1Q96RS6 583 aa14.8□□□□□ -0.04
CBX3-203ENST00000409747 RBM15Q96T37 977 aaKnown RBP eCLIP14.8□□□□□ -0.042e-7■□□□□ 8.2
CBX3-203ENST00000409747 FUCA2Q9BTY2 467 aa14.8□□□□□ -0.04
CBX3-203ENST00000409747 WDR26Q9H7D7 661 aa14.8□□□□□ -0.04
CBX3-203ENST00000409747 SYNDIG1Q9H7V2 258 aa14.8□□□□□ -0.04
CBX3-203ENST00000409747 SIRPGQ9P1W8 387 aa14.8□□□□□ -0.04
CBX3-203ENST00000409747 GULP1Q9UBP9 304 aa14.8□□□□□ -0.04
CBX3-203ENST00000409747 GPR34Q9UPC5 381 aa14.8□□□□□ -0.04
CBX3-203ENST00000409747 ENTPD2Q9Y5L3 495 aa14.8□□□□□ -0.04
CBX3-203ENST00000409747 TEX51A0A1B0GUA7 166 aa14.8□□□□□ -0.04
CBX3-203ENST00000409747 PDE2AO00408 941 aaPredicted RBP14.8□□□□□ -0.04
CBX3-203ENST00000409747 TNFRSF10CO14798 259 aa14.8□□□□□ -0.04
CBX3-203ENST00000409747 SERPING1P05155 500 aa14.8□□□□□ -0.04
CBX3-203ENST00000409747 CDH6P55285 790 aa14.8□□□□□ -0.04
CBX3-203ENST00000409747 ACOX1Q15067 660 aa14.8□□□□□ -0.04
CBX3-203ENST00000409747 TSR1Q2NL82 804 aaKnown RBP14.8□□□□□ -0.04
CBX3-203ENST00000409747 HGSNATQ68CP4 663 aa14.8□□□□□ -0.04
CBX3-203ENST00000409747 GPR155Q7Z3F1 870 aa14.8□□□□□ -0.04
CBX3-203ENST00000409747 ARL14Q8N4G2 192 aa14.8□□□□□ -0.04
CBX3-203ENST00000409747 KCNE4Q8WWG9 221 aa14.8□□□□□ -0.04
CBX3-203ENST00000409747 CCDC97Q96F63 343 aaPredicted RBP14.8□□□□□ -0.04
CBX3-203ENST00000409747 PDXPQ96GD0 296 aa14.8□□□□□ -0.04
CBX3-203ENST00000409747 DPH1Q9BZG8 443 aa14.8□□□□□ -0.04
CBX3-203ENST00000409747 ASCL3Q9NQ33 180 aa14.8□□□□□ -0.04
CBX3-203ENST00000409747 RCOR3Q9P2K3 495 aaPredicted RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms