RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 C2CD6Q53TS8 623 aa16.78■□□□□ 0.28
CHMP3-203ENST00000409225 BNIPLQ7Z465 357 aa16.78■□□□□ 0.28
CHMP3-203ENST00000409225 XYLT1Q86Y38 959 aa16.78■□□□□ 0.28
CHMP3-203ENST00000409225 FUBP1Q96AE4 644 aaKnown RBP16.78■□□□□ 0.28
CHMP3-203ENST00000409225 MIB2Q96AX9 1013 aa16.78■□□□□ 0.28
CHMP3-203ENST00000409225 C18orf8Q96DM3 657 aa16.78■□□□□ 0.28
CHMP3-203ENST00000409225 RAB6CQ9H0N0 254 aa16.78■□□□□ 0.28
CHMP3-203ENST00000409225 PDCL3Q9H2J4 239 aa16.78■□□□□ 0.28
CHMP3-203ENST00000409225 CYP4F12Q9HCS2 524 aa16.78■□□□□ 0.28
CHMP3-203ENST00000409225 TMEM248Q9NWD8 314 aa16.78■□□□□ 0.28
CHMP3-203ENST00000409225 AJAP1Q9UKB5 411 aaPredicted RBP16.78■□□□□ 0.28
CHMP3-203ENST00000409225 FAM72CH0Y354 149 aa16.77■□□□□ 0.28
CHMP3-203ENST00000409225 MTSS1O43312 755 aa16.77■□□□□ 0.28
CHMP3-203ENST00000409225 PRKCGP05129 697 aa16.77■□□□□ 0.28
CHMP3-203ENST00000409225 CLCN1P35523 988 aa16.77■□□□□ 0.28
CHMP3-203ENST00000409225 SCNN1AP37088 669 aa16.77■□□□□ 0.28
CHMP3-203ENST00000409225 GABRB2P47870 512 aa16.77■□□□□ 0.28
CHMP3-203ENST00000409225 SUOXP51687 545 aa16.77■□□□□ 0.28
CHMP3-203ENST00000409225 ATP11AP98196 1134 aa16.77■□□□□ 0.28
CHMP3-203ENST00000409225 FAM72AQ5TYM5 149 aa16.77■□□□□ 0.28
CHMP3-203ENST00000409225 MANEALQ5VSG8 457 aa16.77■□□□□ 0.28
CHMP3-203ENST00000409225 FAM72DQ6L9T8 149 aa16.77■□□□□ 0.28
CHMP3-203ENST00000409225 ERAP2Q6P179 960 aa16.77■□□□□ 0.28
CHMP3-203ENST00000409225 GBP6Q6ZN66 633 aa16.77■□□□□ 0.28
CHMP3-203ENST00000409225 FAM72BQ86X60 149 aa16.77■□□□□ 0.28
CHMP3-203ENST00000409225 TMEM35BQ8NCS4 154 aa16.77■□□□□ 0.28
CHMP3-203ENST00000409225 CCDC112Q8NEF3 446 aa16.77■□□□□ 0.28
CHMP3-203ENST00000409225 KIAA1524Q8TCG1 905 aa16.77■□□□□ 0.28
CHMP3-203ENST00000409225 ABHD17AQ96GS6 310 aa16.77■□□□□ 0.28
CHMP3-203ENST00000409225 EXOC2Q96KP1 924 aa16.77■□□□□ 0.28
CHMP3-203ENST00000409225 SUDS3Q9H7L9 328 aaPredicted RBP16.77■□□□□ 0.28
CHMP3-203ENST00000409225 SPATS2LQ9NUQ6 558 aaKnown RBP16.77■□□□□ 0.28
CHMP3-203ENST00000409225 SLC39A1Q9NY26 324 aa16.77■□□□□ 0.28
CHMP3-203ENST00000409225 HOOK1Q9UJC3 728 aaKnown RBP16.77■□□□□ 0.28
CHMP3-203ENST00000409225 MFHAS1Q9Y4C4 1052 aa16.77■□□□□ 0.28
CHMP3-203ENST00000409225 SPENQ96T58 3664 aaKnown RBP16.76■□□□□ 0.27
CHMP3-203ENST00000409225 SPTBN1Q01082 2364 aaKnown RBP16.76■□□□□ 0.27
CHMP3-203ENST00000409225 ZSCAN5CA6NGD5 496 aaPredicted RBP16.76■□□□□ 0.27
CHMP3-203ENST00000409225 BMP6P22004 513 aa16.76■□□□□ 0.27
CHMP3-203ENST00000409225 MPSTP25325 297 aa16.76■□□□□ 0.27
CHMP3-203ENST00000409225 MMP12P39900 470 aa16.76■□□□□ 0.27
CHMP3-203ENST00000409225 AGERQ15109 404 aa16.76■□□□□ 0.27
CHMP3-203ENST00000409225 UGP2Q16851 508 aa16.76■□□□□ 0.27
CHMP3-203ENST00000409225 LACTB2Q53H82 288 aaPredicted RBP16.76■□□□□ 0.27
CHMP3-203ENST00000409225 NKAIN2Q5VXU1 208 aa16.76■□□□□ 0.27
CHMP3-203ENST00000409225 ATCAYQ86WG3 371 aa16.76■□□□□ 0.27
CHMP3-203ENST00000409225 CREBRFQ8IUR6 639 aa16.76■□□□□ 0.27
CHMP3-203ENST00000409225 AGBL5Q8NDL9 886 aa16.76■□□□□ 0.27
CHMP3-203ENST00000409225 ZDHHC1Q8WTX9 485 aa16.76■□□□□ 0.27
CHMP3-203ENST00000409225 TBC1D31Q96DN5 1066 aa16.76■□□□□ 0.27
CHMP3-203ENST00000409225 SLC45A3Q96JT2 553 aa16.76■□□□□ 0.27
CHMP3-203ENST00000409225 DDA1Q9BW61 102 aa16.76■□□□□ 0.27
CHMP3-203ENST00000409225 MAGEB5Q9BZ81 275 aa16.76■□□□□ 0.27
CHMP3-203ENST00000409225 KLC2Q9H0B6 622 aa16.76■□□□□ 0.27
CHMP3-203ENST00000409225 PLEKHB1Q9UF11 243 aaPredicted RBP16.76■□□□□ 0.27
CHMP3-203ENST00000409225 DACH1Q9UI36 760 aa16.76■□□□□ 0.27
CHMP3-203ENST00000409225 NEU3Q9UQ49 428 aa16.76■□□□□ 0.27
CHMP3-203ENST00000409225 ATP6V1DQ9Y5K8 247 aa16.76■□□□□ 0.27
CHMP3-203ENST00000409225 UNC79Q9P2D8 2635 aa16.76■□□□□ 0.27
CHMP3-203ENST00000409225 ICE1Q9Y2F5 2266 aa16.75■□□□□ 0.27
CHMP3-203ENST00000409225 FOXN3O00409 490 aaPredicted RBP16.75■□□□□ 0.27
CHMP3-203ENST00000409225 CAPN5O15484 640 aaPredicted RBP16.75■□□□□ 0.27
CHMP3-203ENST00000409225 ZW10O43264 779 aa16.75■□□□□ 0.27
CHMP3-203ENST00000409225 KELP23276 732 aa16.75■□□□□ 0.27
CHMP3-203ENST00000409225 CD1CP29017 333 aa16.75■□□□□ 0.27
CHMP3-203ENST00000409225 CSTF2P33240 577 aaKnown RBP eCLIP16.75■□□□□ 0.27
CHMP3-203ENST00000409225 ADRA1BP35368 520 aa16.75■□□□□ 0.27
CHMP3-203ENST00000409225 LIMK2P53671 638 aa16.75■□□□□ 0.27
CHMP3-203ENST00000409225 NRG1Q02297 640 aaPredicted RBP16.75■□□□□ 0.27
CHMP3-203ENST00000409225 CDC20Q12834 499 aa16.75■□□□□ 0.27
CHMP3-203ENST00000409225 BIRC2Q13490 618 aa16.75■□□□□ 0.27
CHMP3-203ENST00000409225 CDO1Q16878 200 aa16.75■□□□□ 0.27
CHMP3-203ENST00000409225 EXOC3L4Q17RC7 722 aa16.75■□□□□ 0.27
CHMP3-203ENST00000409225 DEFB109BQ30KR1 87 aa16.75■□□□□ 0.27
CHMP3-203ENST00000409225 CFAP58Q5T655 872 aa16.75■□□□□ 0.27
CHMP3-203ENST00000409225 ZNF438Q7Z4V0 828 aa16.75■□□□□ 0.27
CHMP3-203ENST00000409225 FAM129CQ86XR2 697 aa16.75■□□□□ 0.27
CHMP3-203ENST00000409225 NRSN1Q8IZ57 195 aa16.75■□□□□ 0.27
CHMP3-203ENST00000409225 EMC1Q8N766 993 aa16.75■□□□□ 0.27
CHMP3-203ENST00000409225 APOBEC4Q8WW27 367 aaKnown RBP16.75■□□□□ 0.27
CHMP3-203ENST00000409225 CASKIN2Q8WXE0 1202 aa16.75■□□□□ 0.27
CHMP3-203ENST00000409225 SUV39H2Q9H5I1 410 aa16.75■□□□□ 0.27
CHMP3-203ENST00000409225 RETREG1Q9H6L5 497 aa16.75■□□□□ 0.27
CHMP3-203ENST00000409225 GPN2Q9H9Y4 310 aaPredicted RBP16.75■□□□□ 0.27
CHMP3-203ENST00000409225 OCIAD1Q9NX40 245 aa16.75■□□□□ 0.27
CHMP3-203ENST00000409225 LHX3Q9UBR4 397 aa16.75■□□□□ 0.27
CHMP3-203ENST00000409225 TMEM59LQ9UK28 342 aa16.75■□□□□ 0.27
CHMP3-203ENST00000409225 DNAJC12Q9UKB3 198 aa16.75■□□□□ 0.27
CHMP3-203ENST00000409225 ARHGEF17Q96PE2 2063 aaPredicted RBP16.74■□□□□ 0.27
CHMP3-203ENST00000409225 TSPAN11A1L157 253 aa16.74■□□□□ 0.27
CHMP3-203ENST00000409225 GOLGA6L4A6NEF3 574 aa16.74■□□□□ 0.27
CHMP3-203ENST00000409225 PRR19A6NJB7 356 aa16.74■□□□□ 0.27
CHMP3-203ENST00000409225 EFCAB7A8K855 629 aa16.74■□□□□ 0.27
CHMP3-203ENST00000409225 TNFRSF10CO14798 259 aa16.74■□□□□ 0.27
CHMP3-203ENST00000409225 RECQL5O94762 991 aaPredicted RBP16.74■□□□□ 0.27
CHMP3-203ENST00000409225 LRIG2O94898 1065 aa16.74■□□□□ 0.27
CHMP3-203ENST00000409225 FGF1P05230 155 aa16.74■□□□□ 0.27
CHMP3-203ENST00000409225 PON1P27169 355 aa16.74■□□□□ 0.27
CHMP3-203ENST00000409225 OAS2P29728 719 aaKnown RBP16.74■□□□□ 0.27
CHMP3-203ENST00000409225 CDH5P33151 784 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms